RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 MYOM3Q5VTT5 1437 aa24.94■■□□□ 1.58
CLIC4-203ENST00000489758 ARHGAP5Q13017 1502 aa24.93■■□□□ 1.58
CLIC4-203ENST00000489758 EFCAB2Q5VUJ9 269 aa24.91■■□□□ 1.58
CLIC4-203ENST00000489758 CFDP1Q9UEE9 299 aaPredicted RBP24.91■■□□□ 1.58
CLIC4-203ENST00000489758 NEO1Q92859 1461 aa24.9■■□□□ 1.58
CLIC4-203ENST00000489758 CDC42BPBQ9Y5S2 1711 aa24.9■■□□□ 1.58
CLIC4-203ENST00000489758 ITSN2Q9NZM3 1697 aa24.89■■□□□ 1.58
CLIC4-203ENST00000489758 MIA2Q96PC5 1412 aa24.88■■□□□ 1.57
CLIC4-203ENST00000489758 TSPOAP1O95153 1857 aa24.88■■□□□ 1.57
CLIC4-203ENST00000489758 AKNAQ7Z591 1439 aa24.86■■□□□ 1.57
CLIC4-203ENST00000489758 FGD6Q6ZV73 1430 aa24.86■■□□□ 1.57
CLIC4-203ENST00000489758 CFAP74Q9C0B2 1584 aa24.85■■□□□ 1.57
CLIC4-203ENST00000489758 SAMD9LQ8IVG5 1584 aa24.84■■□□□ 1.57
CLIC4-203ENST00000489758 ZNF644Q9H582 1327 aaPredicted RBP24.84■■□□□ 1.57
CLIC4-203ENST00000489758 ZNF777Q9ULD5 760 aaPredicted RBP24.82■■□□□ 1.56
CLIC4-203ENST00000489758 ADGRL1O94910 1474 aa24.8■■□□□ 1.56
CLIC4-203ENST00000489758 CAMSAP2Q08AD1 1489 aa24.8■■□□□ 1.56
CLIC4-203ENST00000489758 COL17A1Q9UMD9 1497 aaPredicted RBP24.8■■□□□ 1.56
CLIC4-203ENST00000489758 ABCC1P33527 1531 aa24.8■■□□□ 1.56
CLIC4-203ENST00000489758 ARHGEF12Q9NZN5 1544 aa24.8■■□□□ 1.56
CLIC4-203ENST00000489758 TCOF1Q13428 1488 aaKnown RBP24.79■■□□□ 1.56
CLIC4-203ENST00000489758 KIAA1107Q9UPP5 1409 aa24.78■■□□□ 1.56
CLIC4-203ENST00000489758 SCAPERQ9BY12 1400 aa24.78■■□□□ 1.56
CLIC4-203ENST00000489758 PLEKHH2Q8IVE3 1493 aa24.77■■□□□ 1.56
CLIC4-203ENST00000489758 PTPN23Q9H3S7 1636 aa24.76■■□□□ 1.55
CLIC4-203ENST00000489758 KDM6BO15054 1643 aa24.75■■□□□ 1.55
CLIC4-203ENST00000489758 RRBP1Q9P2E9 1410 aaKnown RBP24.75■■□□□ 1.55
CLIC4-203ENST00000489758 MBD5Q9P267 1494 aa24.75■■□□□ 1.55
CLIC4-203ENST00000489758 SYCP2Q9BX26 1530 aa24.75■■□□□ 1.55
CLIC4-203ENST00000489758 DENND4BO75064 1496 aaPredicted RBP24.73■■□□□ 1.55
CLIC4-203ENST00000489758 HNRNPMP52272 730 aaKnown RBP eCLIP24.73■■□□□ 1.55
CLIC4-203ENST00000489758 POGZQ7Z3K3 1410 aa24.72■■□□□ 1.55
CLIC4-203ENST00000489758 TRAPPC8Q9Y2L5 1435 aa24.72■■□□□ 1.55
CLIC4-203ENST00000489758 RAPGEF3O95398 923 aa24.7■■□□□ 1.54
CLIC4-203ENST00000489758 FRMPD1Q5SYB0 1578 aa24.7■■□□□ 1.54
CLIC4-203ENST00000489758 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.68■■□□□ 1.542e-6■■□□□ 13.2
CLIC4-203ENST00000489758 FAM50AQ14320 339 aaKnown RBP24.67■■□□□ 1.54
CLIC4-203ENST00000489758 AFAP1Q8N556 730 aa24.67■■□□□ 1.54
CLIC4-203ENST00000489758 ARHGEF5Q12774 1597 aa24.67■■□□□ 1.54
CLIC4-203ENST00000489758 ZNF518AQ6AHZ1 1483 aa24.66■■□□□ 1.54
CLIC4-203ENST00000489758 RICTORQ6R327 1708 aa24.64■■□□□ 1.54
CLIC4-203ENST00000489758 KDM5CP41229 1560 aa24.64■■□□□ 1.54
CLIC4-203ENST00000489758 CCDC141Q6ZP82 1450 aa24.64■■□□□ 1.53
CLIC4-203ENST00000489758 ABCC5O15440 1437 aa24.63■■□□□ 1.53
CLIC4-203ENST00000489758 RSPH4AQ5TD94 716 aa24.63■■□□□ 1.53
CLIC4-203ENST00000489758 ZMYM4Q5VZL5 1548 aa24.61■■□□□ 1.53
CLIC4-203ENST00000489758 DAPK1P53355 1430 aa24.61■■□□□ 1.53
CLIC4-203ENST00000489758 DNMT1P26358 1616 aaKnown RBP24.59■■□□□ 1.53
CLIC4-203ENST00000489758 MLH3Q9UHC1 1453 aa24.57■■□□□ 1.52
CLIC4-203ENST00000489758 SPAG9O60271 1321 aaKnown RBP24.56■■□□□ 1.52
CLIC4-203ENST00000489758 PTPRKQ15262 1439 aa24.55■■□□□ 1.52
CLIC4-203ENST00000489758 SHANK2Q9UPX8 1470 aa24.55■■□□□ 1.52
CLIC4-203ENST00000489758 MAGI2Q86UL8 1455 aa24.54■■□□□ 1.52
CLIC4-203ENST00000489758 RTEL1-TNFRSF6BF6WH68 1400 aa24.53■■□□□ 1.52
CLIC4-203ENST00000489758 C9orf84Q5VXU9 1444 aa24.53■■□□□ 1.52
CLIC4-203ENST00000489758 ZFYVE16Q7Z3T8 1539 aa24.53■■□□□ 1.52
CLIC4-203ENST00000489758 HECW2Q9P2P5 1572 aa24.53■■□□□ 1.52
CLIC4-203ENST00000489758 INO80Q9ULG1 1556 aaPredicted RBP24.53■■□□□ 1.52
CLIC4-203ENST00000489758 MAST1Q9Y2H9 1570 aa24.52■■□□□ 1.52
CLIC4-203ENST00000489758 TSPY4P0CV99 314 aa24.52■■□□□ 1.52
CLIC4-203ENST00000489758 TSPY10P0CW01 314 aa24.52■■□□□ 1.52
CLIC4-203ENST00000489758 YEATS2Q9ULM3 1422 aa24.52■■□□□ 1.52
CLIC4-203ENST00000489758 CROCC2H7BZ55 1655 aa24.51■■□□□ 1.51
CLIC4-203ENST00000489758 ATP7AQ04656 1500 aa24.51■■□□□ 1.51
CLIC4-203ENST00000489758 KDM4FA0A1W2PPD8 638 aa24.49■■□□□ 1.51
CLIC4-203ENST00000489758 ITGAEP38570 1179 aa24.48■■□□□ 1.51
CLIC4-203ENST00000489758 KIDINS220Q9ULH0 1771 aa24.48■■□□□ 1.51
CLIC4-203ENST00000489758 ARHGEF40Q8TER5 1519 aa24.46■■□□□ 1.51
CLIC4-203ENST00000489758 ADGRL2O95490 1459 aa24.45■■□□□ 1.51
CLIC4-203ENST00000489758 CHIC2Q9UKJ5 165 aa24.45■■□□□ 1.5
CLIC4-203ENST00000489758 ABCA6Q8N139 1617 aa24.44■■□□□ 1.5
CLIC4-203ENST00000489758 MYT1LQ9UL68 1186 aa24.44■■□□□ 1.5
CLIC4-203ENST00000489758 DIP2CQ9Y2E4 1556 aa24.44■■□□□ 1.5
CLIC4-203ENST00000489758 NCOA1Q15788 1441 aa24.43■■□□□ 1.5
CLIC4-203ENST00000489758 ROCK1Q13464 1354 aa24.42■■□□□ 1.5
CLIC4-203ENST00000489758 PLXNC1O60486 1568 aa24.42■■□□□ 1.5
CLIC4-203ENST00000489758 ANKRD30AQ9BXX3 1397 aa24.41■■□□□ 1.5
CLIC4-203ENST00000489758 ATP10AO60312 1499 aa24.4■■□□□ 1.5
CLIC4-203ENST00000489758 KIF15Q9NS87 1388 aa24.38■■□□□ 1.49
CLIC4-203ENST00000489758 TRIM26Q12899 539 aaPredicted RBP24.37■■□□□ 1.49
CLIC4-203ENST00000489758 RRP7BPQ9NSQ0 103 aa24.37■■□□□ 1.49
CLIC4-203ENST00000489758 A2MP01023 1474 aa24.36■■□□□ 1.49
CLIC4-203ENST00000489758 REREQ9P2R6 1566 aa24.36■■□□□ 1.49
CLIC4-203ENST00000489758 ADGBQ8N7X0 1667 aa24.36■■□□□ 1.49
CLIC4-203ENST00000489758 DHX29Q7Z478 1369 aaKnown RBP24.35■■□□□ 1.49
CLIC4-203ENST00000489758 DUOX2Q9NRD8 1548 aa24.32■■□□□ 1.48
CLIC4-203ENST00000489758 SIGLEC1Q9BZZ2 1709 aa24.3■■□□□ 1.48
CLIC4-203ENST00000489758 HFM1A2PYH4 1435 aa24.3■■□□□ 1.48
CLIC4-203ENST00000489758 NAIPQ13075 1403 aa24.29■■□□□ 1.48
CLIC4-203ENST00000489758 AGLP35573 1532 aa24.29■■□□□ 1.48
CLIC4-203ENST00000489758 ERBINQ96RT1 1412 aa24.27■■□□□ 1.48
CLIC4-203ENST00000489758 ANKRD50Q9ULJ7 1429 aa24.26■■□□□ 1.47
CLIC4-203ENST00000489758 GCC2Q8IWJ2 1684 aa24.21■■□□□ 1.47
CLIC4-203ENST00000489758 EIF2AK4Q9P2K8 1649 aaKnown RBP24.21■■□□□ 1.47
CLIC4-203ENST00000489758 KIF3BO15066 747 aa24.2■■□□□ 1.46
CLIC4-203ENST00000489758 BCORL1Q5H9F3 1711 aa24.19■■□□□ 1.46
CLIC4-203ENST00000489758 ARID4BQ4LE39 1312 aaPredicted RBP24.19■■□□□ 1.46
CLIC4-203ENST00000489758 SETD5Q9C0A6 1442 aa24.17■■□□□ 1.46
CLIC4-203ENST00000489758 MROH1Q8NDA8 1641 aa24.14■■□□□ 1.46
CLIC4-203ENST00000489758 RNF17Q9BXT8 1623 aaKnown RBP24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms