RNA–Protein interactions for RNA: ENST00000489705.2

HNRNPU-211, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-211ENST00000489705 TMC2Q8TDI7 906 aa14.22□□□□□ -0.13
HNRNPU-211ENST00000489705 LCE2DQ5TA82 110 aaPredicted RBP14.21□□□□□ -0.13
HNRNPU-211ENST00000489705 RIMBP2O15034 1052 aa14.2□□□□□ -0.14
HNRNPU-211ENST00000489705 ST18O60284 1047 aa14.19□□□□□ -0.14
HNRNPU-211ENST00000489705 ZSWIM6Q9HCJ5 1215 aa14.18□□□□□ -0.14
HNRNPU-211ENST00000489705 C2orf72A6NCS6 295 aa14.17□□□□□ -0.14
HNRNPU-211ENST00000489705 HOXB3P14651 431 aaPredicted RBP14.17□□□□□ -0.14
HNRNPU-211ENST00000489705 POTEMA6NI47 508 aa14.14□□□□□ -0.15
HNRNPU-211ENST00000489705 ZNF710Q8N1W2 664 aa14.14□□□□□ -0.15
HNRNPU-211ENST00000489705 GPHNQ9NQX3 736 aaPredicted RBP14.14□□□□□ -0.15
HNRNPU-211ENST00000489705 POTEGQ6S5H5 508 aa14.12□□□□□ -0.15
HNRNPU-211ENST00000489705 SPRYD3Q8NCJ5 442 aa14.12□□□□□ -0.15
HNRNPU-211ENST00000489705 FOXK1P85037 733 aa14.11□□□□□ -0.15
HNRNPU-211ENST00000489705 PCDH10Q9P2E7 1040 aa14.09□□□□□ -0.15
HNRNPU-211ENST00000489705 SLC34A2O95436 690 aa14.08□□□□□ -0.16
HNRNPU-211ENST00000489705 CRISPLD2Q9H0B8 497 aa14.08□□□□□ -0.16
HNRNPU-211ENST00000489705 HOXB1P14653 301 aaPredicted RBP14.07□□□□□ -0.16
HNRNPU-211ENST00000489705 PDE4AP27815 886 aa14.07□□□□□ -0.16
HNRNPU-211ENST00000489705 EMP3P54852 163 aa14□□□□□ -0.17
HNRNPU-211ENST00000489705 DSG2Q14126 1118 aa13.99□□□□□ -0.17
HNRNPU-211ENST00000489705 GPR153Q6NV75 609 aa13.99□□□□□ -0.17
HNRNPU-211ENST00000489705 PLPP6Q8IY26 295 aa13.99□□□□□ -0.17
HNRNPU-211ENST00000489705 NCKAP5LQ9HCH0 1330 aa13.98□□□□□ -0.17
HNRNPU-211ENST00000489705 PAXIP1Q6ZW49 1069 aaPredicted RBP13.98□□□□□ -0.17
HNRNPU-211ENST00000489705 MFSD10Q14728 455 aa13.96□□□□□ -0.17
HNRNPU-211ENST00000489705 PPP1R15BQ5SWA1 713 aa13.96□□□□□ -0.17
HNRNPU-211ENST00000489705 PTCD2Q8WV60 388 aaKnown RBP13.95□□□□□ -0.18
HNRNPU-211ENST00000489705 MARVELD3Q96A59 401 aa13.95□□□□□ -0.18
HNRNPU-211ENST00000489705 CFAP44Q96MT7 982 aa13.95□□□□□ -0.18
HNRNPU-211ENST00000489705 DDX27Q96GQ7 796 aaKnown RBP13.94□□□□□ -0.18
HNRNPU-211ENST00000489705 TBC1D12O60347 775 aa13.91□□□□□ -0.18
HNRNPU-211ENST00000489705 LARP6Q9BRS8 491 aaKnown RBP13.91□□□□□ -0.18
HNRNPU-211ENST00000489705 PCDHGA4Q9Y5G9 962 aa13.91□□□□□ -0.18
HNRNPU-211ENST00000489705 ARSIQ5FYB1 569 aa13.89□□□□□ -0.19
HNRNPU-211ENST00000489705 CADPS2Q86UW7 1296 aa13.88□□□□□ -0.19
HNRNPU-211ENST00000489705 HS3ST6Q96QI5 342 aa13.87□□□□□ -0.19
HNRNPU-211ENST00000489705 ERBB3P21860 1342 aa13.87□□□□□ -0.19
HNRNPU-211ENST00000489705 FAM205CA6NFA0 338 aa13.86□□□□□ -0.19
HNRNPU-211ENST00000489705 CDAN1Q8IWY9 1227 aa13.86□□□□□ -0.19
HNRNPU-211ENST00000489705 OXER1Q8TDS5 423 aa13.84□□□□□ -0.19
HNRNPU-211ENST00000489705 PSDA5PKW4 1024 aaPredicted RBP13.83□□□□□ -0.2
HNRNPU-211ENST00000489705 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
HNRNPU-211ENST00000489705 NUDT7P0C024 238 aa13.8□□□□□ -0.2
HNRNPU-211ENST00000489705 KDM4FA0A1W2PPD8 638 aa13.78□□□□□ -0.2
HNRNPU-211ENST00000489705 CAMK2BQ13554 666 aa13.78□□□□□ -0.2
HNRNPU-211ENST00000489705 VARS2Q5ST30 1063 aaKnown RBP13.78□□□□□ -0.2
HNRNPU-211ENST00000489705 KHSRPQ92945 711 aaKnown RBP eCLIP13.77□□□□□ -0.21
HNRNPU-211ENST00000489705 ZNF687Q8N1G0 1237 aa13.76□□□□□ -0.21
HNRNPU-211ENST00000489705 POTEB3A0JP26 581 aa13.74□□□□□ -0.21
HNRNPU-211ENST00000489705 POTEBQ6S5H4 581 aa13.74□□□□□ -0.21
HNRNPU-211ENST00000489705 PLCB2Q00722 1185 aa13.73□□□□□ -0.21
HNRNPU-211ENST00000489705 UPF1Q92900 1129 aaKnown RBP eCLIP13.73□□□□□ -0.211e-8■■■□□ 14.6
HNRNPU-211ENST00000489705 WDR70Q9NW82 654 aa13.73□□□□□ -0.21
HNRNPU-211ENST00000489705 LHX6Q9UPM6 363 aa13.73□□□□□ -0.21
HNRNPU-211ENST00000489705 PBX2P40425 430 aa13.7□□□□□ -0.22
HNRNPU-211ENST00000489705 MAP3K9P80192 1104 aa13.69□□□□□ -0.22
HNRNPU-211ENST00000489705 EMILIN3Q9NT22 766 aa13.69□□□□□ -0.22
HNRNPU-211ENST00000489705 ANO8Q9HCE9 1232 aaPredicted RBP13.68□□□□□ -0.22
HNRNPU-211ENST00000489705 EVI5O60447 810 aa13.65□□□□□ -0.22
HNRNPU-211ENST00000489705 E2F4Q16254 413 aa13.65□□□□□ -0.22
HNRNPU-211ENST00000489705 PPP4R3BQ5MIZ7 849 aa13.65□□□□□ -0.22
HNRNPU-211ENST00000489705 KRTAP3-3Q9BYR6 98 aa13.65□□□□□ -0.22
HNRNPU-211ENST00000489705 KRTAP3-2Q9BYR7 98 aa13.65□□□□□ -0.22
HNRNPU-211ENST00000489705 ARIH1Q9Y4X5 557 aaPredicted RBP13.64□□□□□ -0.23
HNRNPU-211ENST00000489705 TSHZ2Q9NRE2 1034 aa13.63□□□□□ -0.23
HNRNPU-211ENST00000489705 JPH4Q96JJ6 628 aa13.6□□□□□ -0.23
HNRNPU-211ENST00000489705 SPDYE16A6NNV3 312 aaPredicted RBP13.58□□□□□ -0.24
HNRNPU-211ENST00000489705 FOSBP53539 338 aa13.57□□□□□ -0.24
HNRNPU-211ENST00000489705 KCNH8Q96L42 1107 aa13.56□□□□□ -0.24
HNRNPU-211ENST00000489705 DPYSL4O14531 572 aa13.55□□□□□ -0.24
HNRNPU-211ENST00000489705 PDIA6Q15084 440 aa13.55□□□□□ -0.24
HNRNPU-211ENST00000489705 ARHGAP33O14559 1287 aa13.54□□□□□ -0.24
HNRNPU-211ENST00000489705 PTGER2P43116 358 aa13.54□□□□□ -0.24
HNRNPU-211ENST00000489705 ZNF454Q8N9F8 522 aa13.54□□□□□ -0.24
HNRNPU-211ENST00000489705 LSM11P83369 360 aaKnown RBP eCLIP13.52□□□□□ -0.25
HNRNPU-211ENST00000489705 BCL2L12Q9HB09 334 aa13.52□□□□□ -0.25
HNRNPU-211ENST00000489705 PHF14O94880 888 aa13.51□□□□□ -0.25
HNRNPU-211ENST00000489705 P3H3Q8IVL6 736 aa13.51□□□□□ -0.25
HNRNPU-211ENST00000489705 SPNS2Q8IVW8 549 aa13.51□□□□□ -0.25
HNRNPU-211ENST00000489705 FBXW7Q969H0 707 aa13.51□□□□□ -0.25
HNRNPU-211ENST00000489705 PLSCR2Q9NRY7 297 aa13.51□□□□□ -0.25
HNRNPU-211ENST00000489705 ZDHHC16Q969W1 377 aa13.5□□□□□ -0.25
HNRNPU-211ENST00000489705 EPAS1Q99814 870 aa13.49□□□□□ -0.25
HNRNPU-211ENST00000489705 POTEEQ6S8J3 1075 aa13.47□□□□□ -0.25
HNRNPU-211ENST00000489705 ARHGEF1Q92888 912 aaKnown RBP13.47□□□□□ -0.25
HNRNPU-211ENST00000489705 TK2O00142 265 aa13.46□□□□□ -0.25
HNRNPU-211ENST00000489705 TYW1BQ6NUM6 668 aa13.46□□□□□ -0.25
HNRNPU-211ENST00000489705 PTPREP23469 700 aa13.45□□□□□ -0.26
HNRNPU-211ENST00000489705 PCDHGA10Q9Y5H3 936 aa13.45□□□□□ -0.26
HNRNPU-211ENST00000489705 HAP1P54257 671 aaPredicted RBP13.44□□□□□ -0.26
HNRNPU-211ENST00000489705 MMRN1Q13201 1228 aa13.41□□□□□ -0.26
HNRNPU-211ENST00000489705 KCNK17Q96T54 332 aa13.41□□□□□ -0.26
HNRNPU-211ENST00000489705 SLC4A5Q9BY07 1137 aa13.41□□□□□ -0.26
HNRNPU-211ENST00000489705 AXIN2Q9Y2T1 843 aa13.41□□□□□ -0.26
HNRNPU-211ENST00000489705 ANKRD13DQ6ZTN6 518 aa13.4□□□□□ -0.26
HNRNPU-211ENST00000489705 KCNV2Q8TDN2 545 aa13.4□□□□□ -0.26
HNRNPU-211ENST00000489705 ADAM33Q9BZ11 813 aa13.39□□□□□ -0.27
HNRNPU-211ENST00000489705 PSEN2P49810 448 aa13.37□□□□□ -0.27
HNRNPU-211ENST00000489705 ADGRD1Q6QNK2 874 aa13.37□□□□□ -0.27
HNRNPU-211ENST00000489705 PPP1R3GB7ZBB8 358 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms