RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 NEUROD1Q13562 356 aa15.25■□□□□ 0.03
ABCD4-214ENST00000489678 TSPOAP1O95153 1857 aa15.24■□□□□ 0.03
ABCD4-214ENST00000489678 TTC37Q6PGP7 1564 aa15.24■□□□□ 0.03
ABCD4-214ENST00000489678 GPATCH8Q9UKJ3 1502 aaKnown RBP15.24■□□□□ 0.03
ABCD4-214ENST00000489678 CFAP43Q8NDM7 1665 aa15.24■□□□□ 0.03
ABCD4-214ENST00000489678 ARHGAP5Q13017 1502 aa15.23■□□□□ 0.03
ABCD4-214ENST00000489678 KDM5BQ9UGL1 1544 aa15.22■□□□□ 0.03
ABCD4-214ENST00000489678 EHBP1L1Q8N3D4 1523 aa15.21■□□□□ 0.03
ABCD4-214ENST00000489678 WDR7Q9Y4E6 1490 aa15.21■□□□□ 0.03
ABCD4-214ENST00000489678 TSPY4P0CV99 314 aa15.2■□□□□ 0.02
ABCD4-214ENST00000489678 TSPY10P0CW01 314 aa15.2■□□□□ 0.02
ABCD4-214ENST00000489678 EFCAB2Q5VUJ9 269 aa15.2■□□□□ 0.02
ABCD4-214ENST00000489678 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.2■□□□□ 0.02
ABCD4-214ENST00000489678 CD109Q6YHK3 1445 aa15.19■□□□□ 0.02
ABCD4-214ENST00000489678 SUPT6HQ7KZ85 1726 aaKnown RBP15.19■□□□□ 0.02
ABCD4-214ENST00000489678 SIN3AQ96ST3 1273 aa15.18■□□□□ 0.02
ABCD4-214ENST00000489678 RAB3GAP2Q9H2M9 1393 aa15.16■□□□□ 0.02
ABCD4-214ENST00000489678 RRBP1Q9P2E9 1410 aaKnown RBP15.16■□□□□ 0.02
ABCD4-214ENST00000489678 TRAPPC8Q9Y2L5 1435 aa15.15■□□□□ 0.02
ABCD4-214ENST00000489678 GGT6Q6P531 493 aa15.15■□□□□ 0.02
ABCD4-214ENST00000489678 SCAPERQ9BY12 1400 aa15.15■□□□□ 0.02
ABCD4-214ENST00000489678 CAMSAP2Q08AD1 1489 aa15.14■□□□□ 0.01
ABCD4-214ENST00000489678 PTPN23Q9H3S7 1636 aa15.13■□□□□ 0.01
ABCD4-214ENST00000489678 ABCC10Q5T3U5 1492 aa15.13■□□□□ 0.01
ABCD4-214ENST00000489678 SYCP2Q9BX26 1530 aa15.12■□□□□ 0.01
ABCD4-214ENST00000489678 ARHGEF12Q9NZN5 1544 aa15.12■□□□□ 0.01
ABCD4-214ENST00000489678 FANCAO15360 1455 aa15.12■□□□□ 0.01
ABCD4-214ENST00000489678 ABCC5O15440 1437 aa15.11■□□□□ 0.01
ABCD4-214ENST00000489678 UHRF1BP1LA0JNW5 1464 aa15.11■□□□□ 0.01
ABCD4-214ENST00000489678 SPAG9O60271 1321 aaKnown RBP15.1■□□□□ 0.01
ABCD4-214ENST00000489678 ARID4BQ4LE39 1312 aaPredicted RBP15.1■□□□□ 0.01
ABCD4-214ENST00000489678 MAP3K1Q13233 1512 aa15.09■□□□□ 0.01
ABCD4-214ENST00000489678 KIF3BO15066 747 aa15.09■□□□□ 0.01
ABCD4-214ENST00000489678 DIEXFQ68CQ4 756 aaKnown RBP15.09■□□□□ 0.01
ABCD4-214ENST00000489678 DAPK1P53355 1430 aa15.07■□□□□ 0
ABCD4-214ENST00000489678 CDC42BPAQ5VT25 1732 aa15.07■□□□□ 0
ABCD4-214ENST00000489678 PLCH2O75038 1416 aa15.06■□□□□ 0
ABCD4-214ENST00000489678 ADGRL1O94910 1474 aa15.06■□□□□ 0
ABCD4-214ENST00000489678 DHX57Q6P158 1386 aaKnown RBP15.06■□□□□ 0
ABCD4-214ENST00000489678 KDM6BO15054 1643 aa15.05■□□□□ 0
ABCD4-214ENST00000489678 ZNF326Q5BKZ1 582 aaKnown RBP15.05■□□□□ -0
ABCD4-214ENST00000489678 SLC4A1APQ9BWU0 796 aaKnown RBP15.05■□□□□ -0
ABCD4-214ENST00000489678 CDC42BPBQ9Y5S2 1711 aa15.05■□□□□ -0
ABCD4-214ENST00000489678 HIRIP3Q9BW71 556 aaPredicted RBP15.04■□□□□ -0
ABCD4-214ENST00000489678 SAMD9LQ8IVG5 1584 aa15.04■□□□□ -0
ABCD4-214ENST00000489678 ZNF316A6NFI3 1004 aaPredicted RBP15.04■□□□□ -0
ABCD4-214ENST00000489678 AKNAQ7Z591 1439 aa15.04■□□□□ -0
ABCD4-214ENST00000489678 COL17A1Q9UMD9 1497 aaPredicted RBP15.03■□□□□ -0
ABCD4-214ENST00000489678 C9orf84Q5VXU9 1444 aa15.02■□□□□ -0
ABCD4-214ENST00000489678 KIF15Q9NS87 1388 aa15.02■□□□□ -0
ABCD4-214ENST00000489678 SETD5Q9C0A6 1442 aa15.02□□□□□ -0.01
ABCD4-214ENST00000489678 RGL3Q3MIN7 710 aa15□□□□□ -0.01
ABCD4-214ENST00000489678 NAIPQ13075 1403 aa15□□□□□ -0.01
ABCD4-214ENST00000489678 NUTM2DQ5VT03 806 aaPredicted RBP15□□□□□ -0.01
ABCD4-214ENST00000489678 YEATS2Q9ULM3 1422 aa14.99□□□□□ -0.01
ABCD4-214ENST00000489678 MBD5Q9P267 1494 aa14.99□□□□□ -0.01
ABCD4-214ENST00000489678 NUP155O75694 1391 aa14.98□□□□□ -0.01
ABCD4-214ENST00000489678 MIA2Q96PC5 1412 aa14.98□□□□□ -0.01
ABCD4-214ENST00000489678 PKD2Q13563 968 aa14.98□□□□□ -0.01
ABCD4-214ENST00000489678 CHGAP10645 457 aaKnown RBP14.97□□□□□ -0.01
ABCD4-214ENST00000489678 PLEKHH2Q8IVE3 1493 aa14.97□□□□□ -0.01
ABCD4-214ENST00000489678 CLSPNQ9HAW4 1339 aa14.97□□□□□ -0.01
ABCD4-214ENST00000489678 MPHOSPH9Q99550 1183 aa14.96□□□□□ -0.01
ABCD4-214ENST00000489678 MYO5CQ9NQX4 1742 aa14.96□□□□□ -0.02
ABCD4-214ENST00000489678 NCOA1Q15788 1441 aa14.96□□□□□ -0.02
ABCD4-214ENST00000489678 KDM2AQ9Y2K7 1162 aa14.95□□□□□ -0.02
ABCD4-214ENST00000489678 CEBPAP49715 358 aaPredicted RBP14.95□□□□□ -0.02
ABCD4-214ENST00000489678 ANKRD30AQ9BXX3 1397 aa14.95□□□□□ -0.02
ABCD4-214ENST00000489678 DIP2BQ9P265 1576 aa14.94□□□□□ -0.02
ABCD4-214ENST00000489678 ANKRD50Q9ULJ7 1429 aa14.94□□□□□ -0.02
ABCD4-214ENST00000489678 PREX2Q70Z35 1606 aa14.93□□□□□ -0.02
ABCD4-214ENST00000489678 CCDC141Q6ZP82 1450 aa14.93□□□□□ -0.02
ABCD4-214ENST00000489678 CFAP65Q6ZU64 1925 aaKnown RBP14.9□□□□□ -0.02
ABCD4-214ENST00000489678 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
ABCD4-214ENST00000489678 MAPKBP1O60336 1514 aa14.9□□□□□ -0.02
ABCD4-214ENST00000489678 TCOF1Q13428 1488 aaKnown RBP14.9□□□□□ -0.02
ABCD4-214ENST00000489678 ABCA9Q8IUA7 1624 aa14.89□□□□□ -0.03
ABCD4-214ENST00000489678 FBXO31Q5XUX0 539 aaPredicted RBP14.89□□□□□ -0.03
ABCD4-214ENST00000489678 ITSN2Q9NZM3 1697 aa14.89□□□□□ -0.03
ABCD4-214ENST00000489678 CNGB1Q14028 1251 aaPredicted RBP14.88□□□□□ -0.03
ABCD4-214ENST00000489678 DENND4BO75064 1496 aaPredicted RBP14.88□□□□□ -0.03
ABCD4-214ENST00000489678 HFM1A2PYH4 1435 aa14.88□□□□□ -0.03
ABCD4-214ENST00000489678 WASHC2CQ9Y4E1 1318 aa14.87□□□□□ -0.03
ABCD4-214ENST00000489678 ABCC1P33527 1531 aa14.87□□□□□ -0.03
ABCD4-214ENST00000489678 DNMT1P26358 1616 aaKnown RBP14.86□□□□□ -0.03
ABCD4-214ENST00000489678 KIF13AQ9H1H9 1805 aa14.86□□□□□ -0.03
ABCD4-214ENST00000489678 POGZQ7Z3K3 1410 aa14.83□□□□□ -0.04
ABCD4-214ENST00000489678 ACIN1Q9UKV3 1341 aaKnown RBP14.82□□□□□ -0.04
ABCD4-214ENST00000489678 MIER1Q8N108 512 aa14.82□□□□□ -0.04
ABCD4-214ENST00000489678 ESF1Q9H501 851 aaKnown RBP14.81□□□□□ -0.04
ABCD4-214ENST00000489678 ZNF518AQ6AHZ1 1483 aa14.8□□□□□ -0.04
ABCD4-214ENST00000489678 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.8□□□□□ -0.04
ABCD4-214ENST00000489678 RSPH4AQ5TD94 716 aa14.79□□□□□ -0.04
ABCD4-214ENST00000489678 KIAA1107Q9UPP5 1409 aa14.79□□□□□ -0.04
ABCD4-214ENST00000489678 POLR3GLQ9BT43 218 aa14.79□□□□□ -0.04
ABCD4-214ENST00000489678 ATP7AQ04656 1500 aa14.78□□□□□ -0.04
ABCD4-214ENST00000489678 MAP3K4Q9Y6R4 1608 aa14.78□□□□□ -0.04
ABCD4-214ENST00000489678 PPRC1Q5VV67 1664 aaKnown RBP14.77□□□□□ -0.05
ABCD4-214ENST00000489678 L3MBTL2Q969R5 705 aa14.76□□□□□ -0.05
ABCD4-214ENST00000489678 ZFYVE16Q7Z3T8 1539 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms