RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 FBXO22Q8NEZ5 403 aa11.7□□□□□ -0.54
PDCD4-209ENST00000489049 RGL2O15211 777 aa11.69□□□□□ -0.54
PDCD4-209ENST00000489049 DOK7Q18PE1 504 aa11.69□□□□□ -0.54
PDCD4-209ENST00000489049 FAM205CA6NFA0 338 aa11.67□□□□□ -0.54
PDCD4-209ENST00000489049 ZNF710Q8N1W2 664 aa11.67□□□□□ -0.54
PDCD4-209ENST00000489049 HS3ST6Q96QI5 342 aa11.67□□□□□ -0.54
PDCD4-209ENST00000489049 POTEB3A0JP26 581 aa11.66□□□□□ -0.54
PDCD4-209ENST00000489049 POTEBQ6S5H4 581 aa11.66□□□□□ -0.54
PDCD4-209ENST00000489049 MFRPQ9BY79 579 aa11.66□□□□□ -0.54
PDCD4-209ENST00000489049 SHROOM4Q9ULL8 1493 aa11.65□□□□□ -0.54
PDCD4-209ENST00000489049 HOXB1P14653 301 aaPredicted RBP11.65□□□□□ -0.54
PDCD4-209ENST00000489049 NACADO15069 1562 aa11.65□□□□□ -0.54
PDCD4-209ENST00000489049 RIMBP2O15034 1052 aa11.62□□□□□ -0.55
PDCD4-209ENST00000489049 SPNS2Q8IVW8 549 aa11.61□□□□□ -0.55
PDCD4-209ENST00000489049 KRTAP3-3Q9BYR6 98 aa11.59□□□□□ -0.55
PDCD4-209ENST00000489049 KRTAP3-2Q9BYR7 98 aa11.59□□□□□ -0.55
PDCD4-209ENST00000489049 ZSWIM6Q9HCJ5 1215 aa11.57□□□□□ -0.56
PDCD4-209ENST00000489049 MMRN1Q13201 1228 aa11.56□□□□□ -0.56
PDCD4-209ENST00000489049 ERBB3P21860 1342 aa11.55□□□□□ -0.56
PDCD4-209ENST00000489049 GPR153Q6NV75 609 aa11.53□□□□□ -0.56
PDCD4-209ENST00000489049 ABCC9O60706 1549 aa11.51□□□□□ -0.57
PDCD4-209ENST00000489049 KIF3CO14782 793 aa11.5□□□□□ -0.57
PDCD4-209ENST00000489049 VARS2Q5ST30 1063 aaKnown RBP11.49□□□□□ -0.57
PDCD4-209ENST00000489049 C2orf72A6NCS6 295 aa11.48□□□□□ -0.57
PDCD4-209ENST00000489049 RB1CC1Q8TDY2 1594 aa11.47□□□□□ -0.57
PDCD4-209ENST00000489049 ARSIQ5FYB1 569 aa11.46□□□□□ -0.57
PDCD4-209ENST00000489049 PPP1R37O75864 691 aa11.45□□□□□ -0.58
PDCD4-209ENST00000489049 HS6ST3Q8IZP7 471 aa11.45□□□□□ -0.58
PDCD4-209ENST00000489049 KHSRPQ92945 711 aaKnown RBP eCLIP11.42□□□□□ -0.58
PDCD4-209ENST00000489049 ZNF687Q8N1G0 1237 aa11.41□□□□□ -0.58
PDCD4-209ENST00000489049 TMC2Q8TDI7 906 aa11.41□□□□□ -0.58
PDCD4-209ENST00000489049 SUPT5HO00267 1087 aaKnown RBP11.39□□□□□ -0.59
PDCD4-209ENST00000489049 ZNF316A6NFI3 1004 aaPredicted RBP11.38□□□□□ -0.59
PDCD4-209ENST00000489049 CHGAP10645 457 aaKnown RBP11.37□□□□□ -0.59
PDCD4-209ENST00000489049 SCRIBQ14160 1630 aa11.36□□□□□ -0.59
PDCD4-209ENST00000489049 SLC34A2O95436 690 aa11.36□□□□□ -0.59
PDCD4-209ENST00000489049 NUDT7P0C024 238 aa11.34□□□□□ -0.59
PDCD4-209ENST00000489049 PCDHGA4Q9Y5G9 962 aa11.33□□□□□ -0.6
PDCD4-209ENST00000489049 NKX1-1Q15270 411 aaPredicted RBP11.29□□□□□ -0.6
PDCD4-209ENST00000489049 LHX6Q9UPM6 363 aa11.28□□□□□ -0.6
PDCD4-209ENST00000489049 FOXK1P85037 733 aa11.27□□□□□ -0.61
PDCD4-209ENST00000489049 RNF166Q96A37 237 aaPredicted RBP11.26□□□□□ -0.61
PDCD4-209ENST00000489049 GPHNQ9NQX3 736 aaPredicted RBP11.26□□□□□ -0.61
PDCD4-209ENST00000489049 MYT1LQ9UL68 1186 aa11.25□□□□□ -0.61
PDCD4-209ENST00000489049 PLPP6Q8IY26 295 aa11.24□□□□□ -0.61
PDCD4-209ENST00000489049 PTCD2Q8WV60 388 aaKnown RBP11.24□□□□□ -0.61
PDCD4-209ENST00000489049 RYDENQ9NUL5 291 aaKnown RBP11.24□□□□□ -0.61
PDCD4-209ENST00000489049 PBX2P40425 430 aa11.22□□□□□ -0.61
PDCD4-209ENST00000489049 PTGER2P43116 358 aa11.22□□□□□ -0.61
PDCD4-209ENST00000489049 LSM11P83369 360 aaKnown RBP eCLIP11.22□□□□□ -0.61
PDCD4-209ENST00000489049 DSG2Q14126 1118 aa11.22□□□□□ -0.61
PDCD4-209ENST00000489049 ANKRD13DQ6ZTN6 518 aa11.22□□□□□ -0.61
PDCD4-209ENST00000489049 RSF1Q96T23 1441 aaPredicted RBP11.21□□□□□ -0.61
PDCD4-209ENST00000489049 KDM4FA0A1W2PPD8 638 aa11.2□□□□□ -0.62
PDCD4-209ENST00000489049 POTEEQ6S8J3 1075 aa11.2□□□□□ -0.62
PDCD4-209ENST00000489049 PSDA5PKW4 1024 aaPredicted RBP11.17□□□□□ -0.62
PDCD4-209ENST00000489049 AXIN2Q9Y2T1 843 aa11.17□□□□□ -0.62
PDCD4-209ENST00000489049 CRISPLD2Q9H0B8 497 aa11.15□□□□□ -0.62
PDCD4-209ENST00000489049 TBC1D12O60347 775 aa11.14□□□□□ -0.63
PDCD4-209ENST00000489049 BAZ1AQ9NRL2 1556 aaPredicted RBP11.13□□□□□ -0.63
PDCD4-209ENST00000489049 GTPBP6O43824 516 aaPredicted RBP11.12□□□□□ -0.63
PDCD4-209ENST00000489049 ARHGAP33O14559 1287 aa11.11□□□□□ -0.63
PDCD4-209ENST00000489049 PPP1R15BQ5SWA1 713 aa11.1□□□□□ -0.63
PDCD4-209ENST00000489049 OXER1Q8TDS5 423 aa11.1□□□□□ -0.63
PDCD4-209ENST00000489049 RTN4Q9NQC3 1192 aaKnown RBP11.1□□□□□ -0.63
PDCD4-209ENST00000489049 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
PDCD4-209ENST00000489049 PPP4R3BQ5MIZ7 849 aa11.08□□□□□ -0.64
PDCD4-209ENST00000489049 UPF1Q92900 1129 aaKnown RBP eCLIP11.08□□□□□ -0.64
PDCD4-209ENST00000489049 AMER1Q5JTC6 1135 aaPredicted RBP11.07□□□□□ -0.64
PDCD4-209ENST00000489049 PDE4AP27815 886 aa11.06□□□□□ -0.64
PDCD4-209ENST00000489049 UNC13AQ9UPW8 1703 aa11.06□□□□□ -0.64
PDCD4-209ENST00000489049 CECR2Q9BXF3 1484 aa11.06□□□□□ -0.64
PDCD4-209ENST00000489049 ADGRD1Q6QNK2 874 aa11.05□□□□□ -0.64
PDCD4-209ENST00000489049 MROH2BQ7Z745 1585 aa11.04□□□□□ -0.64
PDCD4-209ENST00000489049 PSEN2P49810 448 aa11.04□□□□□ -0.64
PDCD4-209ENST00000489049 DMRTA1Q5VZB9 504 aa11.04□□□□□ -0.64
PDCD4-209ENST00000489049 TK2O00142 265 aa11.02□□□□□ -0.65
PDCD4-209ENST00000489049 BICRAQ9NZM4 1560 aa11.01□□□□□ -0.65
PDCD4-209ENST00000489049 LARP6Q9BRS8 491 aaKnown RBP11□□□□□ -0.65
PDCD4-209ENST00000489049 HRO43593 1189 aa10.99□□□□□ -0.65
PDCD4-209ENST00000489049 DDX27Q96GQ7 796 aaKnown RBP10.99□□□□□ -0.65
PDCD4-209ENST00000489049 SMARCA4P51532 1647 aa10.98□□□□□ -0.65
PDCD4-209ENST00000489049 MFSD10Q14728 455 aa10.98□□□□□ -0.65
PDCD4-209ENST00000489049 ZNF454Q8N9F8 522 aa10.98□□□□□ -0.65
PDCD4-209ENST00000489049 KCNK17Q96T54 332 aa10.98□□□□□ -0.65
PDCD4-209ENST00000489049 KCNH8Q96L42 1107 aa10.97□□□□□ -0.65
PDCD4-209ENST00000489049 FOSBP53539 338 aa10.95□□□□□ -0.66
PDCD4-209ENST00000489049 ANO8Q9HCE9 1232 aaPredicted RBP10.95□□□□□ -0.66
PDCD4-209ENST00000489049 EVI5O60447 810 aa10.94□□□□□ -0.66
PDCD4-209ENST00000489049 BCL2L12Q9HB09 334 aa10.94□□□□□ -0.66
PDCD4-209ENST00000489049 PEG3Q9GZU2 1588 aa10.93□□□□□ -0.66
PDCD4-209ENST00000489049 TOP2AP11388 1531 aaKnown RBP10.93□□□□□ -0.66
PDCD4-209ENST00000489049 CADPS2Q86UW7 1296 aa10.92□□□□□ -0.66
PDCD4-209ENST00000489049 HCSTQ9UBK5 93 aa10.92□□□□□ -0.66
PDCD4-209ENST00000489049 WIZO95785 1651 aa10.92□□□□□ -0.66
PDCD4-209ENST00000489049 JPH4Q96JJ6 628 aa10.91□□□□□ -0.66
PDCD4-209ENST00000489049 MAP3K9P80192 1104 aa10.9□□□□□ -0.66
PDCD4-209ENST00000489049 EMILIN3Q9NT22 766 aa10.9□□□□□ -0.66
PDCD4-209ENST00000489049 VPS9D1Q9Y2B5 631 aa10.9□□□□□ -0.66
PDCD4-209ENST00000489049 PTPREP23469 700 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms