RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 ATP1B4Q9UN42 357 aaPredicted RBP17.96■□□□□ 0.47
YIPF3-207ENST00000488966 SIGLEC1Q9BZZ2 1709 aa17.95■□□□□ 0.46
YIPF3-207ENST00000488966 HECW1Q76N89 1606 aa17.95■□□□□ 0.46
YIPF3-207ENST00000488966 UBTFP17480 764 aaKnown RBP17.94■□□□□ 0.46
YIPF3-207ENST00000488966 EFCAB2Q5VUJ9 269 aa17.92■□□□□ 0.46
YIPF3-207ENST00000488966 FMN1Q68DA7 1419 aa17.91■□□□□ 0.46
YIPF3-207ENST00000488966 ARHGAP35Q9NRY4 1499 aa17.9■□□□□ 0.46
YIPF3-207ENST00000488966 ATP10AO60312 1499 aa17.89■□□□□ 0.45
YIPF3-207ENST00000488966 CDK11AQ9UQ88 783 aaPredicted RBP17.89■□□□□ 0.45
YIPF3-207ENST00000488966 C9orf84Q5VXU9 1444 aa17.88■□□□□ 0.45
YIPF3-207ENST00000488966 AFAP1Q8N556 730 aa17.86■□□□□ 0.45
YIPF3-207ENST00000488966 ARHGEF12Q9NZN5 1544 aa17.86■□□□□ 0.45
YIPF3-207ENST00000488966 CEBPAP49715 358 aaPredicted RBP17.85■□□□□ 0.45
YIPF3-207ENST00000488966 TROQ12816 1431 aaPredicted RBP17.85■□□□□ 0.45
YIPF3-207ENST00000488966 KIF14Q15058 1648 aa17.85■□□□□ 0.45
YIPF3-207ENST00000488966 CERKQ8TCT0 537 aa17.83■□□□□ 0.44
YIPF3-207ENST00000488966 FER1L4A9Z1Z3 1794 aa17.83■□□□□ 0.44
YIPF3-207ENST00000488966 ARHGAP5Q13017 1502 aa17.82■□□□□ 0.44
YIPF3-207ENST00000488966 ZNF518AQ6AHZ1 1483 aa17.82■□□□□ 0.44
YIPF3-207ENST00000488966 MYO5CQ9NQX4 1742 aa17.81■□□□□ 0.44
YIPF3-207ENST00000488966 CLIP1P30622 1438 aa17.8■□□□□ 0.44
YIPF3-207ENST00000488966 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
YIPF3-207ENST00000488966 MYT1LQ9UL68 1186 aa17.79■□□□□ 0.44
YIPF3-207ENST00000488966 KDM5CP41229 1560 aa17.79■□□□□ 0.44
YIPF3-207ENST00000488966 DIP2CQ9Y2E4 1556 aa17.74■□□□□ 0.43
YIPF3-207ENST00000488966 TRAPPC8Q9Y2L5 1435 aa17.74■□□□□ 0.43
YIPF3-207ENST00000488966 MLH3Q9UHC1 1453 aa17.74■□□□□ 0.43
YIPF3-207ENST00000488966 UHRF1BP1Q6BDS2 1440 aa17.72■□□□□ 0.43
YIPF3-207ENST00000488966 LRRIQ1Q96JM4 1722 aa17.72■□□□□ 0.43
YIPF3-207ENST00000488966 PREX1Q8TCU6 1659 aa17.72■□□□□ 0.43
YIPF3-207ENST00000488966 CASKIN1Q8WXD9 1431 aa17.72■□□□□ 0.43
YIPF3-207ENST00000488966 REREQ9P2R6 1566 aa17.71■□□□□ 0.43
YIPF3-207ENST00000488966 DMRT2Q9Y5R5 561 aa17.7■□□□□ 0.42
YIPF3-207ENST00000488966 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
YIPF3-207ENST00000488966 ABCC1P33527 1531 aa17.69■□□□□ 0.42
YIPF3-207ENST00000488966 CDC42BPBQ9Y5S2 1711 aa17.69■□□□□ 0.42
YIPF3-207ENST00000488966 CCDC18Q5T9S5 1454 aa17.68■□□□□ 0.42
YIPF3-207ENST00000488966 AGLP35573 1532 aa17.67■□□□□ 0.42
YIPF3-207ENST00000488966 ESF1Q9H501 851 aaKnown RBP17.67■□□□□ 0.42
YIPF3-207ENST00000488966 PREX2Q70Z35 1606 aa17.67■□□□□ 0.42
YIPF3-207ENST00000488966 STRCQ7RTU9 1775 aa17.66■□□□□ 0.42
YIPF3-207ENST00000488966 ZNF777Q9ULD5 760 aaPredicted RBP17.64■□□□□ 0.41
YIPF3-207ENST00000488966 C3P01024 1663 aa17.63■□□□□ 0.41
YIPF3-207ENST00000488966 PTPRTO14522 1441 aa17.63■□□□□ 0.41
YIPF3-207ENST00000488966 ITSN2Q9NZM3 1697 aa17.62■□□□□ 0.41
YIPF3-207ENST00000488966 KIDINS220Q9ULH0 1771 aa17.61■□□□□ 0.41
YIPF3-207ENST00000488966 CNTLNQ9NXG0 1405 aa17.61■□□□□ 0.41
YIPF3-207ENST00000488966 SETD1BQ9UPS6 1966 aaKnown RBP17.6■□□□□ 0.41
YIPF3-207ENST00000488966 HNRNPMP52272 730 aaKnown RBP eCLIP17.6■□□□□ 0.41
YIPF3-207ENST00000488966 FYCO1Q9BQS8 1478 aa17.6■□□□□ 0.41
YIPF3-207ENST00000488966 GPATCH8Q9UKJ3 1502 aaKnown RBP17.6■□□□□ 0.41
YIPF3-207ENST00000488966 SAMD9LQ8IVG5 1584 aa17.59■□□□□ 0.41
YIPF3-207ENST00000488966 SPAG9O60271 1321 aaKnown RBP17.59■□□□□ 0.41
YIPF3-207ENST00000488966 CDC42BPAQ5VT25 1732 aa17.58■□□□□ 0.41
YIPF3-207ENST00000488966 NCOA1Q15788 1441 aa17.57■□□□□ 0.4
YIPF3-207ENST00000488966 SYCP2Q9BX26 1530 aa17.57■□□□□ 0.4
YIPF3-207ENST00000488966 ZMYM3Q14202 1370 aa17.56■□□□□ 0.4
YIPF3-207ENST00000488966 CFDP1Q9UEE9 299 aaPredicted RBP17.55■□□□□ 0.4
YIPF3-207ENST00000488966 NPATQ14207 1427 aa17.55■□□□□ 0.4
YIPF3-207ENST00000488966 LTBP4Q8N2S1 1624 aa17.54■□□□□ 0.4
YIPF3-207ENST00000488966 DISP3Q9P2K9 1392 aa17.54■□□□□ 0.4
YIPF3-207ENST00000488966 KIAA1107Q9UPP5 1409 aa17.54■□□□□ 0.4
YIPF3-207ENST00000488966 ILDR2Q71H61 639 aa17.53■□□□□ 0.4
YIPF3-207ENST00000488966 ATP7AQ04656 1500 aa17.51■□□□□ 0.39
YIPF3-207ENST00000488966 CCNB3Q8WWL7 1395 aa17.51■□□□□ 0.39
YIPF3-207ENST00000488966 CAMSAP1Q5T5Y3 1602 aa17.5■□□□□ 0.39
YIPF3-207ENST00000488966 A2MP01023 1474 aa17.5■□□□□ 0.39
YIPF3-207ENST00000488966 NCKAP5LQ9HCH0 1330 aa17.5■□□□□ 0.39
YIPF3-207ENST00000488966 PLEKHH2Q8IVE3 1493 aa17.5■□□□□ 0.39
YIPF3-207ENST00000488966 GGT6Q6P531 493 aa17.49■□□□□ 0.39
YIPF3-207ENST00000488966 PLXNC1O60486 1568 aa17.48■□□□□ 0.39
YIPF3-207ENST00000488966 MROH2AA6NES4 1674 aa17.48■□□□□ 0.39
YIPF3-207ENST00000488966 ZNF644Q9H582 1327 aaPredicted RBP17.47■□□□□ 0.39
YIPF3-207ENST00000488966 SUPT6HQ7KZ85 1726 aaKnown RBP17.47■□□□□ 0.39
YIPF3-207ENST00000488966 MTUS2Q5JR59 1369 aa17.47■□□□□ 0.39
YIPF3-207ENST00000488966 INO80Q9ULG1 1556 aaPredicted RBP17.47■□□□□ 0.39
YIPF3-207ENST00000488966 PTPRKQ15262 1439 aa17.47■□□□□ 0.39
YIPF3-207ENST00000488966 ZNF335Q9H4Z2 1342 aaPredicted RBP17.46■□□□□ 0.38
YIPF3-207ENST00000488966 IQSEC2Q5JU85 1478 aa17.45■□□□□ 0.38
YIPF3-207ENST00000488966 CLTCQ00610 1675 aaKnown RBP17.43■□□□□ 0.38
YIPF3-207ENST00000488966 PKD2Q13563 968 aa17.43■□□□□ 0.38
YIPF3-207ENST00000488966 PPP6R1Q9UPN7 881 aa17.43■□□□□ 0.38
YIPF3-207ENST00000488966 SOCS7O14512 581 aa17.42■□□□□ 0.38
YIPF3-207ENST00000488966 PLA2R1Q13018 1463 aa17.42■□□□□ 0.38
YIPF3-207ENST00000488966 MBD5Q9P267 1494 aa17.42■□□□□ 0.38
YIPF3-207ENST00000488966 CEP170BQ9Y4F5 1589 aaPredicted RBP17.4■□□□□ 0.38
YIPF3-207ENST00000488966 MYO3AQ8NEV4 1616 aa17.4■□□□□ 0.38
YIPF3-207ENST00000488966 TCOF1Q13428 1488 aaKnown RBP17.4■□□□□ 0.38
YIPF3-207ENST00000488966 TIAM1Q13009 1591 aa17.39■□□□□ 0.37
YIPF3-207ENST00000488966 SPATA31D1Q6ZQQ2 1576 aa17.39■□□□□ 0.37
YIPF3-207ENST00000488966 UBAP1LF5GYI3 381 aa17.38■□□□□ 0.37
YIPF3-207ENST00000488966 DHX29Q7Z478 1369 aaKnown RBP17.38■□□□□ 0.37
YIPF3-207ENST00000488966 ZNF142P52746 1687 aaPredicted RBP17.37■□□□□ 0.37
YIPF3-207ENST00000488966 RTEL1-TNFRSF6BF6WH68 1400 aa17.37■□□□□ 0.37
YIPF3-207ENST00000488966 CEP162Q5TB80 1403 aa17.37■□□□□ 0.37
YIPF3-207ENST00000488966 EHBP1L1Q8N3D4 1523 aa17.36■□□□□ 0.37
YIPF3-207ENST00000488966 KIF3BO15066 747 aa17.35■□□□□ 0.37
YIPF3-207ENST00000488966 FBXO31Q5XUX0 539 aaPredicted RBP17.35■□□□□ 0.37
YIPF3-207ENST00000488966 A2ML1A8K2U0 1454 aa17.35■□□□□ 0.37
YIPF3-207ENST00000488966 ADGBQ8N7X0 1667 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms