RNA–Protein interactions for RNA: ENST00000488625.6

ZEB1-206, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,026 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-206ENST00000488625 LAS1LQ9Y4W2 734 aaKnown RBP12.92□□□□□ -0.34
ZEB1-206ENST00000488625 KANK1Q14678 1352 aa12.92□□□□□ -0.34
ZEB1-206ENST00000488625 NCOA2Q15596 1464 aa12.92□□□□□ -0.34
ZEB1-206ENST00000488625 ROCK2O75116 1388 aaKnown RBP12.92□□□□□ -0.34
ZEB1-206ENST00000488625 ANKRD30AQ9BXX3 1397 aa12.92□□□□□ -0.34
ZEB1-206ENST00000488625 PCF11O94913 1555 aaKnown RBP12.91□□□□□ -0.34
ZEB1-206ENST00000488625 GAPVD1Q14C86 1478 aa12.91□□□□□ -0.34
ZEB1-206ENST00000488625 KTN1Q86UP2 1357 aaKnown RBP12.91□□□□□ -0.34
ZEB1-206ENST00000488625 CC2D2AQ9P2K1 1620 aa12.91□□□□□ -0.34
ZEB1-206ENST00000488625 CDCA8Q53HL2 280 aa12.9□□□□□ -0.34
ZEB1-206ENST00000488625 NUDCQ9Y266 331 aa12.9□□□□□ -0.34
ZEB1-206ENST00000488625 PRDM2Q13029 1718 aa12.9□□□□□ -0.34
ZEB1-206ENST00000488625 TMF1P82094 1093 aa12.89□□□□□ -0.35
ZEB1-206ENST00000488625 NUP155O75694 1391 aa12.89□□□□□ -0.35
ZEB1-206ENST00000488625 DEKP35659 375 aaKnown RBP12.89□□□□□ -0.35
ZEB1-206ENST00000488625 MRC2Q9UBG0 1479 aa12.88□□□□□ -0.35
ZEB1-206ENST00000488625 RALBP1Q15311 655 aa12.88□□□□□ -0.35
ZEB1-206ENST00000488625 PPM1GO15355 546 aaPredicted RBP12.87□□□□□ -0.35
ZEB1-206ENST00000488625 EHBP1L1Q8N3D4 1523 aa12.87□□□□□ -0.35
ZEB1-206ENST00000488625 CNTLNQ9NXG0 1405 aa12.87□□□□□ -0.35
ZEB1-206ENST00000488625 PRKRIP1Q9H875 184 aaPredicted RBP12.86□□□□□ -0.35
ZEB1-206ENST00000488625 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
ZEB1-206ENST00000488625 EIF5BO60841 1220 aaKnown RBP12.86□□□□□ -0.35
ZEB1-206ENST00000488625 HSP90AA1P07900 732 aaKnown RBP12.85□□□□□ -0.35
ZEB1-206ENST00000488625 ZBED9Q6R2W3 1325 aa12.85□□□□□ -0.35
ZEB1-206ENST00000488625 BECN1Q14457 450 aa12.85□□□□□ -0.35
ZEB1-206ENST00000488625 RCAN3Q9UKA8 241 aa12.85□□□□□ -0.35
ZEB1-206ENST00000488625 C14orf37Q86TY3 774 aa12.84□□□□□ -0.35
ZEB1-206ENST00000488625 ARXQ96QS3 562 aa12.84□□□□□ -0.35
ZEB1-206ENST00000488625 KIF15Q9NS87 1388 aa12.84□□□□□ -0.35
ZEB1-206ENST00000488625 EFCAB2Q5VUJ9 269 aa12.83□□□□□ -0.36
ZEB1-206ENST00000488625 SLC24A1O60721 1099 aa12.83□□□□□ -0.36
ZEB1-206ENST00000488625 CCDC7Q96M83 1385 aa12.82□□□□□ -0.36
ZEB1-206ENST00000488625 RGS3P49796 1198 aa12.82□□□□□ -0.36
ZEB1-206ENST00000488625 USP47Q96K76 1375 aa12.82□□□□□ -0.36
ZEB1-206ENST00000488625 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
ZEB1-206ENST00000488625 IFT140Q96RY7 1462 aa12.81□□□□□ -0.36
ZEB1-206ENST00000488625 WASHC2AQ641Q2 1341 aa12.81□□□□□ -0.36
ZEB1-206ENST00000488625 MAP3K1Q13233 1512 aa12.81□□□□□ -0.36
ZEB1-206ENST00000488625 HECW1Q76N89 1606 aa12.8□□□□□ -0.36
ZEB1-206ENST00000488625 HNRNPMP52272 730 aaKnown RBP eCLIP12.8□□□□□ -0.364e-6■■■■□ 20.1
ZEB1-206ENST00000488625 SENP3Q9H4L4 574 aaPredicted RBP12.8□□□□□ -0.36
ZEB1-206ENST00000488625 CUL7Q14999 1698 aa12.8□□□□□ -0.36
ZEB1-206ENST00000488625 TOPBP1Q92547 1522 aa12.8□□□□□ -0.36
ZEB1-206ENST00000488625 MYBBP1AQ9BQG0 1328 aaKnown RBP12.79□□□□□ -0.36
ZEB1-206ENST00000488625 CFAP53Q96M91 514 aa12.79□□□□□ -0.36
ZEB1-206ENST00000488625 HFM1A2PYH4 1435 aa12.79□□□□□ -0.36
ZEB1-206ENST00000488625 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
ZEB1-206ENST00000488625 JPH4Q96JJ6 628 aa12.79□□□□□ -0.36
ZEB1-206ENST00000488625 FANCIQ9NVI1 1328 aa12.78□□□□□ -0.36
ZEB1-206ENST00000488625 IPO9Q96P70 1041 aaKnown RBP12.78□□□□□ -0.36
ZEB1-206ENST00000488625 TCERG1O14776 1098 aaKnown RBP12.78□□□□□ -0.36
ZEB1-206ENST00000488625 RSPH4AQ5TD94 716 aa12.78□□□□□ -0.36
ZEB1-206ENST00000488625 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
ZEB1-206ENST00000488625 ANP32BQ92688 251 aaKnown RBP12.77□□□□□ -0.36
ZEB1-206ENST00000488625 KIF7Q2M1P5 1343 aa12.77□□□□□ -0.36
ZEB1-206ENST00000488625 NESP48681 1621 aa12.77□□□□□ -0.37
ZEB1-206ENST00000488625 FRAT1Q92837 279 aaPredicted RBP12.76□□□□□ -0.37
ZEB1-206ENST00000488625 TNNT2P45379 298 aaPredicted RBP12.76□□□□□ -0.37
ZEB1-206ENST00000488625 RTN4Q9NQC3 1192 aaKnown RBP12.76□□□□□ -0.37
ZEB1-206ENST00000488625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.75□□□□□ -0.37
ZEB1-206ENST00000488625 PTPN23Q9H3S7 1636 aa12.75□□□□□ -0.37
ZEB1-206ENST00000488625 PTPRGP23470 1445 aa12.75□□□□□ -0.37
ZEB1-206ENST00000488625 MAPKBP1O60336 1514 aa12.75□□□□□ -0.37
ZEB1-206ENST00000488625 FTSJ3Q8IY81 847 aaKnown RBP12.75□□□□□ -0.37
ZEB1-206ENST00000488625 GRIN2BQ13224 1484 aa12.74□□□□□ -0.37
ZEB1-206ENST00000488625 ST20-MTHFSA0A0A6YYL1 179 aa12.74□□□□□ -0.37
ZEB1-206ENST00000488625 ZNF644Q9H582 1327 aaPredicted RBP12.74□□□□□ -0.37
ZEB1-206ENST00000488625 AQRO60306 1485 aaKnown RBP eCLIP12.73□□□□□ -0.37
ZEB1-206ENST00000488625 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
ZEB1-206ENST00000488625 NLRP13Q86W25 1043 aa12.73□□□□□ -0.37
ZEB1-206ENST00000488625 MYH16Q9H6N6 1097 aa12.72□□□□□ -0.37
ZEB1-206ENST00000488625 ABCA10Q8WWZ4 1543 aa12.72□□□□□ -0.37
ZEB1-206ENST00000488625 CCDC144AA2RUR9 1427 aa12.72□□□□□ -0.37
ZEB1-206ENST00000488625 HAP1P54257 671 aaPredicted RBP12.72□□□□□ -0.37
ZEB1-206ENST00000488625 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
ZEB1-206ENST00000488625 PDE3BQ13370 1112 aa12.71□□□□□ -0.37
ZEB1-206ENST00000488625 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
ZEB1-206ENST00000488625 EXOC6Q8TAG9 804 aa12.69□□□□□ -0.38
ZEB1-206ENST00000488625 EIF3AQ14152 1382 aaKnown RBP12.69□□□□□ -0.38
ZEB1-206ENST00000488625 NAIPQ13075 1403 aa12.69□□□□□ -0.38
ZEB1-206ENST00000488625 MAPK8IP3Q9UPT6 1336 aa12.69□□□□□ -0.38
ZEB1-206ENST00000488625 CYB5RLQ6IPT4 315 aa12.68□□□□□ -0.38
ZEB1-206ENST00000488625 CTTNBP2Q8WZ74 1663 aa12.68□□□□□ -0.38
ZEB1-206ENST00000488625 MIA2Q96PC5 1412 aa12.68□□□□□ -0.38
ZEB1-206ENST00000488625 MORC1Q86VD1 984 aa12.68□□□□□ -0.38
ZEB1-206ENST00000488625 PANK3Q9H999 370 aa12.67□□□□□ -0.38
ZEB1-206ENST00000488625 DAPK1P53355 1430 aa12.67□□□□□ -0.38
ZEB1-206ENST00000488625 CDK13Q14004 1512 aaKnown RBP12.67□□□□□ -0.38
ZEB1-206ENST00000488625 CCDC146Q8IYE0 955 aa12.67□□□□□ -0.38
ZEB1-206ENST00000488625 AEBP2Q6ZN18 517 aaPredicted RBP12.66□□□□□ -0.38
ZEB1-206ENST00000488625 PLIN1O60240 522 aa12.65□□□□□ -0.38
ZEB1-206ENST00000488625 GOLGA2Q08379 1002 aa12.65□□□□□ -0.38
ZEB1-206ENST00000488625 U2SURPO15042 1029 aaKnown RBP12.64□□□□□ -0.39
ZEB1-206ENST00000488625 NBPF8Q3BBV2 869 aa12.64□□□□□ -0.39
ZEB1-206ENST00000488625 EPRSP07814 1512 aaKnown RBP12.64□□□□□ -0.39
ZEB1-206ENST00000488625 PDE4AP27815 886 aa12.64□□□□□ -0.39
ZEB1-206ENST00000488625 MLECQ14165 292 aa12.64□□□□□ -0.39
ZEB1-206ENST00000488625 CRBNQ96SW2 442 aa12.63□□□□□ -0.39
ZEB1-206ENST00000488625 ANKRD50Q9ULJ7 1429 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms