RNA–Protein interactions for RNA: ENST00000488185.2

PKD1-221, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-221ENST00000488185 LOC105371045A0A1W2PR82 267 aa32.83■■■□□ 2.85
PKD1-221ENST00000488185 POGZQ7Z3K3 1410 aa32.81■■■□□ 2.84
PKD1-221ENST00000488185 ARHGAP5Q13017 1502 aa32.77■■■□□ 2.84
PKD1-221ENST00000488185 ARHGEF40Q8TER5 1519 aa32.77■■■□□ 2.84
PKD1-221ENST00000488185 PREX2Q70Z35 1606 aa32.73■■■□□ 2.83
PKD1-221ENST00000488185 CDC42BPBQ9Y5S2 1711 aa32.72■■■□□ 2.83
PKD1-221ENST00000488185 ZNF518AQ6AHZ1 1483 aa32.7■■■□□ 2.83
PKD1-221ENST00000488185 ZFYVE16Q7Z3T8 1539 aa32.69■■■□□ 2.82
PKD1-221ENST00000488185 MTUS2Q5JR59 1369 aa32.68■■■□□ 2.82
PKD1-221ENST00000488185 GPATCH8Q9UKJ3 1502 aaKnown RBP32.67■■■□□ 2.82
PKD1-221ENST00000488185 YEATS2Q9ULM3 1422 aa32.66■■■□□ 2.82
PKD1-221ENST00000488185 KDM5CP41229 1560 aa32.65■■■□□ 2.82
PKD1-221ENST00000488185 CDC42BPAQ5VT25 1732 aa32.64■■■□□ 2.82
PKD1-221ENST00000488185 VPS8Q8N3P4 1428 aa32.64■■■□□ 2.82
PKD1-221ENST00000488185 ADAMTSL3P82987 1691 aa32.62■■■□□ 2.81
PKD1-221ENST00000488185 ABCC1P33527 1531 aa32.61■■■□□ 2.81
PKD1-221ENST00000488185 AFAP1Q8N556 730 aa32.61■■■□□ 2.81
PKD1-221ENST00000488185 EHBP1L1Q8N3D4 1523 aa32.6■■■□□ 2.81
PKD1-221ENST00000488185 ARHGEF12Q9NZN5 1544 aa32.59■■■□□ 2.81
PKD1-221ENST00000488185 BCORL1Q5H9F3 1711 aa32.58■■■□□ 2.81
PKD1-221ENST00000488185 ATP10AO60312 1499 aa32.58■■■□□ 2.81
PKD1-221ENST00000488185 MLH3Q9UHC1 1453 aa32.58■■■□□ 2.81
PKD1-221ENST00000488185 CCNB3Q8WWL7 1395 aa32.58■■■□□ 2.81
PKD1-221ENST00000488185 ARID4BQ4LE39 1312 aaPredicted RBP32.57■■■□□ 2.8
PKD1-221ENST00000488185 KIAA1107Q9UPP5 1409 aa32.54■■■□□ 2.8
PKD1-221ENST00000488185 TRAPPC8Q9Y2L5 1435 aa32.54■■■□□ 2.8
PKD1-221ENST00000488185 CFDP1Q9UEE9 299 aaPredicted RBP32.53■■■□□ 2.8
PKD1-221ENST00000488185 C9orf84Q5VXU9 1444 aa32.52■■■□□ 2.8
PKD1-221ENST00000488185 PLEKHH2Q8IVE3 1493 aa32.51■■■□□ 2.79
PKD1-221ENST00000488185 ITSN2Q9NZM3 1697 aa32.5■■■□□ 2.79
PKD1-221ENST00000488185 SAMD9LQ8IVG5 1584 aa32.5■■■□□ 2.79
PKD1-221ENST00000488185 MAP3K1Q13233 1512 aa32.5■■■□□ 2.79
PKD1-221ENST00000488185 TIAM1Q13009 1591 aa32.49■■■□□ 2.79
PKD1-221ENST00000488185 HECW2Q9P2P5 1572 aa32.49■■■□□ 2.79
PKD1-221ENST00000488185 PTPRMP28827 1452 aa32.49■■■□□ 2.79
PKD1-221ENST00000488185 SIGLEC1Q9BZZ2 1709 aa32.46■■■□□ 2.79
PKD1-221ENST00000488185 REREQ9P2R6 1566 aa32.46■■■□□ 2.79
PKD1-221ENST00000488185 ZNF777Q9ULD5 760 aaPredicted RBP32.45■■■□□ 2.79
PKD1-221ENST00000488185 MADDQ8WXG6 1647 aa32.43■■■□□ 2.78
PKD1-221ENST00000488185 DIP2CQ9Y2E4 1556 aa32.42■■■□□ 2.78
PKD1-221ENST00000488185 NCOA2Q15596 1464 aa32.41■■■□□ 2.78
PKD1-221ENST00000488185 LRRC9Q6ZRR7 1453 aa32.41■■■□□ 2.78
PKD1-221ENST00000488185 SYCP2Q9BX26 1530 aa32.41■■■□□ 2.78
PKD1-221ENST00000488185 HNRNPMP52272 730 aaKnown RBP eCLIP32.39■■■□□ 2.78
PKD1-221ENST00000488185 SUPT6HQ7KZ85 1726 aaKnown RBP32.38■■■□□ 2.77
PKD1-221ENST00000488185 KIDINS220Q9ULH0 1771 aa32.36■■■□□ 2.77
PKD1-221ENST00000488185 ABCA6Q8N139 1617 aa32.36■■■□□ 2.77
PKD1-221ENST00000488185 AGLP35573 1532 aa32.36■■■□□ 2.77
PKD1-221ENST00000488185 MYT1LQ9UL68 1186 aa32.35■■■□□ 2.77
PKD1-221ENST00000488185 SPAG9O60271 1321 aaKnown RBP32.34■■■□□ 2.77
PKD1-221ENST00000488185 MBD5Q9P267 1494 aa32.34■■■□□ 2.77
PKD1-221ENST00000488185 ZNF644Q9H582 1327 aaPredicted RBP32.31■■■□□ 2.76
PKD1-221ENST00000488185 KANK4Q5T7N3 995 aaPredicted RBP32.28■■■□□ 2.76
PKD1-221ENST00000488185 RIMS1Q86UR5 1692 aaKnown RBP32.27■■■□□ 2.76
PKD1-221ENST00000488185 MLECQ14165 292 aa32.27■■■□□ 2.76
PKD1-221ENST00000488185 RSPH4AQ5TD94 716 aa32.27■■■□□ 2.76
PKD1-221ENST00000488185 ATP7AQ04656 1500 aa32.26■■■□□ 2.75
PKD1-221ENST00000488185 INO80Q9ULG1 1556 aaPredicted RBP32.25■■■□□ 2.75
PKD1-221ENST00000488185 RTEL1-TNFRSF6BF6WH68 1400 aa32.24■■■□□ 2.75
PKD1-221ENST00000488185 FER1L4A9Z1Z3 1794 aa32.21■■■□□ 2.75
PKD1-221ENST00000488185 CAMSAP2Q08AD1 1489 aa32.19■■■□□ 2.74
PKD1-221ENST00000488185 MIA2Q96PC5 1412 aa32.17■■■□□ 2.74
PKD1-221ENST00000488185 APLP2Q06481 763 aa32.17■■■□□ 2.74
PKD1-221ENST00000488185 CCDC141Q6ZP82 1450 aa32.16■■■□□ 2.74
PKD1-221ENST00000488185 PLXNC1O60486 1568 aa32.15■■■□□ 2.74
PKD1-221ENST00000488185 A2MP01023 1474 aa32.15■■■□□ 2.74
PKD1-221ENST00000488185 MYOM3Q5VTT5 1437 aa32.14■■■□□ 2.74
PKD1-221ENST00000488185 ARHGEF5Q12774 1597 aa32.13■■■□□ 2.73
PKD1-221ENST00000488185 LMTK3Q96Q04 1460 aa32.11■■■□□ 2.73
PKD1-221ENST00000488185 CNTLNQ9NXG0 1405 aa32.09■■■□□ 2.73
PKD1-221ENST00000488185 ADGBQ8N7X0 1667 aa32.07■■■□□ 2.72
PKD1-221ENST00000488185 DHX29Q7Z478 1369 aaKnown RBP32.06■■■□□ 2.72
PKD1-221ENST00000488185 PPP6R1Q9UPN7 881 aa32.05■■■□□ 2.72
PKD1-221ENST00000488185 TSPY4P0CV99 314 aa32.04■■■□□ 2.72
PKD1-221ENST00000488185 TSPY10P0CW01 314 aa32.04■■■□□ 2.72
PKD1-221ENST00000488185 ESF1Q9H501 851 aaKnown RBP32.03■■■□□ 2.72
PKD1-221ENST00000488185 CEBPAP49715 358 aaPredicted RBP32.02■■■□□ 2.72
PKD1-221ENST00000488185 MAST1Q9Y2H9 1570 aa31.97■■■□□ 2.71
PKD1-221ENST00000488185 PLPPR3Q6T4P5 718 aa31.96■■■□□ 2.71
PKD1-221ENST00000488185 MROH2AA6NES4 1674 aa31.94■■■□□ 2.7
PKD1-221ENST00000488185 C3P01024 1663 aa31.93■■■□□ 2.7
PKD1-221ENST00000488185 SETD1BQ9UPS6 1966 aaKnown RBP31.93■■■□□ 2.7
PKD1-221ENST00000488185 ZMYM3Q14202 1370 aa31.92■■■□□ 2.7
PKD1-221ENST00000488185 PREX1Q8TCU6 1659 aa31.9■■■□□ 2.7
PKD1-221ENST00000488185 GGT6Q6P531 493 aa31.9■■■□□ 2.7
PKD1-221ENST00000488185 NPATQ14207 1427 aa31.9■■■□□ 2.7
PKD1-221ENST00000488185 FGD6Q6ZV73 1430 aa31.9■■■□□ 2.7
PKD1-221ENST00000488185 TCOF1Q13428 1488 aaKnown RBP31.9■■■□□ 2.7
PKD1-221ENST00000488185 FAM135AQ9P2D6 1515 aa31.87■■■□□ 2.69
PKD1-221ENST00000488185 PTPN23Q9H3S7 1636 aa31.86■■■□□ 2.69
PKD1-221ENST00000488185 UHRF1BP1Q6BDS2 1440 aa31.85■■■□□ 2.69
PKD1-221ENST00000488185 KIF3BO15066 747 aa31.85■■■□□ 2.69
PKD1-221ENST00000488185 HSPA2P54652 639 aa31.85■■■□□ 2.69
PKD1-221ENST00000488185 SHANK2Q9UPX8 1470 aa31.84■■■□□ 2.69
PKD1-221ENST00000488185 ABCC5O15440 1437 aa31.83■■■□□ 2.69
PKD1-221ENST00000488185 CLTCQ00610 1675 aaKnown RBP31.8■■■□□ 2.68
PKD1-221ENST00000488185 PTPRKQ15262 1439 aa31.77■■■□□ 2.68
PKD1-221ENST00000488185 DAPK1P53355 1430 aa31.76■■■□□ 2.68
PKD1-221ENST00000488185 DNMT1P26358 1616 aaKnown RBP31.75■■■□□ 2.67
PKD1-221ENST00000488185 EIF2AK4Q9P2K8 1649 aaKnown RBP31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms