RNA–Protein interactions for RNA: ENST00000487809.1

SUCLG1-206, Transcript of succinate-CoA ligase alpha subunit, humanhuman

TSL 2

Gene SUCLG1, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-206ENST00000487809 PHF8Q9UPP1 1060 aa12.33□□□□□ -0.44
SUCLG1-206ENST00000487809 MICALL2Q8IY33 904 aa12.32□□□□□ -0.44
SUCLG1-206ENST00000487809 EMP3P54852 163 aa12.29□□□□□ -0.44
SUCLG1-206ENST00000487809 PKD2Q13563 968 aa12.29□□□□□ -0.44
SUCLG1-206ENST00000487809 STK24Q9Y6E0 443 aa12.29□□□□□ -0.44
SUCLG1-206ENST00000487809 STK25O00506 426 aa12.27□□□□□ -0.45
SUCLG1-206ENST00000487809 HOXB3P14651 431 aaPredicted RBP12.26□□□□□ -0.45
SUCLG1-206ENST00000487809 DNAJC5Q9H3Z4 198 aa12.26□□□□□ -0.45
SUCLG1-206ENST00000487809 RGL2O15211 777 aa12.25□□□□□ -0.45
SUCLG1-206ENST00000487809 NLRP6P59044 892 aa12.25□□□□□ -0.45
SUCLG1-206ENST00000487809 TMEM92Q6UXU6 159 aa12.23□□□□□ -0.45
SUCLG1-206ENST00000487809 FBXO22Q8NEZ5 403 aa12.23□□□□□ -0.45
SUCLG1-206ENST00000487809 DOK7Q18PE1 504 aa12.22□□□□□ -0.45
SUCLG1-206ENST00000487809 ZNF710Q8N1W2 664 aa12.21□□□□□ -0.45
SUCLG1-206ENST00000487809 MFRPQ9BY79 579 aa12.21□□□□□ -0.45
SUCLG1-206ENST00000487809 HS3ST6Q96QI5 342 aa12.2□□□□□ -0.46
SUCLG1-206ENST00000487809 FAM205CA6NFA0 338 aa12.18□□□□□ -0.46
SUCLG1-206ENST00000487809 RIMBP2O15034 1052 aa12.16□□□□□ -0.46
SUCLG1-206ENST00000487809 HOXB1P14653 301 aaPredicted RBP12.16□□□□□ -0.46
SUCLG1-206ENST00000487809 POTEB3A0JP26 581 aa12.14□□□□□ -0.47
SUCLG1-206ENST00000487809 POTEBQ6S5H4 581 aa12.14□□□□□ -0.47
SUCLG1-206ENST00000487809 ZSWIM6Q9HCJ5 1215 aa12.1□□□□□ -0.47
SUCLG1-206ENST00000487809 SPNS2Q8IVW8 549 aa12.09□□□□□ -0.47
SUCLG1-206ENST00000487809 KRTAP3-3Q9BYR6 98 aa12.09□□□□□ -0.47
SUCLG1-206ENST00000487809 KRTAP3-2Q9BYR7 98 aa12.09□□□□□ -0.47
SUCLG1-206ENST00000487809 ERBB3P21860 1342 aa12.07□□□□□ -0.48
SUCLG1-206ENST00000487809 MMRN1Q13201 1228 aa12.05□□□□□ -0.48
SUCLG1-206ENST00000487809 ERCC6Q03468 1493 aa12.03□□□□□ -0.48
SUCLG1-206ENST00000487809 GPR153Q6NV75 609 aa12.03□□□□□ -0.48
SUCLG1-206ENST00000487809 KIF3CO14782 793 aa12.02□□□□□ -0.49
SUCLG1-206ENST00000487809 HS6ST3Q8IZP7 471 aa12.02□□□□□ -0.49
SUCLG1-206ENST00000487809 NCAPD3P42695 1498 aa12.02□□□□□ -0.49
SUCLG1-206ENST00000487809 C2orf72A6NCS6 295 aa12.01□□□□□ -0.49
SUCLG1-206ENST00000487809 VARS2Q5ST30 1063 aaKnown RBP12.01□□□□□ -0.49
SUCLG1-206ENST00000487809 CUX2O14529 1486 aa12.01□□□□□ -0.49
SUCLG1-206ENST00000487809 ATAD2BQ9ULI0 1458 aa11.97□□□□□ -0.49
SUCLG1-206ENST00000487809 PPP1R37O75864 691 aa11.97□□□□□ -0.49
SUCLG1-206ENST00000487809 ARSIQ5FYB1 569 aa11.96□□□□□ -0.49
SUCLG1-206ENST00000487809 TMC2Q8TDI7 906 aa11.95□□□□□ -0.5
SUCLG1-206ENST00000487809 CHGAP10645 457 aaKnown RBP11.92□□□□□ -0.5
SUCLG1-206ENST00000487809 ZNF687Q8N1G0 1237 aa11.92□□□□□ -0.5
SUCLG1-206ENST00000487809 KHSRPQ92945 711 aaKnown RBP eCLIP11.92□□□□□ -0.53e-11■■■■□ 25.9
SUCLG1-206ENST00000487809 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
SUCLG1-206ENST00000487809 NESP48681 1621 aa11.89□□□□□ -0.51
SUCLG1-206ENST00000487809 SMARCA2P51531 1590 aa11.88□□□□□ -0.51
SUCLG1-206ENST00000487809 SLC34A2O95436 690 aa11.88□□□□□ -0.51
SUCLG1-206ENST00000487809 NUDT7P0C024 238 aa11.86□□□□□ -0.51
SUCLG1-206ENST00000487809 HMGXB3Q12766 1538 aa11.86□□□□□ -0.51
SUCLG1-206ENST00000487809 PCDHGA4Q9Y5G9 962 aa11.85□□□□□ -0.51
SUCLG1-206ENST00000487809 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
SUCLG1-206ENST00000487809 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
SUCLG1-206ENST00000487809 NKX1-1Q15270 411 aaPredicted RBP11.83□□□□□ -0.52
SUCLG1-206ENST00000487809 BAZ1AQ9NRL2 1556 aaPredicted RBP11.8□□□□□ -0.52
SUCLG1-206ENST00000487809 RYDENQ9NUL5 291 aaKnown RBP11.8□□□□□ -0.52
SUCLG1-206ENST00000487809 FOXK1P85037 733 aa11.79□□□□□ -0.52
SUCLG1-206ENST00000487809 GPHNQ9NQX3 736 aaPredicted RBP11.79□□□□□ -0.52
SUCLG1-206ENST00000487809 LHX6Q9UPM6 363 aa11.79□□□□□ -0.52
SUCLG1-206ENST00000487809 RNF166Q96A37 237 aaPredicted RBP11.77□□□□□ -0.53
SUCLG1-206ENST00000487809 PLPP6Q8IY26 295 aa11.76□□□□□ -0.53
SUCLG1-206ENST00000487809 PTCD2Q8WV60 388 aaKnown RBP11.75□□□□□ -0.53
SUCLG1-206ENST00000487809 PDS5BQ9NTI5 1447 aa11.75□□□□□ -0.53
SUCLG1-206ENST00000487809 PBX2P40425 430 aa11.74□□□□□ -0.53
SUCLG1-206ENST00000487809 PTGER2P43116 358 aa11.74□□□□□ -0.53
SUCLG1-206ENST00000487809 DSG2Q14126 1118 aa11.74□□□□□ -0.53
SUCLG1-206ENST00000487809 MYT1LQ9UL68 1186 aa11.74□□□□□ -0.53
SUCLG1-206ENST00000487809 LSM11P83369 360 aaKnown RBP eCLIP11.73□□□□□ -0.53
SUCLG1-206ENST00000487809 MROH2BQ7Z745 1585 aa11.73□□□□□ -0.53
SUCLG1-206ENST00000487809 ANKRD13DQ6ZTN6 518 aa11.72□□□□□ -0.53
SUCLG1-206ENST00000487809 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.53
SUCLG1-206ENST00000487809 LAMC3Q9Y6N6 1575 aa11.71□□□□□ -0.53
SUCLG1-206ENST00000487809 PSDA5PKW4 1024 aaPredicted RBP11.7□□□□□ -0.54
SUCLG1-206ENST00000487809 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
SUCLG1-206ENST00000487809 CADPSQ9ULU8 1353 aa11.69□□□□□ -0.54
SUCLG1-206ENST00000487809 KDM4FA0A1W2PPD8 638 aa11.69□□□□□ -0.54
SUCLG1-206ENST00000487809 POTEEQ6S8J3 1075 aa11.68□□□□□ -0.54
SUCLG1-206ENST00000487809 CRISPLD2Q9H0B8 497 aa11.68□□□□□ -0.54
SUCLG1-206ENST00000487809 AXIN2Q9Y2T1 843 aa11.66□□□□□ -0.54
SUCLG1-206ENST00000487809 TBC1D12O60347 775 aa11.65□□□□□ -0.54
SUCLG1-206ENST00000487809 GTPBP6O43824 516 aaPredicted RBP11.64□□□□□ -0.55
SUCLG1-206ENST00000487809 PPP1R15BQ5SWA1 713 aa11.63□□□□□ -0.55
SUCLG1-206ENST00000487809 MRC2Q9UBG0 1479 aa11.62□□□□□ -0.55
SUCLG1-206ENST00000487809 NCKAP5LQ9HCH0 1330 aa11.61□□□□□ -0.55
SUCLG1-206ENST00000487809 ARHGAP33O14559 1287 aa11.61□□□□□ -0.55
SUCLG1-206ENST00000487809 KIF21AQ7Z4S6 1674 aa11.61□□□□□ -0.55
SUCLG1-206ENST00000487809 PPP4R3BQ5MIZ7 849 aa11.6□□□□□ -0.55
SUCLG1-206ENST00000487809 OXER1Q8TDS5 423 aa11.6□□□□□ -0.55
SUCLG1-206ENST00000487809 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.55
SUCLG1-206ENST00000487809 PDE4AP27815 886 aa11.58□□□□□ -0.56
SUCLG1-206ENST00000487809 ADGRD1Q6QNK2 874 aa11.57□□□□□ -0.56
SUCLG1-206ENST00000487809 WDR62O43379 1518 aa11.55□□□□□ -0.56
SUCLG1-206ENST00000487809 CEP164Q9UPV0 1460 aa11.54□□□□□ -0.56
SUCLG1-206ENST00000487809 WIZO95785 1651 aa11.53□□□□□ -0.56
SUCLG1-206ENST00000487809 FANCD2Q9BXW9 1451 aa11.53□□□□□ -0.56
SUCLG1-206ENST00000487809 PSEN2P49810 448 aa11.53□□□□□ -0.56
SUCLG1-206ENST00000487809 DMRTA1Q5VZB9 504 aa11.53□□□□□ -0.56
SUCLG1-206ENST00000487809 DDX27Q96GQ7 796 aaKnown RBP11.53□□□□□ -0.56
SUCLG1-206ENST00000487809 LARP6Q9BRS8 491 aaKnown RBP11.52□□□□□ -0.57
SUCLG1-206ENST00000487809 TK2O00142 265 aa11.51□□□□□ -0.57
SUCLG1-206ENST00000487809 MFSD10Q14728 455 aa11.51□□□□□ -0.57
SUCLG1-206ENST00000487809 ZNF454Q8N9F8 522 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms