RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 MIER1Q8N108 512 aa15.69■□□□□ 0.1
ABCA2-218ENST00000487109 PDS5BQ9NTI5 1447 aa15.69■□□□□ 0.1
ABCA2-218ENST00000487109 CFAP44Q96MT7 982 aa15.68■□□□□ 0.1
ABCA2-218ENST00000487109 U2SURPO15042 1029 aaKnown RBP15.68■□□□□ 0.1
ABCA2-218ENST00000487109 PDE4CQ08493 712 aa15.68■□□□□ 0.1
ABCA2-218ENST00000487109 TMX4Q9H1E5 349 aaPredicted RBP15.67■□□□□ 0.1
ABCA2-218ENST00000487109 KIAA1211Q6ZU35 1233 aa15.66■□□□□ 0.1
ABCA2-218ENST00000487109 CARMIL1Q5VZK9 1371 aa15.66■□□□□ 0.1
ABCA2-218ENST00000487109 TPM4P67936 248 aa15.66■□□□□ 0.1
ABCA2-218ENST00000487109 TIMELESSQ9UNS1 1208 aa15.66■□□□□ 0.1
ABCA2-218ENST00000487109 TMF1P82094 1093 aa15.65■□□□□ 0.1
ABCA2-218ENST00000487109 SPRYD3Q8NCJ5 442 aa15.65■□□□□ 0.1
ABCA2-218ENST00000487109 CUX2O14529 1486 aa15.65■□□□□ 0.1
ABCA2-218ENST00000487109 USP35Q9P2H5 1018 aa15.63■□□□□ 0.09
ABCA2-218ENST00000487109 PTMSP20962 102 aa15.62■□□□□ 0.09
ABCA2-218ENST00000487109 HTATSF1O43719 755 aaKnown RBP15.61■□□□□ 0.09
ABCA2-218ENST00000487109 ARHGAP35Q9NRY4 1499 aa15.61■□□□□ 0.09
ABCA2-218ENST00000487109 CEP89Q96ST8 783 aa15.61■□□□□ 0.09
ABCA2-218ENST00000487109 ARID3AQ99856 593 aa15.6■□□□□ 0.09
ABCA2-218ENST00000487109 CHMP4AQ9BY43 222 aa15.6■□□□□ 0.09
ABCA2-218ENST00000487109 KRI1Q8N9T8 703 aaKnown RBP15.6■□□□□ 0.09
ABCA2-218ENST00000487109 CC2D1BQ5T0F9 858 aaKnown RBP15.59■□□□□ 0.09
ABCA2-218ENST00000487109 RTF1Q92541 710 aaKnown RBP15.59■□□□□ 0.09
ABCA2-218ENST00000487109 PPP4R2Q9NY27 417 aa15.59■□□□□ 0.09
ABCA2-218ENST00000487109 CCDC34Q96HJ3 373 aa15.59■□□□□ 0.09
ABCA2-218ENST00000487109 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
ABCA2-218ENST00000487109 SYAP1Q96A49 352 aaPredicted RBP15.57■□□□□ 0.08
ABCA2-218ENST00000487109 FMN1Q68DA7 1419 aa15.57■□□□□ 0.08
ABCA2-218ENST00000487109 SOX12O15370 315 aa15.56■□□□□ 0.08
ABCA2-218ENST00000487109 GBP4Q96PP9 640 aa15.56■□□□□ 0.08
ABCA2-218ENST00000487109 HSP90B1P14625 803 aaKnown RBP15.56■□□□□ 0.08
ABCA2-218ENST00000487109 CREBRFQ8IUR6 639 aa15.55■□□□□ 0.08
ABCA2-218ENST00000487109 SETQ01105 290 aaPredicted RBP15.54■□□□□ 0.08
ABCA2-218ENST00000487109 CALD1Q05682 793 aaKnown RBP15.54■□□□□ 0.08
ABCA2-218ENST00000487109 RASSF8Q8NHQ8 419 aa15.54■□□□□ 0.08
ABCA2-218ENST00000487109 G3V3G9 751 aa15.54■□□□□ 0.08
ABCA2-218ENST00000487109 DCAF8Q5TAQ9 597 aa15.54■□□□□ 0.08
ABCA2-218ENST00000487109 HDGFL2Q7Z4V5 671 aaPredicted RBP15.52■□□□□ 0.08
ABCA2-218ENST00000487109 EIF3AQ14152 1382 aaKnown RBP15.52■□□□□ 0.08
ABCA2-218ENST00000487109 SRPK2P78362 688 aaKnown RBP15.52■□□□□ 0.07
ABCA2-218ENST00000487109 APBB1O00213 710 aa15.51■□□□□ 0.07
ABCA2-218ENST00000487109 GPATCH3Q96I76 525 aa15.51■□□□□ 0.07
ABCA2-218ENST00000487109 ZNF330Q9Y3S2 320 aaPredicted RBP15.51■□□□□ 0.07
ABCA2-218ENST00000487109 GORABQ5T7V8 394 aa15.5■□□□□ 0.07
ABCA2-218ENST00000487109 ANO8Q9HCE9 1232 aaPredicted RBP15.5■□□□□ 0.07
ABCA2-218ENST00000487109 DCAF11Q8TEB1 546 aa15.5■□□□□ 0.07
ABCA2-218ENST00000487109 VPS53Q5VIR6 699 aa15.49■□□□□ 0.07
ABCA2-218ENST00000487109 EFCAB2Q5VUJ9 269 aa15.49■□□□□ 0.07
ABCA2-218ENST00000487109 TPM3P06753 285 aa15.48■□□□□ 0.07
ABCA2-218ENST00000487109 CSPP1Q1MSJ5 1256 aa15.48■□□□□ 0.07
ABCA2-218ENST00000487109 RSPH4AQ5TD94 716 aa15.48■□□□□ 0.07
ABCA2-218ENST00000487109 SETD5Q9C0A6 1442 aa15.48■□□□□ 0.07
ABCA2-218ENST00000487109 TAF7LQ5H9L4 462 aa15.48■□□□□ 0.07
ABCA2-218ENST00000487109 SOGA1O94964 1423 aa15.48■□□□□ 0.07
ABCA2-218ENST00000487109 B4GALNT3Q6L9W6 998 aa15.47■□□□□ 0.07
ABCA2-218ENST00000487109 GZF1Q9H116 711 aaPredicted RBP15.47■□□□□ 0.07
ABCA2-218ENST00000487109 FBXO3Q9UK99 471 aa15.47■□□□□ 0.07
ABCA2-218ENST00000487109 MORC1Q86VD1 984 aa15.47■□□□□ 0.07
ABCA2-218ENST00000487109 CHMP3Q9Y3E7 222 aa15.47■□□□□ 0.07
ABCA2-218ENST00000487109 ANKRD30AQ9BXX3 1397 aa15.46■□□□□ 0.07
ABCA2-218ENST00000487109 IPO8O15397 1037 aaKnown RBP15.46■□□□□ 0.07
ABCA2-218ENST00000487109 VPS8Q8N3P4 1428 aa15.45■□□□□ 0.06
ABCA2-218ENST00000487109 DEKP35659 375 aaKnown RBP15.45■□□□□ 0.06
ABCA2-218ENST00000487109 MARCH6O60337 910 aa15.45■□□□□ 0.06
ABCA2-218ENST00000487109 HDAC5Q9UQL6 1122 aa15.44■□□□□ 0.06
ABCA2-218ENST00000487109 CALRP27797 417 aaKnown RBP15.44■□□□□ 0.06
ABCA2-218ENST00000487109 KTN1Q86UP2 1357 aaKnown RBP15.43■□□□□ 0.06
ABCA2-218ENST00000487109 PES1O00541 588 aaKnown RBP15.43■□□□□ 0.06
ABCA2-218ENST00000487109 MLECQ14165 292 aa15.43■□□□□ 0.06
ABCA2-218ENST00000487109 PAK3O75914 559 aaPredicted RBP15.42■□□□□ 0.06
ABCA2-218ENST00000487109 TSR1Q2NL82 804 aaKnown RBP15.42■□□□□ 0.06
ABCA2-218ENST00000487109 MYO15BQ96JP2 1530 aa15.42■□□□□ 0.06
ABCA2-218ENST00000487109 CCDC18Q5T9S5 1454 aa15.42■□□□□ 0.06
ABCA2-218ENST00000487109 PHF14O94880 888 aa15.41■□□□□ 0.06
ABCA2-218ENST00000487109 TOP2AP11388 1531 aaKnown RBP15.41■□□□□ 0.06
ABCA2-218ENST00000487109 TRIM6-TRIM34B2RNG4 842 aa15.41■□□□□ 0.06
ABCA2-218ENST00000487109 TPD52L1Q16890 204 aaPredicted RBP15.41■□□□□ 0.06
ABCA2-218ENST00000487109 CSB-PGBD3P0DP91 1061 aa15.41■□□□□ 0.06
ABCA2-218ENST00000487109 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
ABCA2-218ENST00000487109 CCDC88BA6NC98 1476 aa15.41■□□□□ 0.06
ABCA2-218ENST00000487109 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
ABCA2-218ENST00000487109 PATL2C9JE40 543 aaKnown RBP15.4■□□□□ 0.06
ABCA2-218ENST00000487109 EID1Q9Y6B2 187 aa15.4■□□□□ 0.06
ABCA2-218ENST00000487109 GGT6Q6P531 493 aa15.4■□□□□ 0.06
ABCA2-218ENST00000487109 CCER2I3L3R5 266 aa15.39■□□□□ 0.05
ABCA2-218ENST00000487109 WWC1Q8IX03 1113 aa15.39■□□□□ 0.05
ABCA2-218ENST00000487109 CNKSR2Q8WXI2 1034 aa15.38■□□□□ 0.05
ABCA2-218ENST00000487109 CCDC9Q9Y3X0 531 aaKnown RBP15.38■□□□□ 0.05
ABCA2-218ENST00000487109 ITPRIPQ8IWB1 547 aa15.37■□□□□ 0.05
ABCA2-218ENST00000487109 CCDC70Q6NSX1 233 aa15.37■□□□□ 0.05
ABCA2-218ENST00000487109 ROCK2O75116 1388 aaKnown RBP15.37■□□□□ 0.05
ABCA2-218ENST00000487109 TPM2P07951 284 aa15.37■□□□□ 0.05
ABCA2-218ENST00000487109 RALBP1Q15311 655 aa15.37■□□□□ 0.05
ABCA2-218ENST00000487109 TCEAL9Q9UHQ7 104 aa15.37■□□□□ 0.05
ABCA2-218ENST00000487109 FRAT2O75474 233 aaPredicted RBP15.36■□□□□ 0.05
ABCA2-218ENST00000487109 SPAG9O60271 1321 aaKnown RBP15.36■□□□□ 0.05
ABCA2-218ENST00000487109 SAFB2Q14151 953 aaKnown RBP eCLIP15.36■□□□□ 0.05
ABCA2-218ENST00000487109 PKD2Q13563 968 aa15.35■□□□□ 0.05
ABCA2-218ENST00000487109 SF3A1Q15459 793 aaKnown RBP15.35■□□□□ 0.05
ABCA2-218ENST00000487109 TERF2IPQ9NYB0 399 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms