RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 RICTORQ6R327 1708 aa35.62■■■■□ 3.29
CDHR3-212ENST00000487084 VPS8Q8N3P4 1428 aa35.61■■■■□ 3.29
CDHR3-212ENST00000487084 PREX2Q70Z35 1606 aa35.58■■■■□ 3.29
CDHR3-212ENST00000487084 POGZQ7Z3K3 1410 aa35.57■■■■□ 3.29
CDHR3-212ENST00000487084 CDC42BPBQ9Y5S2 1711 aa35.56■■■■□ 3.28
CDHR3-212ENST00000487084 EHBP1L1Q8N3D4 1523 aa35.52■■■■□ 3.28
CDHR3-212ENST00000487084 CDC42BPAQ5VT25 1732 aa35.51■■■■□ 3.27
CDHR3-212ENST00000487084 ZMYM4Q5VZL5 1548 aa35.51■■■■□ 3.27
CDHR3-212ENST00000487084 ARHGEF40Q8TER5 1519 aa35.51■■■■□ 3.27
CDHR3-212ENST00000487084 CCNB3Q8WWL7 1395 aa35.49■■■■□ 3.27
CDHR3-212ENST00000487084 GPATCH8Q9UKJ3 1502 aaKnown RBP35.47■■■■□ 3.27
CDHR3-212ENST00000487084 ZNF777Q9ULD5 760 aaPredicted RBP35.47■■■■□ 3.27
CDHR3-212ENST00000487084 ZFYVE16Q7Z3T8 1539 aa35.47■■■■□ 3.27
CDHR3-212ENST00000487084 ARID4BQ4LE39 1312 aaPredicted RBP35.45■■■■□ 3.27
CDHR3-212ENST00000487084 TIAM1Q13009 1591 aa35.45■■■■□ 3.27
CDHR3-212ENST00000487084 ZNF518AQ6AHZ1 1483 aa35.44■■■■□ 3.26
CDHR3-212ENST00000487084 YEATS2Q9ULM3 1422 aa35.44■■■■□ 3.26
CDHR3-212ENST00000487084 MAGI2Q86UL8 1455 aa35.43■■■■□ 3.26
CDHR3-212ENST00000487084 ABCC1P33527 1531 aa35.42■■■■□ 3.26
CDHR3-212ENST00000487084 AFAP1Q8N556 730 aa35.42■■■■□ 3.26
CDHR3-212ENST00000487084 CFDP1Q9UEE9 299 aaPredicted RBP35.41■■■■□ 3.26
CDHR3-212ENST00000487084 MYT1LQ9UL68 1186 aa35.4■■■■□ 3.26
CDHR3-212ENST00000487084 ARHGEF12Q9NZN5 1544 aa35.37■■■■□ 3.25
CDHR3-212ENST00000487084 SAMD9LQ8IVG5 1584 aa35.35■■■■□ 3.25
CDHR3-212ENST00000487084 TRAPPC8Q9Y2L5 1435 aa35.35■■■■□ 3.25
CDHR3-212ENST00000487084 KDM5CP41229 1560 aa35.34■■■■□ 3.25
CDHR3-212ENST00000487084 ITSN2Q9NZM3 1697 aa35.34■■■■□ 3.25
CDHR3-212ENST00000487084 SUPT6HQ7KZ85 1726 aaKnown RBP35.32■■■■□ 3.25
CDHR3-212ENST00000487084 NCOA2Q15596 1464 aa35.31■■■■□ 3.24
CDHR3-212ENST00000487084 SYCP2Q9BX26 1530 aa35.31■■■■□ 3.24
CDHR3-212ENST00000487084 LRRC9Q6ZRR7 1453 aa35.3■■■■□ 3.24
CDHR3-212ENST00000487084 HECW2Q9P2P5 1572 aa35.29■■■■□ 3.24
CDHR3-212ENST00000487084 HNRNPMP52272 730 aaKnown RBP eCLIP35.27■■■■□ 3.24
CDHR3-212ENST00000487084 ATP10AO60312 1499 aa35.27■■■■□ 3.24
CDHR3-212ENST00000487084 MAP3K1Q13233 1512 aa35.27■■■■□ 3.24
CDHR3-212ENST00000487084 APLP2Q06481 763 aa35.26■■■■□ 3.24
CDHR3-212ENST00000487084 PLEKHH2Q8IVE3 1493 aa35.26■■■■□ 3.23
CDHR3-212ENST00000487084 BCORL1Q5H9F3 1711 aa35.25■■■■□ 3.23
CDHR3-212ENST00000487084 C9orf84Q5VXU9 1444 aa35.24■■■■□ 3.23
CDHR3-212ENST00000487084 KANK4Q5T7N3 995 aaPredicted RBP35.24■■■■□ 3.23
CDHR3-212ENST00000487084 MLH3Q9UHC1 1453 aa35.22■■■■□ 3.23
CDHR3-212ENST00000487084 KIAA1107Q9UPP5 1409 aa35.22■■■■□ 3.23
CDHR3-212ENST00000487084 ADAMTSL3P82987 1691 aa35.21■■■■□ 3.23
CDHR3-212ENST00000487084 SIGLEC1Q9BZZ2 1709 aa35.21■■■■□ 3.23
CDHR3-212ENST00000487084 ZNF644Q9H582 1327 aaPredicted RBP35.21■■■■□ 3.23
CDHR3-212ENST00000487084 MLECQ14165 292 aa35.19■■■■□ 3.22
CDHR3-212ENST00000487084 DIP2CQ9Y2E4 1556 aa35.18■■■■□ 3.22
CDHR3-212ENST00000487084 ABCA6Q8N139 1617 aa35.16■■■■□ 3.22
CDHR3-212ENST00000487084 MADDQ8WXG6 1647 aa35.16■■■■□ 3.22
CDHR3-212ENST00000487084 SPAG9O60271 1321 aaKnown RBP35.15■■■■□ 3.22
CDHR3-212ENST00000487084 PTPRMP28827 1452 aa35.11■■■■□ 3.21
CDHR3-212ENST00000487084 KIDINS220Q9ULH0 1771 aa35.1■■■■□ 3.21
CDHR3-212ENST00000487084 CAMSAP2Q08AD1 1489 aa35.09■■■■□ 3.21
CDHR3-212ENST00000487084 MBD5Q9P267 1494 aa35.06■■■■□ 3.2
CDHR3-212ENST00000487084 ATP7AQ04656 1500 aa35.06■■■■□ 3.2
CDHR3-212ENST00000487084 RIMS1Q86UR5 1692 aaKnown RBP35.05■■■■□ 3.2
CDHR3-212ENST00000487084 REREQ9P2R6 1566 aa35.04■■■■□ 3.2
CDHR3-212ENST00000487084 INO80Q9ULG1 1556 aaPredicted RBP35.01■■■■□ 3.2
CDHR3-212ENST00000487084 PLPPR3Q6T4P5 718 aa35.01■■■■□ 3.2
CDHR3-212ENST00000487084 MYOM3Q5VTT5 1437 aa35■■■■□ 3.19
CDHR3-212ENST00000487084 CCDC141Q6ZP82 1450 aa34.97■■■■□ 3.19
CDHR3-212ENST00000487084 FER1L4A9Z1Z3 1794 aa34.97■■■■□ 3.19
CDHR3-212ENST00000487084 AGLP35573 1532 aa34.96■■■■□ 3.19
CDHR3-212ENST00000487084 MIA2Q96PC5 1412 aa34.93■■■■□ 3.18
CDHR3-212ENST00000487084 RSPH4AQ5TD94 716 aa34.92■■■■□ 3.18
CDHR3-212ENST00000487084 A2MP01023 1474 aa34.9■■■■□ 3.18
CDHR3-212ENST00000487084 RTEL1-TNFRSF6BF6WH68 1400 aa34.89■■■■□ 3.18
CDHR3-212ENST00000487084 ARHGEF5Q12774 1597 aa34.88■■■■□ 3.17
CDHR3-212ENST00000487084 TSPY4P0CV99 314 aa34.85■■■■□ 3.17
CDHR3-212ENST00000487084 TSPY10P0CW01 314 aa34.85■■■■□ 3.17
CDHR3-212ENST00000487084 ESF1Q9H501 851 aaKnown RBP34.85■■■■□ 3.17
CDHR3-212ENST00000487084 PLXNC1O60486 1568 aa34.83■■■■□ 3.17
CDHR3-212ENST00000487084 ADGBQ8N7X0 1667 aa34.82■■■■□ 3.17
CDHR3-212ENST00000487084 CEBPAP49715 358 aaPredicted RBP34.78■■■■□ 3.16
CDHR3-212ENST00000487084 PTPN23Q9H3S7 1636 aa34.77■■■■□ 3.16
CDHR3-212ENST00000487084 FGD6Q6ZV73 1430 aa34.77■■■■□ 3.16
CDHR3-212ENST00000487084 DHX29Q7Z478 1369 aaKnown RBP34.74■■■■□ 3.15
CDHR3-212ENST00000487084 GGT6Q6P531 493 aa34.74■■■■□ 3.15
CDHR3-212ENST00000487084 CNTLNQ9NXG0 1405 aa34.7■■■■□ 3.15
CDHR3-212ENST00000487084 MAST1Q9Y2H9 1570 aa34.69■■■■□ 3.14
CDHR3-212ENST00000487084 TCOF1Q13428 1488 aaKnown RBP34.67■■■■□ 3.14
CDHR3-212ENST00000487084 LMTK3Q96Q04 1460 aa34.67■■■■□ 3.14
CDHR3-212ENST00000487084 KIF3BO15066 747 aa34.66■■■■□ 3.14
CDHR3-212ENST00000487084 ABCC5O15440 1437 aa34.64■■■■□ 3.14
CDHR3-212ENST00000487084 PPARGC1BQ86YN6 1023 aaKnown RBP34.63■■■■□ 3.13
CDHR3-212ENST00000487084 C3P01024 1663 aa34.62■■■■□ 3.13
CDHR3-212ENST00000487084 DAPK1P53355 1430 aa34.62■■■■□ 3.13
CDHR3-212ENST00000487084 FAM50AQ14320 339 aaKnown RBP34.61■■■■□ 3.13
CDHR3-212ENST00000487084 SHANK2Q9UPX8 1470 aa34.59■■■■□ 3.13
CDHR3-212ENST00000487084 CROCC2H7BZ55 1655 aa34.59■■■■□ 3.13
CDHR3-212ENST00000487084 DNMT1P26358 1616 aaKnown RBP34.59■■■■□ 3.13
CDHR3-212ENST00000487084 CLTCQ00610 1675 aaKnown RBP34.58■■■■□ 3.13
CDHR3-212ENST00000487084 ZMYM3Q14202 1370 aa34.57■■■■□ 3.12
CDHR3-212ENST00000487084 HSPA2P54652 639 aa34.56■■■■□ 3.12
CDHR3-212ENST00000487084 PPP6R1Q9UPN7 881 aa34.56■■■■□ 3.12
CDHR3-212ENST00000487084 MROH2AA6NES4 1674 aa34.56■■■■□ 3.12
CDHR3-212ENST00000487084 CHIC2Q9UKJ5 165 aa34.53■■■■□ 3.12
CDHR3-212ENST00000487084 PREX1Q8TCU6 1659 aa34.53■■■■□ 3.12
CDHR3-212ENST00000487084 KIF15Q9NS87 1388 aa34.52■■■■□ 3.12
CDHR3-212ENST00000487084 UHRF1BP1Q6BDS2 1440 aa34.51■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms