RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 DENND4BO75064 1496 aaPredicted RBP23.96■■□□□ 1.43
HDHD3-203ENST00000485934 KANK4Q5T7N3 995 aaPredicted RBP23.96■■□□□ 1.43
HDHD3-203ENST00000485934 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
HDHD3-203ENST00000485934 RAPGEF3O95398 923 aa23.95■■□□□ 1.42
HDHD3-203ENST00000485934 GPATCH8Q9UKJ3 1502 aaKnown RBP23.94■■□□□ 1.42
HDHD3-203ENST00000485934 ADGRL1O94910 1474 aa23.94■■□□□ 1.42
HDHD3-203ENST00000485934 SCAPERQ9BY12 1400 aa23.94■■□□□ 1.42
HDHD3-203ENST00000485934 ZNF777Q9ULD5 760 aaPredicted RBP23.93■■□□□ 1.42
HDHD3-203ENST00000485934 NCOA2Q15596 1464 aa23.92■■□□□ 1.42
HDHD3-203ENST00000485934 SUPT6HQ7KZ85 1726 aaKnown RBP23.9■■□□□ 1.42
HDHD3-203ENST00000485934 PLEKHH2Q8IVE3 1493 aa23.88■■□□□ 1.41
HDHD3-203ENST00000485934 PREX2Q70Z35 1606 aa23.88■■□□□ 1.41
HDHD3-203ENST00000485934 RSPH4AQ5TD94 716 aa23.85■■□□□ 1.41
HDHD3-203ENST00000485934 KIAA1107Q9UPP5 1409 aa23.84■■□□□ 1.41
HDHD3-203ENST00000485934 POGZQ7Z3K3 1410 aa23.84■■□□□ 1.41
HDHD3-203ENST00000485934 ZNF518AQ6AHZ1 1483 aa23.83■■□□□ 1.41
HDHD3-203ENST00000485934 MAGI2Q86UL8 1455 aa23.82■■□□□ 1.4
HDHD3-203ENST00000485934 MYT1LQ9UL68 1186 aa23.82■■□□□ 1.4
HDHD3-203ENST00000485934 AFAP1Q8N556 730 aa23.81■■□□□ 1.4
HDHD3-203ENST00000485934 CDC42BPBQ9Y5S2 1711 aa23.81■■□□□ 1.4
HDHD3-203ENST00000485934 CDC42BPAQ5VT25 1732 aa23.8■■□□□ 1.4
HDHD3-203ENST00000485934 MIA2Q96PC5 1412 aa23.8■■□□□ 1.4
HDHD3-203ENST00000485934 ITSN2Q9NZM3 1697 aa23.79■■□□□ 1.4
HDHD3-203ENST00000485934 HNRNPMP52272 730 aaKnown RBP eCLIP23.79■■□□□ 1.4
HDHD3-203ENST00000485934 MYOM3Q5VTT5 1437 aa23.78■■□□□ 1.4
HDHD3-203ENST00000485934 ABCC1P33527 1531 aa23.76■■□□□ 1.39
HDHD3-203ENST00000485934 ZNF644Q9H582 1327 aaPredicted RBP23.75■■□□□ 1.39
HDHD3-203ENST00000485934 ZMYM4Q5VZL5 1548 aa23.74■■□□□ 1.39
HDHD3-203ENST00000485934 SPAG9O60271 1321 aaKnown RBP23.73■■□□□ 1.39
HDHD3-203ENST00000485934 TRAPPC8Q9Y2L5 1435 aa23.72■■□□□ 1.39
HDHD3-203ENST00000485934 FRMPD1Q5SYB0 1578 aa23.72■■□□□ 1.39
HDHD3-203ENST00000485934 SAMD9LQ8IVG5 1584 aa23.72■■□□□ 1.39
HDHD3-203ENST00000485934 RICTORQ6R327 1708 aa23.71■■□□□ 1.39
HDHD3-203ENST00000485934 ARHGEF12Q9NZN5 1544 aa23.71■■□□□ 1.39
HDHD3-203ENST00000485934 TSPY4P0CV99 314 aa23.71■■□□□ 1.39
HDHD3-203ENST00000485934 TSPY10P0CW01 314 aa23.71■■□□□ 1.39
HDHD3-203ENST00000485934 MLH3Q9UHC1 1453 aa23.7■■□□□ 1.38
HDHD3-203ENST00000485934 ZFYVE16Q7Z3T8 1539 aa23.69■■□□□ 1.38
HDHD3-203ENST00000485934 SYCP2Q9BX26 1530 aa23.69■■□□□ 1.38
HDHD3-203ENST00000485934 ARID4BQ4LE39 1312 aaPredicted RBP23.68■■□□□ 1.38
HDHD3-203ENST00000485934 KDM5CP41229 1560 aa23.68■■□□□ 1.38
HDHD3-203ENST00000485934 CAMSAP2Q08AD1 1489 aa23.67■■□□□ 1.38
HDHD3-203ENST00000485934 MBD5Q9P267 1494 aa23.66■■□□□ 1.38
HDHD3-203ENST00000485934 ATP10AO60312 1499 aa23.65■■□□□ 1.38
HDHD3-203ENST00000485934 FGD6Q6ZV73 1430 aa23.64■■□□□ 1.37
HDHD3-203ENST00000485934 YEATS2Q9ULM3 1422 aa23.63■■□□□ 1.37
HDHD3-203ENST00000485934 CCDC141Q6ZP82 1450 aa23.62■■□□□ 1.37
HDHD3-203ENST00000485934 RTEL1-TNFRSF6BF6WH68 1400 aa23.62■■□□□ 1.37
HDHD3-203ENST00000485934 ARHGEF40Q8TER5 1519 aa23.62■■□□□ 1.37
HDHD3-203ENST00000485934 HECW2Q9P2P5 1572 aa23.61■■□□□ 1.37
HDHD3-203ENST00000485934 C9orf84Q5VXU9 1444 aa23.6■■□□□ 1.37
HDHD3-203ENST00000485934 PPARGC1BQ86YN6 1023 aaKnown RBP23.59■■□□□ 1.37
HDHD3-203ENST00000485934 FAM50AQ14320 339 aaKnown RBP23.57■■□□□ 1.36
HDHD3-203ENST00000485934 ARHGEF5Q12774 1597 aa23.57■■□□□ 1.36
HDHD3-203ENST00000485934 AEBP2Q6ZN18 517 aaPredicted RBP23.56■■□□□ 1.36
HDHD3-203ENST00000485934 TCOF1Q13428 1488 aaKnown RBP23.56■■□□□ 1.36
HDHD3-203ENST00000485934 ATP7AQ04656 1500 aa23.54■■□□□ 1.36
HDHD3-203ENST00000485934 PTPN23Q9H3S7 1636 aa23.53■■□□□ 1.36
HDHD3-203ENST00000485934 KDM4FA0A1W2PPD8 638 aa23.53■■□□□ 1.36
HDHD3-203ENST00000485934 REREQ9P2R6 1566 aa23.49■■□□□ 1.35
HDHD3-203ENST00000485934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.49■■□□□ 1.35
HDHD3-203ENST00000485934 DIP2CQ9Y2E4 1556 aa23.48■■□□□ 1.35
HDHD3-203ENST00000485934 KIDINS220Q9ULH0 1771 aa23.47■■□□□ 1.35
HDHD3-203ENST00000485934 ESF1Q9H501 851 aaKnown RBP23.47■■□□□ 1.35
HDHD3-203ENST00000485934 DHX29Q7Z478 1369 aaKnown RBP23.47■■□□□ 1.35
HDHD3-203ENST00000485934 ABCC5O15440 1437 aa23.47■■□□□ 1.35
HDHD3-203ENST00000485934 A2MP01023 1474 aa23.47■■□□□ 1.35
HDHD3-203ENST00000485934 INO80Q9ULG1 1556 aaPredicted RBP23.47■■□□□ 1.35
HDHD3-203ENST00000485934 AGLP35573 1532 aa23.46■■□□□ 1.35
HDHD3-203ENST00000485934 DAPK1P53355 1430 aa23.46■■□□□ 1.35
HDHD3-203ENST00000485934 MLECQ14165 292 aa23.46■■□□□ 1.35
HDHD3-203ENST00000485934 SHANK2Q9UPX8 1470 aa23.45■■□□□ 1.34
HDHD3-203ENST00000485934 PPP6R1Q9UPN7 881 aa23.45■■□□□ 1.34
HDHD3-203ENST00000485934 ABCA6Q8N139 1617 aa23.44■■□□□ 1.34
HDHD3-203ENST00000485934 ANKRD30AQ9BXX3 1397 aa23.43■■□□□ 1.34
HDHD3-203ENST00000485934 MAST1Q9Y2H9 1570 aa23.42■■□□□ 1.34
HDHD3-203ENST00000485934 CHIC2Q9UKJ5 165 aa23.39■■□□□ 1.33
HDHD3-203ENST00000485934 DNMT1P26358 1616 aaKnown RBP23.38■■□□□ 1.33
HDHD3-203ENST00000485934 KIF3BO15066 747 aa23.38■■□□□ 1.33
HDHD3-203ENST00000485934 RRP7BPQ9NSQ0 103 aa23.38■■□□□ 1.33
HDHD3-203ENST00000485934 RRBP1Q9P2E9 1410 aaKnown RBP23.38■■□□□ 1.33
HDHD3-203ENST00000485934 GGT6Q6P531 493 aa23.37■■□□□ 1.33
HDHD3-203ENST00000485934 ADGBQ8N7X0 1667 aa23.37■■□□□ 1.33
HDHD3-203ENST00000485934 BCORL1Q5H9F3 1711 aa23.36■■□□□ 1.33
HDHD3-203ENST00000485934 KIF15Q9NS87 1388 aa23.36■■□□□ 1.33
HDHD3-203ENST00000485934 NCOA1Q15788 1441 aa23.33■■□□□ 1.33
HDHD3-203ENST00000485934 PLXNC1O60486 1568 aa23.33■■□□□ 1.33
HDHD3-203ENST00000485934 ITGAEP38570 1179 aa23.33■■□□□ 1.33
HDHD3-203ENST00000485934 CNTLNQ9NXG0 1405 aa23.33■■□□□ 1.32
HDHD3-203ENST00000485934 ADAMTSL3P82987 1691 aa23.32■■□□□ 1.32
HDHD3-203ENST00000485934 DUOX2Q9NRD8 1548 aa23.32■■□□□ 1.32
HDHD3-203ENST00000485934 ROCK1Q13464 1354 aa23.31■■□□□ 1.32
HDHD3-203ENST00000485934 ADGRL2O95490 1459 aa23.3■■□□□ 1.32
HDHD3-203ENST00000485934 PTPRMP28827 1452 aa23.29■■□□□ 1.32
HDHD3-203ENST00000485934 ERBINQ96RT1 1412 aa23.28■■□□□ 1.32
HDHD3-203ENST00000485934 CROCC2H7BZ55 1655 aa23.27■■□□□ 1.32
HDHD3-203ENST00000485934 SIGLEC1Q9BZZ2 1709 aa23.26■■□□□ 1.31
HDHD3-203ENST00000485934 WASHC2CQ9Y4E1 1318 aa23.26■■□□□ 1.31
HDHD3-203ENST00000485934 MADDQ8WXG6 1647 aa23.24■■□□□ 1.31
HDHD3-203ENST00000485934 PTPRKQ15262 1439 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms