RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 ATMINO43313 823 aaPredicted RBP8.59□□□□□ -1.03
FN1-222ENST00000485567 ATN1P54259 1190 aaPredicted RBP8.59□□□□□ -1.03
FN1-222ENST00000485567 IRX5P78411 483 aaPredicted RBP8.59□□□□□ -1.03
FN1-222ENST00000485567 EVX2Q03828 476 aa8.59□□□□□ -1.03
FN1-222ENST00000485567 ASTLQ6HA08 431 aaPredicted RBP8.59□□□□□ -1.03
FN1-222ENST00000485567 TMEM121BQ9BXQ6 578 aaPredicted RBP8.59□□□□□ -1.03
FN1-222ENST00000485567 OCEL1Q9H607 264 aa8.59□□□□□ -1.03
FN1-222ENST00000485567 SPDYE16A6NNV3 312 aaPredicted RBP8.57□□□□□ -1.04
FN1-222ENST00000485567 FOXK1P85037 733 aa8.57□□□□□ -1.04
FN1-222ENST00000485567 TMC2Q8TDI7 906 aa8.57□□□□□ -1.04
FN1-222ENST00000485567 ZMYND10O75800 440 aa8.56□□□□□ -1.04
FN1-222ENST00000485567 DSG2Q14126 1118 aa8.56□□□□□ -1.04
FN1-222ENST00000485567 BOLA1Q9Y3E2 137 aa8.56□□□□□ -1.04
FN1-222ENST00000485567 EMILIN3Q9NT22 766 aa8.55□□□□□ -1.04
FN1-222ENST00000485567 PDIA6Q15084 440 aa8.53□□□□□ -1.04
FN1-222ENST00000485567 GTF3C3Q9Y5Q9 886 aa8.53□□□□□ -1.04
FN1-222ENST00000485567 G3V3G9 751 aa8.52□□□□□ -1.05
FN1-222ENST00000485567 DPYSL4O14531 572 aa8.52□□□□□ -1.05
FN1-222ENST00000485567 KIF3CO14782 793 aa8.52□□□□□ -1.05
FN1-222ENST00000485567 MLLT3P42568 568 aaPredicted RBP8.52□□□□□ -1.05
FN1-222ENST00000485567 BRPF1P55201 1214 aaPredicted RBP8.52□□□□□ -1.05
FN1-222ENST00000485567 BARGINQ6ZT62 677 aa8.52□□□□□ -1.05
FN1-222ENST00000485567 L3MBTL3Q96JM7 780 aaPredicted RBP8.52□□□□□ -1.05
FN1-222ENST00000485567 SLC24A3Q9HC58 644 aa8.52□□□□□ -1.05
FN1-222ENST00000485567 PLCG2P16885 1265 aa8.51□□□□□ -1.05
FN1-222ENST00000485567 PLPP6Q8IY26 295 aa8.51□□□□□ -1.05
FN1-222ENST00000485567 C2orf72A6NCS6 295 aa8.49□□□□□ -1.05
FN1-222ENST00000485567 GABBR2O75899 941 aa8.48□□□□□ -1.05
FN1-222ENST00000485567 RBM26Q5T8P6 1007 aaKnown RBP8.48□□□□□ -1.05
FN1-222ENST00000485567 ERICH6Q7L0X2 663 aa8.48□□□□□ -1.05
FN1-222ENST00000485567 GPIHBP1Q8IV16 184 aa8.47□□□□□ -1.05
FN1-222ENST00000485567 NEUROD2Q15784 382 aa8.45□□□□□ -1.06
FN1-222ENST00000485567 POTEHQ6S545 545 aa8.45□□□□□ -1.06
FN1-222ENST00000485567 AK7Q96M32 723 aa8.45□□□□□ -1.06
FN1-222ENST00000485567 MAP3K9P80192 1104 aa8.44□□□□□ -1.06
FN1-222ENST00000485567 SEC24BO95487 1268 aa8.43□□□□□ -1.06
FN1-222ENST00000485567 SLC39A7Q92504 469 aa8.43□□□□□ -1.06
FN1-222ENST00000485567 DCBLD2Q96PD2 775 aa8.43□□□□□ -1.06
FN1-222ENST00000485567 TMEM92Q6UXU6 159 aa8.42□□□□□ -1.06
FN1-222ENST00000485567 PELP1Q8IZL8 1130 aaKnown RBP8.42□□□□□ -1.06
FN1-222ENST00000485567 KRI1Q8N9T8 703 aaKnown RBP8.42□□□□□ -1.06
FN1-222ENST00000485567 OXER1Q8TDS5 423 aa8.42□□□□□ -1.06
FN1-222ENST00000485567 C7P10643 843 aa8.41□□□□□ -1.06
FN1-222ENST00000485567 PTGER2P43116 358 aa8.41□□□□□ -1.06
FN1-222ENST00000485567 COLQQ9Y215 455 aaPredicted RBP8.41□□□□□ -1.06
FN1-222ENST00000485567 DAXXQ9UER7 740 aaPredicted RBP8.39□□□□□ -1.07
FN1-222ENST00000485567 TBC1D12O60347 775 aa8.38□□□□□ -1.07
FN1-222ENST00000485567 TIMELESSQ9UNS1 1208 aa8.38□□□□□ -1.07
FN1-222ENST00000485567 POTEFA5A3E0 1075 aa8.37□□□□□ -1.07
FN1-222ENST00000485567 GRXCR2A6NFK2 248 aa8.37□□□□□ -1.07
FN1-222ENST00000485567 GPR37O15354 613 aa8.37□□□□□ -1.07
FN1-222ENST00000485567 OSBPP22059 807 aa8.36□□□□□ -1.07
FN1-222ENST00000485567 UPF1Q92900 1129 aaKnown RBP eCLIP8.36□□□□□ -1.07
FN1-222ENST00000485567 TRIM66O15016 1216 aa8.35□□□□□ -1.07
FN1-222ENST00000485567 PTCD2Q8WV60 388 aaKnown RBP8.35□□□□□ -1.07
FN1-222ENST00000485567 MINK1Q8N4C8 1332 aaPredicted RBP8.34□□□□□ -1.07
FN1-222ENST00000485567 SLC34A2O95436 690 aa8.34□□□□□ -1.07
FN1-222ENST00000485567 EVI5O60447 810 aa8.33□□□□□ -1.08
FN1-222ENST00000485567 ANO8Q9HCE9 1232 aaPredicted RBP8.33□□□□□ -1.08
FN1-222ENST00000485567 METRNQ9UJH8 293 aa8.33□□□□□ -1.08
FN1-222ENST00000485567 NUTM2FA1L443 756 aa8.32□□□□□ -1.08
FN1-222ENST00000485567 PDE4DQ08499 809 aa8.32□□□□□ -1.08
FN1-222ENST00000485567 C3orf67Q6ZVT6 689 aa8.32□□□□□ -1.08
FN1-222ENST00000485567 FCHSD2O94868 740 aa8.31□□□□□ -1.08
FN1-222ENST00000485567 MAP2K5Q13163 448 aa8.31□□□□□ -1.08
FN1-222ENST00000485567 HIC1Q14526 733 aa8.31□□□□□ -1.08
FN1-222ENST00000485567 ZNF316A6NFI3 1004 aaPredicted RBP8.3□□□□□ -1.08
FN1-222ENST00000485567 GNPATO15228 680 aa8.3□□□□□ -1.08
FN1-222ENST00000485567 DDX12PQ92771 950 aa8.3□□□□□ -1.08
FN1-222ENST00000485567 IRF6O14896 467 aa8.29□□□□□ -1.08
FN1-222ENST00000485567 POTEIP0CG38 1075 aa8.29□□□□□ -1.08
FN1-222ENST00000485567 KDM4CQ9H3R0 1056 aa8.29□□□□□ -1.08
FN1-222ENST00000485567 GPBP1L1Q9HC44 474 aaPredicted RBP8.29□□□□□ -1.08
FN1-222ENST00000485567 C14orf37Q86TY3 774 aa8.26□□□□□ -1.09
FN1-222ENST00000485567 EPAS1Q99814 870 aa8.26□□□□□ -1.09
FN1-222ENST00000485567 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.26□□□□□ -1.09
FN1-222ENST00000485567 PHF14O94880 888 aa8.25□□□□□ -1.09
FN1-222ENST00000485567 PRIM1P49642 420 aaKnown RBP8.25□□□□□ -1.09
FN1-222ENST00000485567 PTGDRQ13258 359 aa8.25□□□□□ -1.09
FN1-222ENST00000485567 AMHR2Q16671 573 aa8.25□□□□□ -1.09
FN1-222ENST00000485567 CCDC102AQ96A19 550 aa8.25□□□□□ -1.09
FN1-222ENST00000485567 IL27Q8NEV9 243 aa8.24□□□□□ -1.09
FN1-222ENST00000485567 FECHP22830 423 aa8.21□□□□□ -1.1
FN1-222ENST00000485567 EN1Q05925 392 aaPredicted RBP8.21□□□□□ -1.1
FN1-222ENST00000485567 SP7Q8TDD2 431 aaPredicted RBP8.21□□□□□ -1.1
FN1-222ENST00000485567 PCDHGA4Q9Y5G9 962 aa8.21□□□□□ -1.1
FN1-222ENST00000485567 NPDC1Q9NQX5 325 aaPredicted RBP8.2□□□□□ -1.1
FN1-222ENST00000485567 KDM4FA0A1W2PPD8 638 aa8.19□□□□□ -1.1
FN1-222ENST00000485567 TYW1BQ6NUM6 668 aa8.19□□□□□ -1.1
FN1-222ENST00000485567 SLAIN1Q8ND83 568 aa8.19□□□□□ -1.1
FN1-222ENST00000485567 DDRGK1Q96HY6 314 aa8.19□□□□□ -1.1
FN1-222ENST00000485567 PCDHGA10Q9Y5H3 936 aa8.19□□□□□ -1.1
FN1-222ENST00000485567 PARP9Q8IXQ6 854 aa8.18□□□□□ -1.1
FN1-222ENST00000485567 FBXW7Q969H0 707 aa8.18□□□□□ -1.1
FN1-222ENST00000485567 FAM117AQ9C073 453 aa8.18□□□□□ -1.1
FN1-222ENST00000485567 MAP3K7O43318 606 aa8.17□□□□□ -1.1
FN1-222ENST00000485567 JPH4Q96JJ6 628 aa8.17□□□□□ -1.1
FN1-222ENST00000485567 PLEKHG3A1L390 1219 aa8.15□□□□□ -1.1
FN1-222ENST00000485567 CDHR5Q9HBB8 845 aa8.15□□□□□ -1.1
FN1-222ENST00000485567 FOSBP53539 338 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms