RNA–Protein interactions for RNA: ENST00000485515.5

SDHB-207, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-207ENST00000485515 CCNB3Q8WWL7 1395 aa19.88■□□□□ 0.77
SDHB-207ENST00000485515 EHBP1L1Q8N3D4 1523 aa19.87■□□□□ 0.77
SDHB-207ENST00000485515 CFDP1Q9UEE9 299 aaPredicted RBP19.84■□□□□ 0.77
SDHB-207ENST00000485515 ZNF777Q9ULD5 760 aaPredicted RBP19.84■□□□□ 0.77
SDHB-207ENST00000485515 PREX2Q70Z35 1606 aa19.84■□□□□ 0.77
SDHB-207ENST00000485515 TIAM1Q13009 1591 aa19.83■□□□□ 0.77
SDHB-207ENST00000485515 MYT1LQ9UL68 1186 aa19.82■□□□□ 0.76
SDHB-207ENST00000485515 CDC42BPBQ9Y5S2 1711 aa19.82■□□□□ 0.76
SDHB-207ENST00000485515 POGZQ7Z3K3 1410 aa19.81■□□□□ 0.76
SDHB-207ENST00000485515 MAP3K1Q13233 1512 aa19.81■□□□□ 0.76
SDHB-207ENST00000485515 GPATCH8Q9UKJ3 1502 aaKnown RBP19.81■□□□□ 0.76
SDHB-207ENST00000485515 RICTORQ6R327 1708 aa19.8■□□□□ 0.76
SDHB-207ENST00000485515 ZNF518AQ6AHZ1 1483 aa19.79■□□□□ 0.76
SDHB-207ENST00000485515 MAGI2Q86UL8 1455 aa19.79■□□□□ 0.76
SDHB-207ENST00000485515 CDC42BPAQ5VT25 1732 aa19.79■□□□□ 0.76
SDHB-207ENST00000485515 FRMPD1Q5SYB0 1578 aa19.79■□□□□ 0.76
SDHB-207ENST00000485515 SUPT6HQ7KZ85 1726 aaKnown RBP19.78■□□□□ 0.76
SDHB-207ENST00000485515 LRRC9Q6ZRR7 1453 aa19.78■□□□□ 0.76
SDHB-207ENST00000485515 ARID4BQ4LE39 1312 aaPredicted RBP19.77■□□□□ 0.76
SDHB-207ENST00000485515 ZMYM4Q5VZL5 1548 aa19.76■□□□□ 0.75
SDHB-207ENST00000485515 PLEKHH2Q8IVE3 1493 aa19.76■□□□□ 0.75
SDHB-207ENST00000485515 KDM4FA0A1W2PPD8 638 aa19.76■□□□□ 0.75
SDHB-207ENST00000485515 AFAP1Q8N556 730 aa19.76■□□□□ 0.75
SDHB-207ENST00000485515 NCOA2Q15596 1464 aa19.75■□□□□ 0.75
SDHB-207ENST00000485515 ITSN2Q9NZM3 1697 aa19.75■□□□□ 0.75
SDHB-207ENST00000485515 ZFYVE16Q7Z3T8 1539 aa19.74■□□□□ 0.75
SDHB-207ENST00000485515 ABCC1P33527 1531 aa19.73■□□□□ 0.75
SDHB-207ENST00000485515 ARHGEF40Q8TER5 1519 aa19.72■□□□□ 0.75
SDHB-207ENST00000485515 KANK4Q5T7N3 995 aaPredicted RBP19.72■□□□□ 0.75
SDHB-207ENST00000485515 KIAA1107Q9UPP5 1409 aa19.71■□□□□ 0.75
SDHB-207ENST00000485515 HNRNPMP52272 730 aaKnown RBP eCLIP19.7■□□□□ 0.74
SDHB-207ENST00000485515 SAMD9LQ8IVG5 1584 aa19.7■□□□□ 0.74
SDHB-207ENST00000485515 YEATS2Q9ULM3 1422 aa19.69■□□□□ 0.74
SDHB-207ENST00000485515 TRAPPC8Q9Y2L5 1435 aa19.69■□□□□ 0.74
SDHB-207ENST00000485515 KDM5CP41229 1560 aa19.68■□□□□ 0.74
SDHB-207ENST00000485515 SYCP2Q9BX26 1530 aa19.67■□□□□ 0.74
SDHB-207ENST00000485515 ARHGEF12Q9NZN5 1544 aa19.67■□□□□ 0.74
SDHB-207ENST00000485515 SPAG9O60271 1321 aaKnown RBP19.67■□□□□ 0.74
SDHB-207ENST00000485515 ATP10AO60312 1499 aa19.67■□□□□ 0.74
SDHB-207ENST00000485515 MLH3Q9UHC1 1453 aa19.67■□□□□ 0.74
SDHB-207ENST00000485515 HECW2Q9P2P5 1572 aa19.66■□□□□ 0.74
SDHB-207ENST00000485515 RSPH4AQ5TD94 716 aa19.66■□□□□ 0.74
SDHB-207ENST00000485515 C9orf84Q5VXU9 1444 aa19.65■□□□□ 0.74
SDHB-207ENST00000485515 ZNF644Q9H582 1327 aaPredicted RBP19.64■□□□□ 0.73
SDHB-207ENST00000485515 MYOM3Q5VTT5 1437 aa19.6■□□□□ 0.73
SDHB-207ENST00000485515 CAMSAP2Q08AD1 1489 aa19.6■□□□□ 0.73
SDHB-207ENST00000485515 MIA2Q96PC5 1412 aa19.59■□□□□ 0.73
SDHB-207ENST00000485515 TSPY4P0CV99 314 aa19.59■□□□□ 0.73
SDHB-207ENST00000485515 TSPY10P0CW01 314 aa19.59■□□□□ 0.73
SDHB-207ENST00000485515 MLECQ14165 292 aa19.58■□□□□ 0.72
SDHB-207ENST00000485515 BCORL1Q5H9F3 1711 aa19.56■□□□□ 0.72
SDHB-207ENST00000485515 MBD5Q9P267 1494 aa19.56■□□□□ 0.72
SDHB-207ENST00000485515 DIP2CQ9Y2E4 1556 aa19.56■□□□□ 0.72
SDHB-207ENST00000485515 CCDC141Q6ZP82 1450 aa19.55■□□□□ 0.72
SDHB-207ENST00000485515 ATP7AQ04656 1500 aa19.55■□□□□ 0.72
SDHB-207ENST00000485515 KIDINS220Q9ULH0 1771 aa19.55■□□□□ 0.72
SDHB-207ENST00000485515 ESF1Q9H501 851 aaKnown RBP19.54■□□□□ 0.72
SDHB-207ENST00000485515 ABCA6Q8N139 1617 aa19.54■□□□□ 0.72
SDHB-207ENST00000485515 REREQ9P2R6 1566 aa19.53■□□□□ 0.72
SDHB-207ENST00000485515 ADAMTSL3P82987 1691 aa19.53■□□□□ 0.72
SDHB-207ENST00000485515 RTEL1-TNFRSF6BF6WH68 1400 aa19.53■□□□□ 0.72
SDHB-207ENST00000485515 ARHGEF5Q12774 1597 aa19.5■□□□□ 0.71
SDHB-207ENST00000485515 INO80Q9ULG1 1556 aaPredicted RBP19.5■□□□□ 0.71
SDHB-207ENST00000485515 PTPRMP28827 1452 aa19.49■□□□□ 0.71
SDHB-207ENST00000485515 MADDQ8WXG6 1647 aa19.49■□□□□ 0.71
SDHB-207ENST00000485515 AGLP35573 1532 aa19.49■□□□□ 0.71
SDHB-207ENST00000485515 A2MP01023 1474 aa19.48■□□□□ 0.71
SDHB-207ENST00000485515 FGD6Q6ZV73 1430 aa19.48■□□□□ 0.71
SDHB-207ENST00000485515 SIGLEC1Q9BZZ2 1709 aa19.47■□□□□ 0.71
SDHB-207ENST00000485515 PTPN23Q9H3S7 1636 aa19.46■□□□□ 0.71
SDHB-207ENST00000485515 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
SDHB-207ENST00000485515 ADGBQ8N7X0 1667 aa19.45■□□□□ 0.7
SDHB-207ENST00000485515 RIMS1Q86UR5 1692 aaKnown RBP19.44■□□□□ 0.7
SDHB-207ENST00000485515 FER1L4A9Z1Z3 1794 aa19.43■□□□□ 0.7
SDHB-207ENST00000485515 FAM50AQ14320 339 aaKnown RBP19.43■□□□□ 0.7
SDHB-207ENST00000485515 DHX29Q7Z478 1369 aaKnown RBP19.43■□□□□ 0.7
SDHB-207ENST00000485515 GGT6Q6P531 493 aa19.41■□□□□ 0.7
SDHB-207ENST00000485515 PPARGC1BQ86YN6 1023 aaKnown RBP19.41■□□□□ 0.7
SDHB-207ENST00000485515 TCOF1Q13428 1488 aaKnown RBP19.41■□□□□ 0.7
SDHB-207ENST00000485515 PPP6R1Q9UPN7 881 aa19.4■□□□□ 0.7
SDHB-207ENST00000485515 CNTLNQ9NXG0 1405 aa19.39■□□□□ 0.69
SDHB-207ENST00000485515 PLXNC1O60486 1568 aa19.39■□□□□ 0.69
SDHB-207ENST00000485515 KIF3BO15066 747 aa19.38■□□□□ 0.69
SDHB-207ENST00000485515 MAST1Q9Y2H9 1570 aa19.38■□□□□ 0.69
SDHB-207ENST00000485515 SHANK2Q9UPX8 1470 aa19.36■□□□□ 0.69
SDHB-207ENST00000485515 ABCC5O15440 1437 aa19.36■□□□□ 0.69
SDHB-207ENST00000485515 DAPK1P53355 1430 aa19.36■□□□□ 0.69
SDHB-207ENST00000485515 DNMT1P26358 1616 aaKnown RBP19.34■□□□□ 0.69
SDHB-207ENST00000485515 ANKRD30AQ9BXX3 1397 aa19.33■□□□□ 0.69
SDHB-207ENST00000485515 CEBPAP49715 358 aaPredicted RBP19.33■□□□□ 0.68
SDHB-207ENST00000485515 RRP7BPQ9NSQ0 103 aa19.33■□□□□ 0.68
SDHB-207ENST00000485515 CHIC2Q9UKJ5 165 aa19.33■□□□□ 0.68
SDHB-207ENST00000485515 KIF15Q9NS87 1388 aa19.32■□□□□ 0.68
SDHB-207ENST00000485515 CROCC2H7BZ55 1655 aa19.3■□□□□ 0.68
SDHB-207ENST00000485515 DUOX2Q9NRD8 1548 aa19.3■□□□□ 0.68
SDHB-207ENST00000485515 WASHC2CQ9Y4E1 1318 aa19.29■□□□□ 0.68
SDHB-207ENST00000485515 ZMYM3Q14202 1370 aa19.29■□□□□ 0.68
SDHB-207ENST00000485515 MROH2AA6NES4 1674 aa19.26■□□□□ 0.67
SDHB-207ENST00000485515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.25■□□□□ 0.672e-7■■■■■ 28.8
SDHB-207ENST00000485515 EIF2AK4Q9P2K8 1649 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms