RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 LRRIQ1Q96JM4 1722 aa12.47□□□□□ -0.41
MACF1-220ENST00000485063 MAGI3Q5TCQ9 1506 aa12.46□□□□□ -0.42
MACF1-220ENST00000485063 KIF14Q15058 1648 aa12.42□□□□□ -0.42
MACF1-220ENST00000485063 TROQ12816 1431 aaPredicted RBP12.41□□□□□ -0.42
MACF1-220ENST00000485063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.41□□□□□ -0.42
MACF1-220ENST00000485063 CFAP74Q9C0B2 1584 aa12.4□□□□□ -0.42
MACF1-220ENST00000485063 PHLDB1Q86UU1 1377 aa12.4□□□□□ -0.42
MACF1-220ENST00000485063 MYO5CQ9NQX4 1742 aa12.4□□□□□ -0.43
MACF1-220ENST00000485063 TTC37Q6PGP7 1564 aa12.39□□□□□ -0.43
MACF1-220ENST00000485063 NEO1Q92859 1461 aa12.38□□□□□ -0.43
MACF1-220ENST00000485063 VPS8Q8N3P4 1428 aa12.37□□□□□ -0.43
MACF1-220ENST00000485063 FANCAO15360 1455 aa12.35□□□□□ -0.43
MACF1-220ENST00000485063 MTUS2Q5JR59 1369 aa12.35□□□□□ -0.43
MACF1-220ENST00000485063 ARAP3Q8WWN8 1544 aa12.35□□□□□ -0.43
MACF1-220ENST00000485063 U3KPZ7 1027 aaPredicted RBP12.34□□□□□ -0.43
MACF1-220ENST00000485063 PLCH2O75038 1416 aa12.34□□□□□ -0.43
MACF1-220ENST00000485063 COL17A1Q9UMD9 1497 aaPredicted RBP12.33□□□□□ -0.44
MACF1-220ENST00000485063 ARHGAP5Q13017 1502 aa12.32□□□□□ -0.44
MACF1-220ENST00000485063 AKNAQ7Z591 1439 aa12.32□□□□□ -0.44
MACF1-220ENST00000485063 APLP2Q06481 763 aa12.32□□□□□ -0.44
MACF1-220ENST00000485063 EFCAB2Q5VUJ9 269 aa12.32□□□□□ -0.44
MACF1-220ENST00000485063 EHBP1L1Q8N3D4 1523 aa12.32□□□□□ -0.44
MACF1-220ENST00000485063 TIAM1Q13009 1591 aa12.3□□□□□ -0.44
MACF1-220ENST00000485063 PREX2Q70Z35 1606 aa12.3□□□□□ -0.44
MACF1-220ENST00000485063 CDC42BPAQ5VT25 1732 aa12.3□□□□□ -0.44
MACF1-220ENST00000485063 CDC42BPBQ9Y5S2 1711 aa12.3□□□□□ -0.44
MACF1-220ENST00000485063 DENND4BO75064 1496 aaPredicted RBP12.29□□□□□ -0.44
MACF1-220ENST00000485063 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
MACF1-220ENST00000485063 ADGRL1O94910 1474 aa12.28□□□□□ -0.44
MACF1-220ENST00000485063 CCNB3Q8WWL7 1395 aa12.28□□□□□ -0.44
MACF1-220ENST00000485063 MAP3K1Q13233 1512 aa12.27□□□□□ -0.44
MACF1-220ENST00000485063 ITSN2Q9NZM3 1697 aa12.27□□□□□ -0.45
MACF1-220ENST00000485063 RAPGEF3O95398 923 aa12.27□□□□□ -0.45
MACF1-220ENST00000485063 RICTORQ6R327 1708 aa12.27□□□□□ -0.45
MACF1-220ENST00000485063 SCAPERQ9BY12 1400 aa12.27□□□□□ -0.45
MACF1-220ENST00000485063 KCNA4P22459 653 aa12.25□□□□□ -0.45
MACF1-220ENST00000485063 FRMPD1Q5SYB0 1578 aa12.24□□□□□ -0.45
MACF1-220ENST00000485063 LRRC9Q6ZRR7 1453 aa12.24□□□□□ -0.45
MACF1-220ENST00000485063 CFDP1Q9UEE9 299 aaPredicted RBP12.24□□□□□ -0.45
MACF1-220ENST00000485063 GPATCH8Q9UKJ3 1502 aaKnown RBP12.24□□□□□ -0.45
MACF1-220ENST00000485063 ZNF777Q9ULD5 760 aaPredicted RBP12.24□□□□□ -0.45
MACF1-220ENST00000485063 MYT1LQ9UL68 1186 aa12.23□□□□□ -0.45
MACF1-220ENST00000485063 ZNF518AQ6AHZ1 1483 aa12.22□□□□□ -0.45
MACF1-220ENST00000485063 NCOA2Q15596 1464 aa12.21□□□□□ -0.45
MACF1-220ENST00000485063 POGZQ7Z3K3 1410 aa12.21□□□□□ -0.45
MACF1-220ENST00000485063 ABCC1P33527 1531 aa12.21□□□□□ -0.46
MACF1-220ENST00000485063 ZMYM4Q5VZL5 1548 aa12.21□□□□□ -0.46
MACF1-220ENST00000485063 MAGI2Q86UL8 1455 aa12.21□□□□□ -0.46
MACF1-220ENST00000485063 PLEKHH2Q8IVE3 1493 aa12.21□□□□□ -0.46
MACF1-220ENST00000485063 SAMD9LQ8IVG5 1584 aa12.2□□□□□ -0.46
MACF1-220ENST00000485063 ZFYVE16Q7Z3T8 1539 aa12.19□□□□□ -0.46
MACF1-220ENST00000485063 ARHGEF40Q8TER5 1519 aa12.18□□□□□ -0.46
MACF1-220ENST00000485063 CAPN15O75808 1086 aa12.18□□□□□ -0.46
MACF1-220ENST00000485063 KANK4Q5T7N3 995 aaPredicted RBP12.18□□□□□ -0.46
MACF1-220ENST00000485063 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
MACF1-220ENST00000485063 DSG3P32926 999 aa12.17□□□□□ -0.46
MACF1-220ENST00000485063 AFAP1Q8N556 730 aa12.17□□□□□ -0.46
MACF1-220ENST00000485063 KDM5CP41229 1560 aa12.17□□□□□ -0.46
MACF1-220ENST00000485063 SYCP2Q9BX26 1530 aa12.16□□□□□ -0.46
MACF1-220ENST00000485063 ARID4BQ4LE39 1312 aaPredicted RBP12.16□□□□□ -0.46
MACF1-220ENST00000485063 SPINK5Q9NQ38 1064 aaPredicted RBP12.16□□□□□ -0.46
MACF1-220ENST00000485063 KIAA1107Q9UPP5 1409 aa12.16□□□□□ -0.46
MACF1-220ENST00000485063 HNRNPMP52272 730 aaKnown RBP eCLIP12.15□□□□□ -0.46
MACF1-220ENST00000485063 ARHGEF12Q9NZN5 1544 aa12.15□□□□□ -0.46
MACF1-220ENST00000485063 YEATS2Q9ULM3 1422 aa12.14□□□□□ -0.47
MACF1-220ENST00000485063 TRAPPC8Q9Y2L5 1435 aa12.14□□□□□ -0.47
MACF1-220ENST00000485063 MLH3Q9UHC1 1453 aa12.14□□□□□ -0.47
MACF1-220ENST00000485063 MYOM3Q5VTT5 1437 aa12.13□□□□□ -0.47
MACF1-220ENST00000485063 KDM4FA0A1W2PPD8 638 aa12.13□□□□□ -0.47
MACF1-220ENST00000485063 RSPH4AQ5TD94 716 aa12.13□□□□□ -0.47
MACF1-220ENST00000485063 ATP10AO60312 1499 aa12.13□□□□□ -0.47
MACF1-220ENST00000485063 CAMSAP2Q08AD1 1489 aa12.13□□□□□ -0.47
MACF1-220ENST00000485063 SPAG9O60271 1321 aaKnown RBP12.12□□□□□ -0.47
MACF1-220ENST00000485063 C9orf84Q5VXU9 1444 aa12.12□□□□□ -0.47
MACF1-220ENST00000485063 MIA2Q96PC5 1412 aa12.12□□□□□ -0.47
MACF1-220ENST00000485063 SLC4A2P04920 1241 aa12.12□□□□□ -0.47
MACF1-220ENST00000485063 ZNF644Q9H582 1327 aaPredicted RBP12.11□□□□□ -0.47
MACF1-220ENST00000485063 KIDINS220Q9ULH0 1771 aa12.11□□□□□ -0.47
MACF1-220ENST00000485063 BCORL1Q5H9F3 1711 aa12.11□□□□□ -0.47
MACF1-220ENST00000485063 ABCA6Q8N139 1617 aa12.1□□□□□ -0.47
MACF1-220ENST00000485063 DIP2CQ9Y2E4 1556 aa12.09□□□□□ -0.47
MACF1-220ENST00000485063 TSPY4P0CV99 314 aa12.09□□□□□ -0.47
MACF1-220ENST00000485063 TSPY10P0CW01 314 aa12.09□□□□□ -0.47
MACF1-220ENST00000485063 ATP7AQ04656 1500 aa12.09□□□□□ -0.47
MACF1-220ENST00000485063 CCDC141Q6ZP82 1450 aa12.08□□□□□ -0.47
MACF1-220ENST00000485063 ARHGEF5Q12774 1597 aa12.08□□□□□ -0.48
MACF1-220ENST00000485063 REREQ9P2R6 1566 aa12.08□□□□□ -0.48
MACF1-220ENST00000485063 INO80Q9ULG1 1556 aaPredicted RBP12.08□□□□□ -0.48
MACF1-220ENST00000485063 MBD5Q9P267 1494 aa12.08□□□□□ -0.48
MACF1-220ENST00000485063 PTPN23Q9H3S7 1636 aa12.08□□□□□ -0.48
MACF1-220ENST00000485063 ADAMTSL3P82987 1691 aa12.07□□□□□ -0.48
MACF1-220ENST00000485063 ADGBQ8N7X0 1667 aa12.06□□□□□ -0.48
MACF1-220ENST00000485063 RTEL1-TNFRSF6BF6WH68 1400 aa12.06□□□□□ -0.48
MACF1-220ENST00000485063 MLECQ14165 292 aa12.06□□□□□ -0.48
MACF1-220ENST00000485063 FGD6Q6ZV73 1430 aa12.05□□□□□ -0.48
MACF1-220ENST00000485063 SIGLEC1Q9BZZ2 1709 aa12.05□□□□□ -0.48
MACF1-220ENST00000485063 FER1L4A9Z1Z3 1794 aa12.05□□□□□ -0.48
MACF1-220ENST00000485063 MADDQ8WXG6 1647 aa12.04□□□□□ -0.48
MACF1-220ENST00000485063 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
MACF1-220ENST00000485063 RIMS1Q86UR5 1692 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms