RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 ARID3CA6NKF2 412 aa11.16□□□□□ -0.62
CAST-210ENST00000484552 FAM43BQ6ZT52 329 aaPredicted RBP11.16□□□□□ -0.62
CAST-210ENST00000484552 MFAP1P55081 439 aaKnown RBP11.15□□□□□ -0.62
CAST-210ENST00000484552 YTHDC1Q96MU7 727 aaKnown RBP11.15□□□□□ -0.62
CAST-210ENST00000484552 KCNG1Q9UIX4 513 aa11.15□□□□□ -0.62
CAST-210ENST00000484552 KDM4AO75164 1064 aa11.14□□□□□ -0.63
CAST-210ENST00000484552 CCDC125Q86Z20 511 aa11.14□□□□□ -0.63
CAST-210ENST00000484552 CHMP4BQ9H444 224 aaKnown RBP11.14□□□□□ -0.63
CAST-210ENST00000484552 HSP90AB4PQ58FF6 505 aa11.13□□□□□ -0.63
CAST-210ENST00000484552 ATAD2BQ9ULI0 1458 aa11.13□□□□□ -0.63
CAST-210ENST00000484552 APBB1O00213 710 aa11.12□□□□□ -0.63
CAST-210ENST00000484552 SMARCA4P51532 1647 aa11.11□□□□□ -0.63
CAST-210ENST00000484552 NEUROD2Q15784 382 aa11.11□□□□□ -0.63
CAST-210ENST00000484552 EXOC8Q8IYI6 725 aa11.11□□□□□ -0.63
CAST-210ENST00000484552 SMARCA2P51531 1590 aa11.1□□□□□ -0.63
CAST-210ENST00000484552 HMGXB3Q12766 1538 aa11.1□□□□□ -0.63
CAST-210ENST00000484552 TRAIPQ9BWF2 469 aa11.09□□□□□ -0.63
CAST-210ENST00000484552 CADPSQ9ULU8 1353 aa11.08□□□□□ -0.64
CAST-210ENST00000484552 BAZ1AQ9NRL2 1556 aaPredicted RBP11.08□□□□□ -0.64
CAST-210ENST00000484552 FAM193AP78312 1265 aa11.08□□□□□ -0.64
CAST-210ENST00000484552 AEBP1Q8IUX7 1158 aa11.08□□□□□ -0.64
CAST-210ENST00000484552 PHF14O94880 888 aa11.06□□□□□ -0.64
CAST-210ENST00000484552 OS9Q13438 667 aaPredicted RBP11.06□□□□□ -0.64
CAST-210ENST00000484552 PLEKHD1A6NEE1 506 aa11.05□□□□□ -0.64
CAST-210ENST00000484552 PEG3Q9GZU2 1588 aa11.05□□□□□ -0.64
CAST-210ENST00000484552 LOC102724159A0A0B4J2E5 919 aa11.05□□□□□ -0.64
CAST-210ENST00000484552 DSG3P32926 999 aa11.05□□□□□ -0.64
CAST-210ENST00000484552 PWP2Q15269 919 aaKnown RBP11.05□□□□□ -0.64
CAST-210ENST00000484552 RTL5Q5HYW3 569 aaPredicted RBP11.05□□□□□ -0.64
CAST-210ENST00000484552 CLGNO14967 610 aa11.03□□□□□ -0.64
CAST-210ENST00000484552 VGFO15240 615 aaPredicted RBP11.03□□□□□ -0.64
CAST-210ENST00000484552 CANXP27824 592 aaKnown RBP11.03□□□□□ -0.64
CAST-210ENST00000484552 GTF2E1P29083 439 aaPredicted RBP11.03□□□□□ -0.64
CAST-210ENST00000484552 BAZ1BQ9UIG0 1483 aaKnown RBP11.02□□□□□ -0.65
CAST-210ENST00000484552 NEUROD1Q13562 356 aa11.01□□□□□ -0.65
CAST-210ENST00000484552 CNGB1Q14028 1251 aaPredicted RBP11.01□□□□□ -0.65
CAST-210ENST00000484552 CAPN15O75808 1086 aa11□□□□□ -0.65
CAST-210ENST00000484552 TMTC2Q8N394 836 aa11□□□□□ -0.65
CAST-210ENST00000484552 ZNF622Q969S3 477 aaKnown RBP eCLIP11□□□□□ -0.654e-8■■■□□ 14.8
CAST-210ENST00000484552 CUX2O14529 1486 aa11□□□□□ -0.65
CAST-210ENST00000484552 GZF1Q9H116 711 aaPredicted RBP11□□□□□ -0.65
CAST-210ENST00000484552 RIPOR2Q9Y4F9 1068 aa11□□□□□ -0.65
CAST-210ENST00000484552 LAS1LQ9Y4W2 734 aaKnown RBP11□□□□□ -0.65
CAST-210ENST00000484552 ERCC6Q03468 1493 aa11□□□□□ -0.65
CAST-210ENST00000484552 MROH2BQ7Z745 1585 aa10.98□□□□□ -0.65
CAST-210ENST00000484552 FAM50AQ14320 339 aaKnown RBP10.98□□□□□ -0.65
CAST-210ENST00000484552 ZNF316A6NFI3 1004 aaPredicted RBP10.98□□□□□ -0.65
CAST-210ENST00000484552 PATL2C9JE40 543 aaKnown RBP10.95□□□□□ -0.66
CAST-210ENST00000484552 NESP48681 1621 aa10.95□□□□□ -0.66
CAST-210ENST00000484552 STAC3Q96MF2 364 aa10.93□□□□□ -0.66
CAST-210ENST00000484552 SPTY2D1Q68D10 685 aaPredicted RBP10.93□□□□□ -0.66
CAST-210ENST00000484552 CCDC82Q8N4S0 544 aa10.92□□□□□ -0.66
CAST-210ENST00000484552 MMP14P50281 582 aa10.91□□□□□ -0.66
CAST-210ENST00000484552 AXDND1Q5T1B0 1012 aaPredicted RBP10.91□□□□□ -0.66
CAST-210ENST00000484552 NOL8Q76FK4 1167 aaKnown RBP10.91□□□□□ -0.66
CAST-210ENST00000484552 PPARGC1BQ86YN6 1023 aaKnown RBP10.91□□□□□ -0.66
CAST-210ENST00000484552 LAMC3Q9Y6N6 1575 aa10.91□□□□□ -0.66
CAST-210ENST00000484552 SGSM3Q96HU1 749 aa10.9□□□□□ -0.66
CAST-210ENST00000484552 SPINK5Q9NQ38 1064 aaPredicted RBP10.9□□□□□ -0.66
CAST-210ENST00000484552 U3KPZ7 1027 aaPredicted RBP10.9□□□□□ -0.66
CAST-210ENST00000484552 ANKRD13AQ8IZ07 590 aa10.89□□□□□ -0.67
CAST-210ENST00000484552 FAM9BQ8IZU0 186 aa10.89□□□□□ -0.67
CAST-210ENST00000484552 LMOD2Q6P5Q4 547 aa10.88□□□□□ -0.67
CAST-210ENST00000484552 MYH16Q9H6N6 1097 aa10.88□□□□□ -0.67
CAST-210ENST00000484552 RSF1Q96T23 1441 aaPredicted RBP10.88□□□□□ -0.67
CAST-210ENST00000484552 BRD1O95696 1058 aa10.88□□□□□ -0.67
CAST-210ENST00000484552 THOC2Q8NI27 1593 aaKnown RBP10.86□□□□□ -0.67
CAST-210ENST00000484552 IFNLR1Q8IU57 520 aaPredicted RBP10.85□□□□□ -0.67
CAST-210ENST00000484552 PDS5BQ9NTI5 1447 aa10.84□□□□□ -0.67
CAST-210ENST00000484552 SMARCA5O60264 1052 aaPredicted RBP10.83□□□□□ -0.68
CAST-210ENST00000484552 ANP32BQ92688 251 aaKnown RBP10.82□□□□□ -0.68
CAST-210ENST00000484552 WIZO95785 1651 aa10.82□□□□□ -0.68
CAST-210ENST00000484552 TTC36A6NLP5 189 aa10.81□□□□□ -0.68
CAST-210ENST00000484552 FOXD4L6Q3SYB3 417 aaPredicted RBP10.81□□□□□ -0.68
CAST-210ENST00000484552 FOXD4L3Q6VB84 417 aaPredicted RBP10.81□□□□□ -0.68
CAST-210ENST00000484552 TSHZ1Q6ZSZ6 1077 aa10.81□□□□□ -0.68
CAST-210ENST00000484552 SPATA32Q96LK8 384 aa10.81□□□□□ -0.68
CAST-210ENST00000484552 NBPF11Q86T75 865 aa10.8□□□□□ -0.68
CAST-210ENST00000484552 TERF2IPQ9NYB0 399 aa10.8□□□□□ -0.68
CAST-210ENST00000484552 TPD52L2O43399 206 aaKnown RBP10.8□□□□□ -0.68
CAST-210ENST00000484552 VASPP50552 380 aaPredicted RBP10.79□□□□□ -0.68
CAST-210ENST00000484552 CEP120Q8N960 986 aa10.79□□□□□ -0.68
CAST-210ENST00000484552 KIF21AQ7Z4S6 1674 aa10.79□□□□□ -0.68
CAST-210ENST00000484552 RRP9O43818 475 aaKnown RBP10.78□□□□□ -0.68
CAST-210ENST00000484552 MARCH6O60337 910 aa10.78□□□□□ -0.68
CAST-210ENST00000484552 NBPF1Q3BBV0 1214 aa10.78□□□□□ -0.68
CAST-210ENST00000484552 GORABQ5T7V8 394 aa10.78□□□□□ -0.68
CAST-210ENST00000484552 CCER1Q8TC90 406 aaPredicted RBP10.78□□□□□ -0.68
CAST-210ENST00000484552 FBXW7Q969H0 707 aa10.78□□□□□ -0.68
CAST-210ENST00000484552 NBPF20Q3BBV1 942 aa10.77□□□□□ -0.68
CAST-210ENST00000484552 RINLQ6ZS11 566 aa10.77□□□□□ -0.68
CAST-210ENST00000484552 NME8Q8N427 588 aa10.77□□□□□ -0.69
CAST-210ENST00000484552 TRIM44Q96DX7 344 aaPredicted RBP10.77□□□□□ -0.69
CAST-210ENST00000484552 ERCC3P19447 782 aa10.76□□□□□ -0.69
CAST-210ENST00000484552 HDAC5Q9UQL6 1122 aa10.76□□□□□ -0.69
CAST-210ENST00000484552 AMOTL2Q9Y2J4 779 aa10.76□□□□□ -0.69
CAST-210ENST00000484552 PPME1Q9Y570 386 aa10.76□□□□□ -0.69
CAST-210ENST00000484552 CALD1Q05682 793 aaKnown RBP10.75□□□□□ -0.69
CAST-210ENST00000484552 CASC1Q6TDU7 716 aa10.75□□□□□ -0.69
CAST-210ENST00000484552 SLC24A3Q9HC58 644 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms