RNA–Protein interactions for RNA: ENST00000484358.1

RPL3-216, Transcript of ribosomal protein L3, humanhuman

TSL 2

Gene RPL3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-216ENST00000484358 KCNH8Q96L42 1107 aa20.43■□□□□ 0.86
RPL3-216ENST00000484358 CFDP1Q9UEE9 299 aaPredicted RBP20.42■□□□□ 0.86
RPL3-216ENST00000484358 TCOF1Q13428 1488 aaKnown RBP20.42■□□□□ 0.86
RPL3-216ENST00000484358 FAM50AQ14320 339 aaKnown RBP20.41■□□□□ 0.86
RPL3-216ENST00000484358 ARAP3Q8WWN8 1544 aa20.41■□□□□ 0.86
RPL3-216ENST00000484358 TTC37Q6PGP7 1564 aa20.41■□□□□ 0.86
RPL3-216ENST00000484358 ABCA9Q8IUA7 1624 aa20.41■□□□□ 0.86
RPL3-216ENST00000484358 CDC42BPBQ9Y5S2 1711 aa20.36■□□□□ 0.85
RPL3-216ENST00000484358 ARHGAP5Q13017 1502 aa20.35■□□□□ 0.85
RPL3-216ENST00000484358 PLEKHH2Q8IVE3 1493 aa20.35■□□□□ 0.85
RPL3-216ENST00000484358 PLCH2O75038 1416 aa20.35■□□□□ 0.85
RPL3-216ENST00000484358 CAMSAP2Q08AD1 1489 aa20.33■□□□□ 0.85
RPL3-216ENST00000484358 GLI2P10070 1586 aa20.33■□□□□ 0.84
RPL3-216ENST00000484358 EFCAB2Q5VUJ9 269 aa20.32■□□□□ 0.84
RPL3-216ENST00000484358 CFAP74Q9C0B2 1584 aa20.32■□□□□ 0.84
RPL3-216ENST00000484358 KDM4FA0A1W2PPD8 638 aa20.29■□□□□ 0.84
RPL3-216ENST00000484358 RSPH4AQ5TD94 716 aa20.29■□□□□ 0.84
RPL3-216ENST00000484358 DNMT1P26358 1616 aaKnown RBP20.28■□□□□ 0.84
RPL3-216ENST00000484358 ZNF777Q9ULD5 760 aaPredicted RBP20.28■□□□□ 0.84
RPL3-216ENST00000484358 CD109Q6YHK3 1445 aa20.27■□□□□ 0.84
RPL3-216ENST00000484358 ARHGEF5Q12774 1597 aa20.26■□□□□ 0.83
RPL3-216ENST00000484358 KIAA1107Q9UPP5 1409 aa20.26■□□□□ 0.83
RPL3-216ENST00000484358 SAMD9LQ8IVG5 1584 aa20.25■□□□□ 0.83
RPL3-216ENST00000484358 ITGAEP38570 1179 aa20.24■□□□□ 0.83
RPL3-216ENST00000484358 FANCAO15360 1455 aa20.24■□□□□ 0.83
RPL3-216ENST00000484358 MAP3K4Q9Y6R4 1608 aa20.24■□□□□ 0.83
RPL3-216ENST00000484358 PPRC1Q5VV67 1664 aaKnown RBP20.23■□□□□ 0.83
RPL3-216ENST00000484358 DAPK1P53355 1430 aa20.23■□□□□ 0.83
RPL3-216ENST00000484358 TEX14Q8IWB6 1497 aa20.23■□□□□ 0.83
RPL3-216ENST00000484358 CROCC2H7BZ55 1655 aa20.22■□□□□ 0.83
RPL3-216ENST00000484358 SHANK2Q9UPX8 1470 aa20.21■□□□□ 0.83
RPL3-216ENST00000484358 ZNF644Q9H582 1327 aaPredicted RBP20.21■□□□□ 0.83
RPL3-216ENST00000484358 AKNAQ7Z591 1439 aa20.2■□□□□ 0.82
RPL3-216ENST00000484358 CCDC141Q6ZP82 1450 aa20.2■□□□□ 0.82
RPL3-216ENST00000484358 ABCC1P33527 1531 aa20.2■□□□□ 0.82
RPL3-216ENST00000484358 NEO1Q92859 1461 aa20.19■□□□□ 0.82
RPL3-216ENST00000484358 ADGBQ8N7X0 1667 aa20.19■□□□□ 0.82
RPL3-216ENST00000484358 ABCC5O15440 1437 aa20.19■□□□□ 0.82
RPL3-216ENST00000484358 SYCP2Q9BX26 1530 aa20.18■□□□□ 0.82
RPL3-216ENST00000484358 TSPY4P0CV99 314 aa20.18■□□□□ 0.82
RPL3-216ENST00000484358 TSPY10P0CW01 314 aa20.18■□□□□ 0.82
RPL3-216ENST00000484358 ROCK1Q13464 1354 aa20.18■□□□□ 0.82
RPL3-216ENST00000484358 ACIN1Q9UKV3 1341 aaKnown RBP20.17■□□□□ 0.82
RPL3-216ENST00000484358 MBD5Q9P267 1494 aa20.16■□□□□ 0.82
RPL3-216ENST00000484358 ADGRL1O94910 1474 aa20.15■□□□□ 0.82
RPL3-216ENST00000484358 HFM1A2PYH4 1435 aa20.14■□□□□ 0.81
RPL3-216ENST00000484358 ADGRL2O95490 1459 aa20.13■□□□□ 0.81
RPL3-216ENST00000484358 SETD5Q9C0A6 1442 aa20.13■□□□□ 0.81
RPL3-216ENST00000484358 GCC2Q8IWJ2 1684 aa20.13■□□□□ 0.81
RPL3-216ENST00000484358 MAST1Q9Y2H9 1570 aa20.12■□□□□ 0.81
RPL3-216ENST00000484358 C9orf84Q5VXU9 1444 aa20.12■□□□□ 0.81
RPL3-216ENST00000484358 ANKRD30AQ9BXX3 1397 aa20.12■□□□□ 0.81
RPL3-216ENST00000484358 HNRNPMP52272 730 aaKnown RBP eCLIP20.12■□□□□ 0.813e-6■■■■□ 21.9
RPL3-216ENST00000484358 PTPRKQ15262 1439 aa20.11■□□□□ 0.81
RPL3-216ENST00000484358 HRCP23327 699 aa20.11■□□□□ 0.81
RPL3-216ENST00000484358 COL17A1Q9UMD9 1497 aaPredicted RBP20.11■□□□□ 0.81
RPL3-216ENST00000484358 SCAPERQ9BY12 1400 aa20.09■□□□□ 0.81
RPL3-216ENST00000484358 ZNF518AQ6AHZ1 1483 aa20.08■□□□□ 0.81
RPL3-216ENST00000484358 CHIC2Q9UKJ5 165 aa20.07■□□□□ 0.8
RPL3-216ENST00000484358 ARHGEF12Q9NZN5 1544 aa20.07■□□□□ 0.8
RPL3-216ENST00000484358 RTEL1-TNFRSF6BF6WH68 1400 aa20.06■□□□□ 0.8
RPL3-216ENST00000484358 NAIPQ13075 1403 aa20.06■□□□□ 0.8
RPL3-216ENST00000484358 NCOA1Q15788 1441 aa20.06■□□□□ 0.8
RPL3-216ENST00000484358 PLXNC1O60486 1568 aa20.05■□□□□ 0.8
RPL3-216ENST00000484358 RAB3GAP2Q9H2M9 1393 aa20.04■□□□□ 0.8
RPL3-216ENST00000484358 DENND4BO75064 1496 aaPredicted RBP20.04■□□□□ 0.8
RPL3-216ENST00000484358 SPAG9O60271 1321 aaKnown RBP20.03■□□□□ 0.8
RPL3-216ENST00000484358 POGZQ7Z3K3 1410 aa20.03■□□□□ 0.8
RPL3-216ENST00000484358 TRAPPC8Q9Y2L5 1435 aa20.03■□□□□ 0.8
RPL3-216ENST00000484358 RRP7BPQ9NSQ0 103 aa20.02■□□□□ 0.8
RPL3-216ENST00000484358 KDM5CP41229 1560 aa20■□□□□ 0.79
RPL3-216ENST00000484358 KIF15Q9NS87 1388 aa19.99■□□□□ 0.79
RPL3-216ENST00000484358 INO80Q9ULG1 1556 aaPredicted RBP19.99■□□□□ 0.79
RPL3-216ENST00000484358 ATP7AQ04656 1500 aa19.98■□□□□ 0.79
RPL3-216ENST00000484358 ZFYVE16Q7Z3T8 1539 aa19.98■□□□□ 0.79
RPL3-216ENST00000484358 DUOX2Q9NRD8 1548 aa19.97■□□□□ 0.79
RPL3-216ENST00000484358 RICTORQ6R327 1708 aa19.97■□□□□ 0.79
RPL3-216ENST00000484358 HECW2Q9P2P5 1572 aa19.97■□□□□ 0.79
RPL3-216ENST00000484358 AFAP1Q8N556 730 aa19.97■□□□□ 0.79
RPL3-216ENST00000484358 MLH3Q9UHC1 1453 aa19.96■□□□□ 0.79
RPL3-216ENST00000484358 ANKRD50Q9ULJ7 1429 aa19.95■□□□□ 0.78
RPL3-216ENST00000484358 MYT1LQ9UL68 1186 aa19.95■□□□□ 0.78
RPL3-216ENST00000484358 CCER1Q8TC90 406 aaPredicted RBP19.94■□□□□ 0.78
RPL3-216ENST00000484358 ERBINQ96RT1 1412 aa19.93■□□□□ 0.78
RPL3-216ENST00000484358 MAGI2Q86UL8 1455 aa19.92■□□□□ 0.78
RPL3-216ENST00000484358 ZMYM4Q5VZL5 1548 aa19.92■□□□□ 0.78
RPL3-216ENST00000484358 KIDINS220Q9ULH0 1771 aa19.91■□□□□ 0.78
RPL3-216ENST00000484358 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
RPL3-216ENST00000484358 EIF2AK4Q9P2K8 1649 aaKnown RBP19.87■□□□□ 0.77
RPL3-216ENST00000484358 FRMPD1Q5SYB0 1578 aa19.87■□□□□ 0.77
RPL3-216ENST00000484358 RAPGEF3O95398 923 aa19.86■□□□□ 0.77
RPL3-216ENST00000484358 ZEB1P37275 1124 aaPredicted RBP19.86■□□□□ 0.77
RPL3-216ENST00000484358 DHX57Q6P158 1386 aaKnown RBP19.85■□□□□ 0.77
RPL3-216ENST00000484358 ILDR1Q86SU0 546 aaPredicted RBP19.85■□□□□ 0.77
RPL3-216ENST00000484358 TRIM52Q96A61 297 aa19.85■□□□□ 0.77
RPL3-216ENST00000484358 DHX29Q7Z478 1369 aaKnown RBP19.84■□□□□ 0.77
RPL3-216ENST00000484358 A2MP01023 1474 aa19.83■□□□□ 0.76
RPL3-216ENST00000484358 UNC13BO14795 1591 aa19.82■□□□□ 0.76
RPL3-216ENST00000484358 KDM5DQ9BY66 1539 aa19.81■□□□□ 0.76
RPL3-216ENST00000484358 ABCA6Q8N139 1617 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms