RNA–Protein interactions for RNA: ENST00000483827.1

ZC3HC1-210, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 5

Gene ZC3HC1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-210ENST00000483827 EFCAB2Q5VUJ9 269 aa23.75■■□□□ 1.39
ZC3HC1-210ENST00000483827 CDC42BPBQ9Y5S2 1711 aa23.75■■□□□ 1.39
ZC3HC1-210ENST00000483827 SCAPERQ9BY12 1400 aa23.75■■□□□ 1.39
ZC3HC1-210ENST00000483827 PREX2Q70Z35 1606 aa23.71■■□□□ 1.39
ZC3HC1-210ENST00000483827 ARHGEF40Q8TER5 1519 aa23.7■■□□□ 1.38
ZC3HC1-210ENST00000483827 POGZQ7Z3K3 1410 aa23.7■■□□□ 1.38
ZC3HC1-210ENST00000483827 CDC42BPAQ5VT25 1732 aa23.7■■□□□ 1.38
ZC3HC1-210ENST00000483827 ZMYM4Q5VZL5 1548 aa23.69■■□□□ 1.38
ZC3HC1-210ENST00000483827 YEATS2Q9ULM3 1422 aa23.66■■□□□ 1.38
ZC3HC1-210ENST00000483827 ZFYVE16Q7Z3T8 1539 aa23.65■■□□□ 1.38
ZC3HC1-210ENST00000483827 MTUS2Q5JR59 1369 aa23.65■■□□□ 1.38
ZC3HC1-210ENST00000483827 ARID4BQ4LE39 1312 aaPredicted RBP23.62■■□□□ 1.37
ZC3HC1-210ENST00000483827 MAGI2Q86UL8 1455 aa23.62■■□□□ 1.37
ZC3HC1-210ENST00000483827 GPATCH8Q9UKJ3 1502 aaKnown RBP23.61■■□□□ 1.37
ZC3HC1-210ENST00000483827 SIGLEC1Q9BZZ2 1709 aa23.61■■□□□ 1.37
ZC3HC1-210ENST00000483827 ABCC1P33527 1531 aa23.6■■□□□ 1.37
ZC3HC1-210ENST00000483827 ARHGEF12Q9NZN5 1544 aa23.6■■□□□ 1.37
ZC3HC1-210ENST00000483827 AFAP1Q8N556 730 aa23.6■■□□□ 1.37
ZC3HC1-210ENST00000483827 ZNF518AQ6AHZ1 1483 aa23.6■■□□□ 1.37
ZC3HC1-210ENST00000483827 VPS8Q8N3P4 1428 aa23.59■■□□□ 1.37
ZC3HC1-210ENST00000483827 BCORL1Q5H9F3 1711 aa23.59■■□□□ 1.37
ZC3HC1-210ENST00000483827 FOXD1Q16676 465 aa23.59■■□□□ 1.37
ZC3HC1-210ENST00000483827 ADAMTSL3P82987 1691 aa23.59■■□□□ 1.37
ZC3HC1-210ENST00000483827 EHBP1L1Q8N3D4 1523 aa23.59■■□□□ 1.37
ZC3HC1-210ENST00000483827 ITSN2Q9NZM3 1697 aa23.57■■□□□ 1.36
ZC3HC1-210ENST00000483827 KDM5CP41229 1560 aa23.57■■□□□ 1.36
ZC3HC1-210ENST00000483827 ZNF777Q9ULD5 760 aaPredicted RBP23.57■■□□□ 1.36
ZC3HC1-210ENST00000483827 CCNB3Q8WWL7 1395 aa23.56■■□□□ 1.36
ZC3HC1-210ENST00000483827 TRAPPC8Q9Y2L5 1435 aa23.56■■□□□ 1.36
ZC3HC1-210ENST00000483827 SAMD9LQ8IVG5 1584 aa23.56■■□□□ 1.36
ZC3HC1-210ENST00000483827 TIAM1Q13009 1591 aa23.54■■□□□ 1.36
ZC3HC1-210ENST00000483827 MADDQ8WXG6 1647 aa23.53■■□□□ 1.36
ZC3HC1-210ENST00000483827 HECW2Q9P2P5 1572 aa23.52■■□□□ 1.36
ZC3HC1-210ENST00000483827 CFDP1Q9UEE9 299 aaPredicted RBP23.52■■□□□ 1.36
ZC3HC1-210ENST00000483827 ATP10AO60312 1499 aa23.51■■□□□ 1.35
ZC3HC1-210ENST00000483827 SYCP2Q9BX26 1530 aa23.5■■□□□ 1.35
ZC3HC1-210ENST00000483827 MYT1LQ9UL68 1186 aa23.5■■□□□ 1.35
ZC3HC1-210ENST00000483827 C9orf84Q5VXU9 1444 aa23.49■■□□□ 1.35
ZC3HC1-210ENST00000483827 HNRNPMP52272 730 aaKnown RBP eCLIP23.48■■□□□ 1.35
ZC3HC1-210ENST00000483827 PTPRMP28827 1452 aa23.48■■□□□ 1.35
ZC3HC1-210ENST00000483827 MLH3Q9UHC1 1453 aa23.48■■□□□ 1.35
ZC3HC1-210ENST00000483827 DIP2CQ9Y2E4 1556 aa23.48■■□□□ 1.35
ZC3HC1-210ENST00000483827 ABCA6Q8N139 1617 aa23.48■■□□□ 1.35
ZC3HC1-210ENST00000483827 SUPT6HQ7KZ85 1726 aaKnown RBP23.47■■□□□ 1.35
ZC3HC1-210ENST00000483827 MLECQ14165 292 aa23.47■■□□□ 1.35
ZC3HC1-210ENST00000483827 NCOA2Q15596 1464 aa23.46■■□□□ 1.35
ZC3HC1-210ENST00000483827 RIMS1Q86UR5 1692 aaKnown RBP23.45■■□□□ 1.34
ZC3HC1-210ENST00000483827 ZNF644Q9H582 1327 aaPredicted RBP23.45■■□□□ 1.34
ZC3HC1-210ENST00000483827 KIDINS220Q9ULH0 1771 aa23.45■■□□□ 1.34
ZC3HC1-210ENST00000483827 LRRC9Q6ZRR7 1453 aa23.43■■□□□ 1.34
ZC3HC1-210ENST00000483827 KIAA1107Q9UPP5 1409 aa23.42■■□□□ 1.34
ZC3HC1-210ENST00000483827 KANK4Q5T7N3 995 aaPredicted RBP23.42■■□□□ 1.34
ZC3HC1-210ENST00000483827 PLEKHH2Q8IVE3 1493 aa23.42■■□□□ 1.34
ZC3HC1-210ENST00000483827 MAP3K1Q13233 1512 aa23.39■■□□□ 1.34
ZC3HC1-210ENST00000483827 FER1L4A9Z1Z3 1794 aa23.39■■□□□ 1.33
ZC3HC1-210ENST00000483827 REREQ9P2R6 1566 aa23.38■■□□□ 1.33
ZC3HC1-210ENST00000483827 SPAG9O60271 1321 aaKnown RBP23.37■■□□□ 1.33
ZC3HC1-210ENST00000483827 PLPPR3Q6T4P5 718 aa23.35■■□□□ 1.33
ZC3HC1-210ENST00000483827 MBD5Q9P267 1494 aa23.35■■□□□ 1.33
ZC3HC1-210ENST00000483827 ATP7AQ04656 1500 aa23.34■■□□□ 1.33
ZC3HC1-210ENST00000483827 INO80Q9ULG1 1556 aaPredicted RBP23.34■■□□□ 1.33
ZC3HC1-210ENST00000483827 CAMSAP2Q08AD1 1489 aa23.32■■□□□ 1.32
ZC3HC1-210ENST00000483827 AGLP35573 1532 aa23.31■■□□□ 1.32
ZC3HC1-210ENST00000483827 APLP2Q06481 763 aa23.28■■□□□ 1.32
ZC3HC1-210ENST00000483827 CCDC141Q6ZP82 1450 aa23.24■■□□□ 1.31
ZC3HC1-210ENST00000483827 MYOM3Q5VTT5 1437 aa23.24■■□□□ 1.31
ZC3HC1-210ENST00000483827 A2MP01023 1474 aa23.24■■□□□ 1.31
ZC3HC1-210ENST00000483827 PLXNC1O60486 1568 aa23.23■■□□□ 1.31
ZC3HC1-210ENST00000483827 CEBPAP49715 358 aaPredicted RBP23.23■■□□□ 1.31
ZC3HC1-210ENST00000483827 ADGBQ8N7X0 1667 aa23.22■■□□□ 1.31
ZC3HC1-210ENST00000483827 RTEL1-TNFRSF6BF6WH68 1400 aa23.21■■□□□ 1.31
ZC3HC1-210ENST00000483827 LMTK3Q96Q04 1460 aa23.21■■□□□ 1.31
ZC3HC1-210ENST00000483827 ARHGEF5Q12774 1597 aa23.2■■□□□ 1.3
ZC3HC1-210ENST00000483827 MIA2Q96PC5 1412 aa23.17■■□□□ 1.3
ZC3HC1-210ENST00000483827 RSPH4AQ5TD94 716 aa23.17■■□□□ 1.3
ZC3HC1-210ENST00000483827 C3P01024 1663 aa23.16■■□□□ 1.3
ZC3HC1-210ENST00000483827 ESF1Q9H501 851 aaKnown RBP23.16■■□□□ 1.3
ZC3HC1-210ENST00000483827 DHX29Q7Z478 1369 aaKnown RBP23.13■■□□□ 1.29
ZC3HC1-210ENST00000483827 TSPY4P0CV99 314 aa23.12■■□□□ 1.29
ZC3HC1-210ENST00000483827 TSPY10P0CW01 314 aa23.12■■□□□ 1.29
ZC3HC1-210ENST00000483827 HSPA2P54652 639 aa23.12■■□□□ 1.29
ZC3HC1-210ENST00000483827 GGT6Q6P531 493 aa23.12■■□□□ 1.29
ZC3HC1-210ENST00000483827 PTPN23Q9H3S7 1636 aa23.11■■□□□ 1.29
ZC3HC1-210ENST00000483827 CLTCQ00610 1675 aaKnown RBP23.1■■□□□ 1.29
ZC3HC1-210ENST00000483827 PREX1Q8TCU6 1659 aa23.1■■□□□ 1.29
ZC3HC1-210ENST00000483827 CNTLNQ9NXG0 1405 aa23.1■■□□□ 1.29
ZC3HC1-210ENST00000483827 MAST1Q9Y2H9 1570 aa23.09■■□□□ 1.29
ZC3HC1-210ENST00000483827 MROH2AA6NES4 1674 aa23.08■■□□□ 1.29
ZC3HC1-210ENST00000483827 SETD1BQ9UPS6 1966 aaKnown RBP23.08■■□□□ 1.29
ZC3HC1-210ENST00000483827 FGD6Q6ZV73 1430 aa23.08■■□□□ 1.28
ZC3HC1-210ENST00000483827 ZMYM3Q14202 1370 aa23.05■■□□□ 1.28
ZC3HC1-210ENST00000483827 KIF3BO15066 747 aa23.05■■□□□ 1.28
ZC3HC1-210ENST00000483827 TCOF1Q13428 1488 aaKnown RBP23.03■■□□□ 1.28
ZC3HC1-210ENST00000483827 CROCC2H7BZ55 1655 aa23.03■■□□□ 1.28
ZC3HC1-210ENST00000483827 ABCC5O15440 1437 aa23.02■■□□□ 1.28
ZC3HC1-210ENST00000483827 UHRF1BP1Q6BDS2 1440 aa23.01■■□□□ 1.27
ZC3HC1-210ENST00000483827 DNMT1P26358 1616 aaKnown RBP23■■□□□ 1.27
ZC3HC1-210ENST00000483827 PPP6R1Q9UPN7 881 aa22.99■■□□□ 1.27
ZC3HC1-210ENST00000483827 DAPK1P53355 1430 aa22.99■■□□□ 1.27
ZC3HC1-210ENST00000483827 SHANK2Q9UPX8 1470 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms