RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 ZNF644Q9H582 1327 aaPredicted RBP19.86■□□□□ 0.77
RXRB-205ENST00000483821 RIMBP3CA6NJZ7 1639 aa19.86■□□□□ 0.77
RXRB-205ENST00000483821 RIMBP3BA6NNM3 1639 aa19.86■□□□□ 0.77
RXRB-205ENST00000483821 RIMBP3Q9UFD9 1639 aa19.86■□□□□ 0.77
RXRB-205ENST00000483821 HFM1A2PYH4 1435 aa19.85■□□□□ 0.77
RXRB-205ENST00000483821 DAPK1P53355 1430 aa19.85■□□□□ 0.77
RXRB-205ENST00000483821 RAB3GAP2Q9H2M9 1393 aa19.85■□□□□ 0.77
RXRB-205ENST00000483821 EFCAB2Q5VUJ9 269 aa19.85■□□□□ 0.77
RXRB-205ENST00000483821 PLEKHH2Q8IVE3 1493 aa19.85■□□□□ 0.77
RXRB-205ENST00000483821 PLCH2O75038 1416 aa19.85■□□□□ 0.77
RXRB-205ENST00000483821 PTPRKQ15262 1439 aa19.85■□□□□ 0.77
RXRB-205ENST00000483821 ROCK1Q13464 1354 aa19.84■□□□□ 0.77
RXRB-205ENST00000483821 PREX2Q70Z35 1606 aa19.84■□□□□ 0.77
RXRB-205ENST00000483821 CLSPNQ9HAW4 1339 aa19.84■□□□□ 0.77
RXRB-205ENST00000483821 ABCC5O15440 1437 aa19.84■□□□□ 0.77
RXRB-205ENST00000483821 DNMT1P26358 1616 aaKnown RBP19.84■□□□□ 0.77
RXRB-205ENST00000483821 ARHGAP5Q13017 1502 aa19.82■□□□□ 0.76
RXRB-205ENST00000483821 TTC37Q6PGP7 1564 aa19.82■□□□□ 0.76
RXRB-205ENST00000483821 ARAP3Q8WWN8 1544 aa19.81■□□□□ 0.76
RXRB-205ENST00000483821 TSPY4P0CV99 314 aa19.81■□□□□ 0.76
RXRB-205ENST00000483821 TSPY10P0CW01 314 aa19.81■□□□□ 0.76
RXRB-205ENST00000483821 MYO5CQ9NQX4 1742 aa19.8■□□□□ 0.76
RXRB-205ENST00000483821 CHIC2Q9UKJ5 165 aa19.8■□□□□ 0.76
RXRB-205ENST00000483821 KIAA1107Q9UPP5 1409 aa19.79■□□□□ 0.76
RXRB-205ENST00000483821 NAIPQ13075 1403 aa19.78■□□□□ 0.76
RXRB-205ENST00000483821 ARHGEF5Q12774 1597 aa19.77■□□□□ 0.76
RXRB-205ENST00000483821 CDC42BPBQ9Y5S2 1711 aa19.76■□□□□ 0.75
RXRB-205ENST00000483821 SHANK2Q9UPX8 1470 aa19.76■□□□□ 0.75
RXRB-205ENST00000483821 ANKRD30AQ9BXX3 1397 aa19.76■□□□□ 0.75
RXRB-205ENST00000483821 RRP7BPQ9NSQ0 103 aa19.76■□□□□ 0.75
RXRB-205ENST00000483821 ABCA9Q8IUA7 1624 aa19.76■□□□□ 0.75
RXRB-205ENST00000483821 DHX57Q6P158 1386 aaKnown RBP19.75■□□□□ 0.75
RXRB-205ENST00000483821 HNRNPMP52272 730 aaKnown RBP eCLIP19.74■□□□□ 0.75
RXRB-205ENST00000483821 MAPKBP1O60336 1514 aa19.74■□□□□ 0.75
RXRB-205ENST00000483821 SAMD9LQ8IVG5 1584 aa19.73■□□□□ 0.75
RXRB-205ENST00000483821 ADGRL2O95490 1459 aa19.73■□□□□ 0.75
RXRB-205ENST00000483821 CCDC141Q6ZP82 1450 aa19.73■□□□□ 0.75
RXRB-205ENST00000483821 MBD5Q9P267 1494 aa19.73■□□□□ 0.75
RXRB-205ENST00000483821 NCOA1Q15788 1441 aa19.7■□□□□ 0.74
RXRB-205ENST00000483821 C9orf84Q5VXU9 1444 aa19.7■□□□□ 0.74
RXRB-205ENST00000483821 GCC2Q8IWJ2 1684 aa19.69■□□□□ 0.74
RXRB-205ENST00000483821 CROCC2H7BZ55 1655 aa19.68■□□□□ 0.74
RXRB-205ENST00000483821 CD109Q6YHK3 1445 aa19.68■□□□□ 0.74
RXRB-205ENST00000483821 ADGBQ8N7X0 1667 aa19.67■□□□□ 0.74
RXRB-205ENST00000483821 FANCAO15360 1455 aa19.67■□□□□ 0.74
RXRB-205ENST00000483821 SYCP2Q9BX26 1530 aa19.66■□□□□ 0.74
RXRB-205ENST00000483821 ABCC1P33527 1531 aa19.63■□□□□ 0.73
RXRB-205ENST00000483821 TRIM52Q96A61 297 aa19.63■□□□□ 0.73
RXRB-205ENST00000483821 MAST1Q9Y2H9 1570 aa19.62■□□□□ 0.73
RXRB-205ENST00000483821 CFAP74Q9C0B2 1584 aa19.61■□□□□ 0.73
RXRB-205ENST00000483821 GLI2P10070 1586 aa19.61■□□□□ 0.73
RXRB-205ENST00000483821 ANKRD50Q9ULJ7 1429 aa19.59■□□□□ 0.73
RXRB-205ENST00000483821 KIF15Q9NS87 1388 aa19.59■□□□□ 0.73
RXRB-205ENST00000483821 ADGRL1O94910 1474 aa19.59■□□□□ 0.73
RXRB-205ENST00000483821 RTEL1-TNFRSF6BF6WH68 1400 aa19.59■□□□□ 0.73
RXRB-205ENST00000483821 SPAG9O60271 1321 aaKnown RBP19.58■□□□□ 0.73
RXRB-205ENST00000483821 ARHGEF12Q9NZN5 1544 aa19.58■□□□□ 0.73
RXRB-205ENST00000483821 NEO1Q92859 1461 aa19.57■□□□□ 0.72
RXRB-205ENST00000483821 SCAPERQ9BY12 1400 aa19.57■□□□□ 0.72
RXRB-205ENST00000483821 FAM69CQ0P6D2 419 aa19.55■□□□□ 0.72
RXRB-205ENST00000483821 TRAPPC8Q9Y2L5 1435 aa19.55■□□□□ 0.72
RXRB-205ENST00000483821 MPHOSPH9Q99550 1183 aa19.53■□□□□ 0.72
RXRB-205ENST00000483821 TIMELESSQ9UNS1 1208 aa19.53■□□□□ 0.72
RXRB-205ENST00000483821 PLXNC1O60486 1568 aa19.53■□□□□ 0.72
RXRB-205ENST00000483821 AFAP1Q8N556 730 aa19.52■□□□□ 0.72
RXRB-205ENST00000483821 KDM6BO15054 1643 aa19.51■□□□□ 0.71
RXRB-205ENST00000483821 DUOX2Q9NRD8 1548 aa19.51■□□□□ 0.71
RXRB-205ENST00000483821 ZNF518AQ6AHZ1 1483 aa19.5■□□□□ 0.71
RXRB-205ENST00000483821 MAP3K4Q9Y6R4 1608 aa19.5■□□□□ 0.71
RXRB-205ENST00000483821 SLC4A1APQ9BWU0 796 aaKnown RBP19.49■□□□□ 0.71
RXRB-205ENST00000483821 MYT1LQ9UL68 1186 aa19.49■□□□□ 0.71
RXRB-205ENST00000483821 DIP2BQ9P265 1576 aa19.48■□□□□ 0.71
RXRB-205ENST00000483821 ERBINQ96RT1 1412 aa19.47■□□□□ 0.71
RXRB-205ENST00000483821 TEX14Q8IWB6 1497 aa19.47■□□□□ 0.71
RXRB-205ENST00000483821 POGZQ7Z3K3 1410 aa19.45■□□□□ 0.7
RXRB-205ENST00000483821 DENND4BO75064 1496 aaPredicted RBP19.45■□□□□ 0.7
RXRB-205ENST00000483821 NUP155O75694 1391 aa19.44■□□□□ 0.7
RXRB-205ENST00000483821 ATP7AQ04656 1500 aa19.44■□□□□ 0.7
RXRB-205ENST00000483821 ZFYVE16Q7Z3T8 1539 aa19.43■□□□□ 0.7
RXRB-205ENST00000483821 INO80Q9ULG1 1556 aaPredicted RBP19.41■□□□□ 0.7
RXRB-205ENST00000483821 NEUROD1Q13562 356 aa19.41■□□□□ 0.7
RXRB-205ENST00000483821 MLH3Q9UHC1 1453 aa19.41■□□□□ 0.7
RXRB-205ENST00000483821 KDM5DQ9BY66 1539 aa19.41■□□□□ 0.7
RXRB-205ENST00000483821 PZPP20742 1482 aa19.4■□□□□ 0.7
RXRB-205ENST00000483821 SIN3AQ96ST3 1273 aa19.39■□□□□ 0.69
RXRB-205ENST00000483821 DHX29Q7Z478 1369 aaKnown RBP19.39■□□□□ 0.69
RXRB-205ENST00000483821 KDM5CP41229 1560 aa19.38■□□□□ 0.69
RXRB-205ENST00000483821 PKD2Q13563 968 aa19.37■□□□□ 0.69
RXRB-205ENST00000483821 DNAJC5Q9H3Z4 198 aa19.37■□□□□ 0.69
RXRB-205ENST00000483821 TONSLQ96HA7 1378 aa19.35■□□□□ 0.69
RXRB-205ENST00000483821 ANKRD30BQ9BXX2 1392 aa19.35■□□□□ 0.69
RXRB-205ENST00000483821 UNC13BO14795 1591 aa19.35■□□□□ 0.69
RXRB-205ENST00000483821 KANK1Q14678 1352 aa19.33■□□□□ 0.69
RXRB-205ENST00000483821 HECW2Q9P2P5 1572 aa19.33■□□□□ 0.69
RXRB-205ENST00000483821 RAPGEF3O95398 923 aa19.33■□□□□ 0.68
RXRB-205ENST00000483821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.33■□□□□ 0.683e-12■■□□□ 11.9
RXRB-205ENST00000483821 A2MP01023 1474 aa19.31■□□□□ 0.68
RXRB-205ENST00000483821 KIDINS220Q9ULH0 1771 aa19.31■□□□□ 0.68
RXRB-205ENST00000483821 FAM135AQ9P2D6 1515 aa19.3■□□□□ 0.68
RXRB-205ENST00000483821 MAGI2Q86UL8 1455 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms