RNA–Protein interactions for RNA: ENST00000483643.7

NAP1L4-208, Transcript of nucleosome assembly protein 1 like 4, human

TSL 2

Gene NAP1L4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NAP1L4-208	ENST00000483643	BMP2K	Q9NSY1	1161 aa	Predicted RBP	9.29	□□□□□ -0.92
NAP1L4-208	ENST00000483643	MAP3K13	O43283	966 aa		9.28	□□□□□ -0.92
NAP1L4-208	ENST00000483643	PCDHB8	Q9UN66	801 aa		9.28	□□□□□ -0.92
NAP1L4-208	ENST00000483643	PCDHB13	Q9Y5F0	798 aa		9.28	□□□□□ -0.92
NAP1L4-208	ENST00000483643	SEC24B	O95487	1268 aa		9.27	□□□□□ -0.93
NAP1L4-208	ENST00000483643	PDAP1	Q13442	181 aa	Known RBP	9.27	□□□□□ -0.93
NAP1L4-208	ENST00000483643	P3H3	Q8IVL6	736 aa		9.27	□□□□□ -0.93
NAP1L4-208	ENST00000483643	DIEXF	Q68CQ4	756 aa	Known RBP	9.25	□□□□□ -0.93
NAP1L4-208	ENST00000483643	PSEN1	P49768	467 aa		9.23	□□□□□ -0.93
NAP1L4-208	ENST00000483643	NEFL	P07196	543 aa		9.22	□□□□□ -0.93
NAP1L4-208	ENST00000483643	SALL2	Q9Y467	1007 aa	Predicted RBP	9.22	□□□□□ -0.93
NAP1L4-208	ENST00000483643	CADPS2	Q86UW7	1296 aa		9.21	□□□□□ -0.94
NAP1L4-208	ENST00000483643	IFNL1	Q8IU54	200 aa		9.21	□□□□□ -0.94
NAP1L4-208	ENST00000483643	TRPC6	Q9Y210	931 aa		9.21	□□□□□ -0.94
NAP1L4-208	ENST00000483643	TTLL13P	A6NNM8	815 aa		9.2	□□□□□ -0.94
NAP1L4-208	ENST00000483643	POTEF	A5A3E0	1075 aa		9.19	□□□□□ -0.94
NAP1L4-208	ENST00000483643	RANGAP1	P46060	587 aa	Predicted RBP	9.19	□□□□□ -0.94
NAP1L4-208	ENST00000483643	MFRP	Q9BY79	579 aa		9.19	□□□□□ -0.94
NAP1L4-208	ENST00000483643	IER5L	Q5T953	404 aa		9.18	□□□□□ -0.94
NAP1L4-208	ENST00000483643	ARX	Q96QS3	562 aa		9.18	□□□□□ -0.94
NAP1L4-208	ENST00000483643	KCNV2	Q8TDN2	545 aa		9.17	□□□□□ -0.94
NAP1L4-208	ENST00000483643	TRIM35	Q9UPQ4	493 aa		9.16	□□□□□ -0.94
NAP1L4-208	ENST00000483643	SUPT16H	Q9Y5B9	1047 aa	Known RBP	9.16	□□□□□ -0.94
NAP1L4-208	ENST00000483643	LCE2D	Q5TA82	110 aa	Predicted RBP	9.15	□□□□□ -0.94
NAP1L4-208	ENST00000483643	COLQ	Q9Y215	455 aa	Predicted RBP	9.15	□□□□□ -0.94
NAP1L4-208	ENST00000483643	FBXO22	Q8NEZ5	403 aa		9.13	□□□□□ -0.95
NAP1L4-208	ENST00000483643	CABP2	Q9NPB3	220 aa		9.13	□□□□□ -0.95
NAP1L4-208	ENST00000483643	DEK	P35659	375 aa	Known RBP	9.12	□□□□□ -0.95
NAP1L4-208	ENST00000483643	WDR70	Q9NW82	654 aa		9.12	□□□□□ -0.95
NAP1L4-208	ENST00000483643	SOX12	O15370	315 aa		9.1	□□□□□ -0.95
NAP1L4-208	ENST00000483643	PLCG2	P16885	1265 aa		9.09	□□□□□ -0.95
NAP1L4-208	ENST00000483643	GOLGA2	Q08379	1002 aa		9.09	□□□□□ -0.95
NAP1L4-208	ENST00000483643	EFCAB3	Q8N7B9	438 aa		9.09	□□□□□ -0.95
NAP1L4-208	ENST00000483643	SLAIN1	Q8ND83	568 aa		9.09	□□□□□ -0.95
NAP1L4-208	ENST00000483643	TMEM106C	Q9BVX2	250 aa		9.09	□□□□□ -0.95
NAP1L4-208	ENST00000483643	NLRP6	P59044	892 aa		9.08	□□□□□ -0.96
NAP1L4-208	ENST00000483643	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	9.08	□□□□□ -0.96
NAP1L4-208	ENST00000483643	CDAN1	Q8IWY9	1227 aa		9.08	□□□□□ -0.96
NAP1L4-208	ENST00000483643	FANCI	Q9NVI1	1328 aa		9.07	□□□□□ -0.96
NAP1L4-208	ENST00000483643	PPP1R37	O75864	691 aa		9.07	□□□□□ -0.96
NAP1L4-208	ENST00000483643	ARHGEF1	Q92888	912 aa	Known RBP	9.07	□□□□□ -0.96
NAP1L4-208	ENST00000483643	GLIPR1L2	Q4G1C9	344 aa		9.06	□□□□□ -0.96
NAP1L4-208	ENST00000483643	LMOD2	Q6P5Q4	547 aa		9.06	□□□□□ -0.96
NAP1L4-208	ENST00000483643	CCDC136	Q96JN2	1154 aa		9.06	□□□□□ -0.96
NAP1L4-208	ENST00000483643	PDIA4	P13667	645 aa	Known RBP	9.05	□□□□□ -0.96
NAP1L4-208	ENST00000483643	PDE4C	Q08493	712 aa		9.05	□□□□□ -0.96
NAP1L4-208	ENST00000483643	PHF8	Q9UPP1	1060 aa		9.04	□□□□□ -0.96
NAP1L4-208	ENST00000483643	RBM19	Q9Y4C8	960 aa	Known RBP	9.04	□□□□□ -0.96
NAP1L4-208	ENST00000483643	TMEM132A	Q24JP5	1023 aa		9.02	□□□□□ -0.97
NAP1L4-208	ENST00000483643	ST18	O60284	1047 aa		9.01	□□□□□ -0.97
NAP1L4-208	ENST00000483643	MKRN3	Q13064	507 aa	Known RBP	9.01	□□□□□ -0.97
NAP1L4-208	ENST00000483643	E2F4	Q16254	413 aa		9.01	□□□□□ -0.97
NAP1L4-208	ENST00000483643	MFSD10	Q14728	455 aa		9	□□□□□ -0.97
NAP1L4-208	ENST00000483643	OCEL1	Q9H607	264 aa		9	□□□□□ -0.97
NAP1L4-208	ENST00000483643	ARIH1	Q9Y4X5	557 aa	Predicted RBP	9	□□□□□ -0.97
NAP1L4-208	ENST00000483643	TESPA1	A2RU30	521 aa	Predicted RBP	8.99	□□□□□ -0.97
NAP1L4-208	ENST00000483643	SNPH	O15079	494 aa		8.99	□□□□□ -0.97
NAP1L4-208	ENST00000483643	FGD1	P98174	961 aa		8.99	□□□□□ -0.97
NAP1L4-208	ENST00000483643	MS4A4A	Q96JQ5	239 aa		8.99	□□□□□ -0.97
NAP1L4-208	ENST00000483643	NCKAP5L	Q9HCH0	1330 aa		8.99	□□□□□ -0.97
NAP1L4-208	ENST00000483643	ZNF316	A6NFI3	1004 aa	Predicted RBP	8.98	□□□□□ -0.97
NAP1L4-208	ENST00000483643	IRX5	P78411	483 aa	Predicted RBP	8.98	□□□□□ -0.97
NAP1L4-208	ENST00000483643	TULP1	O00294	542 aa	Predicted RBP	8.97	□□□□□ -0.97
NAP1L4-208	ENST00000483643	CRISPLD2	Q9H0B8	497 aa		8.97	□□□□□ -0.97
NAP1L4-208	ENST00000483643	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	8.97	□□□□□ -0.97
NAP1L4-208	ENST00000483643	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	8.95	□□□□□ -0.98
NAP1L4-208	ENST00000483643	TIMELESS	Q9UNS1	1208 aa		8.95	□□□□□ -0.98
NAP1L4-208	ENST00000483643	PDE4A	P27815	886 aa		8.93	□□□□□ -0.98
NAP1L4-208	ENST00000483643	CAMK2B	Q13554	666 aa		8.93	□□□□□ -0.98
NAP1L4-208	ENST00000483643	TAF7L	Q5H9L4	462 aa		8.93	□□□□□ -0.98
NAP1L4-208	ENST00000483643	CCER1	Q8TC90	406 aa	Predicted RBP	8.93	□□□□□ -0.98
NAP1L4-208	ENST00000483643	ZC3H15	Q8WU90	426 aa	Known RBP	8.93	□□□□□ -0.98
NAP1L4-208	ENST00000483643	YTHDC1	Q96MU7	727 aa	Known RBP	8.93	□□□□□ -0.98
NAP1L4-208	ENST00000483643	SEMA3E	O15041	775 aa		8.92	□□□□□ -0.98
NAP1L4-208	ENST00000483643	AAMP	Q13685	434 aa		8.92	□□□□□ -0.98
NAP1L4-208	ENST00000483643	ILDR1	Q86SU0	546 aa	Predicted RBP	8.92	□□□□□ -0.98
NAP1L4-208	ENST00000483643	ZMYND15	Q9H091	742 aa		8.92	□□□□□ -0.98
NAP1L4-208	ENST00000483643	C11orf95	C9JLR9	678 aa	Predicted RBP	8.9	□□□□□ -0.98
NAP1L4-208	ENST00000483643	BRPF1	P55201	1214 aa	Predicted RBP	8.9	□□□□□ -0.98
NAP1L4-208	ENST00000483643	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	8.9	□□□□□ -0.98	2e-12	■■□□□ 12.1
NAP1L4-208	ENST00000483643	DDX27	Q96GQ7	796 aa	Known RBP	8.89	□□□□□ -0.99
NAP1L4-208	ENST00000483643	LARP6	Q9BRS8	491 aa	Known RBP	8.89	□□□□□ -0.99
NAP1L4-208	ENST00000483643	RSPH6A	Q9H0K4	717 aa		8.89	□□□□□ -0.99
NAP1L4-208	ENST00000483643	L3MBTL3	Q96JM7	780 aa	Predicted RBP	8.88	□□□□□ -0.99
NAP1L4-208	ENST00000483643	C3orf67	Q6ZVT6	689 aa		8.87	□□□□□ -0.99
NAP1L4-208	ENST00000483643	ZMYND10	O75800	440 aa		8.85	□□□□□ -0.99
NAP1L4-208	ENST00000483643	SMYD5	Q6GMV2	418 aa		8.85	□□□□□ -0.99
NAP1L4-208	ENST00000483643	RBM10	P98175	930 aa	Known RBP	8.84	□□□□□ -0.99
NAP1L4-208	ENST00000483643	MMRN1	Q13201	1228 aa		8.84	□□□□□ -0.99
NAP1L4-208	ENST00000483643	SPNS2	Q8IVW8	549 aa		8.84	□□□□□ -0.99
NAP1L4-208	ENST00000483643	IL27	Q8NEV9	243 aa		8.83	□□□□□ -1
NAP1L4-208	ENST00000483643	MARVELD3	Q96A59	401 aa		8.83	□□□□□ -1
NAP1L4-208	ENST00000483643	HOMEZ	Q8IX15	550 aa		8.82	□□□□□ -1
NAP1L4-208	ENST00000483643	ZNF326	Q5BKZ1	582 aa	Known RBP	8.81	□□□□□ -1
NAP1L4-208	ENST00000483643	SLC24A3	Q9HC58	644 aa		8.8	□□□□□ -1
NAP1L4-208	ENST00000483643	GPHN	Q9NQX3	736 aa	Predicted RBP	8.8	□□□□□ -1
NAP1L4-208	ENST00000483643		G3V3G9	751 aa		8.79	□□□□□ -1
NAP1L4-208	ENST00000483643	EMP3	P54852	163 aa		8.79	□□□□□ -1
NAP1L4-208	ENST00000483643	DPY19L2	Q6NUT2	758 aa		8.79	□□□□□ -1
NAP1L4-208	ENST00000483643	BARGIN	Q6ZT62	677 aa		8.79	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms