RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 FGD6Q6ZV73 1430 aa31.78■■■□□ 2.68
RXRB-204ENST00000483281 EFCAB2Q5VUJ9 269 aa31.76■■■□□ 2.67
RXRB-204ENST00000483281 RRBP1Q9P2E9 1410 aaKnown RBP31.75■■■□□ 2.67
RXRB-204ENST00000483281 ARHGAP5Q13017 1502 aa31.73■■■□□ 2.67
RXRB-204ENST00000483281 TRHP20396 242 aaPredicted RBP31.7■■■□□ 2.67
RXRB-204ENST00000483281 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.7■■■□□ 2.66
RXRB-204ENST00000483281 PTPN23Q9H3S7 1636 aa31.69■■■□□ 2.66
RXRB-204ENST00000483281 TCOF1Q13428 1488 aaKnown RBP31.69■■■□□ 2.66
RXRB-204ENST00000483281 FANCAO15360 1455 aa31.68■■■□□ 2.66
RXRB-204ENST00000483281 PPRC1Q5VV67 1664 aaKnown RBP31.68■■■□□ 2.66
RXRB-204ENST00000483281 CFAP74Q9C0B2 1584 aa31.67■■■□□ 2.66
RXRB-204ENST00000483281 TSPOAP1O95153 1857 aa31.66■■■□□ 2.66
RXRB-204ENST00000483281 NEO1Q92859 1461 aa31.66■■■□□ 2.66
RXRB-204ENST00000483281 TEX14Q8IWB6 1497 aa31.65■■■□□ 2.66
RXRB-204ENST00000483281 ZNF777Q9ULD5 760 aaPredicted RBP31.63■■■□□ 2.65
RXRB-204ENST00000483281 SAMD9LQ8IVG5 1584 aa31.63■■■□□ 2.65
RXRB-204ENST00000483281 PLEKHH2Q8IVE3 1493 aa31.62■■■□□ 2.65
RXRB-204ENST00000483281 ZNF644Q9H582 1327 aaPredicted RBP31.62■■■□□ 2.65
RXRB-204ENST00000483281 CAMSAP2Q08AD1 1489 aa31.62■■■□□ 2.65
RXRB-204ENST00000483281 AKNAQ7Z591 1439 aa31.61■■■□□ 2.65
RXRB-204ENST00000483281 KIAA1107Q9UPP5 1409 aa31.61■■■□□ 2.65
RXRB-204ENST00000483281 TRIM26Q12899 539 aaPredicted RBP31.58■■■□□ 2.65
RXRB-204ENST00000483281 FAM50AQ14320 339 aaKnown RBP31.57■■■□□ 2.65
RXRB-204ENST00000483281 RSPH4AQ5TD94 716 aa31.56■■■□□ 2.64
RXRB-204ENST00000483281 ABCC1P33527 1531 aa31.54■■■□□ 2.64
RXRB-204ENST00000483281 ADGRL1O94910 1474 aa31.52■■■□□ 2.64
RXRB-204ENST00000483281 MBD5Q9P267 1494 aa31.52■■■□□ 2.64
RXRB-204ENST00000483281 ARHGEF5Q12774 1597 aa31.51■■■□□ 2.63
RXRB-204ENST00000483281 HNRNPMP52272 730 aaKnown RBP eCLIP31.5■■■□□ 2.63
RXRB-204ENST00000483281 ARHGEF12Q9NZN5 1544 aa31.5■■■□□ 2.63
RXRB-204ENST00000483281 SCAPERQ9BY12 1400 aa31.49■■■□□ 2.63
RXRB-204ENST00000483281 SYCP2Q9BX26 1530 aa31.48■■■□□ 2.63
RXRB-204ENST00000483281 DNMT1P26358 1616 aaKnown RBP31.47■■■□□ 2.63
RXRB-204ENST00000483281 ABCC5O15440 1437 aa31.43■■■□□ 2.62
RXRB-204ENST00000483281 DAPK1P53355 1430 aa31.42■■■□□ 2.62
RXRB-204ENST00000483281 CCDC141Q6ZP82 1450 aa31.42■■■□□ 2.62
RXRB-204ENST00000483281 DENND4BO75064 1496 aaPredicted RBP31.41■■■□□ 2.62
RXRB-204ENST00000483281 TRAPPC8Q9Y2L5 1435 aa31.4■■■□□ 2.62
RXRB-204ENST00000483281 TSPY4P0CV99 314 aa31.37■■■□□ 2.61
RXRB-204ENST00000483281 TSPY10P0CW01 314 aa31.37■■■□□ 2.61
RXRB-204ENST00000483281 ZNF518AQ6AHZ1 1483 aa31.37■■■□□ 2.61
RXRB-204ENST00000483281 POGZQ7Z3K3 1410 aa31.37■■■□□ 2.61
RXRB-204ENST00000483281 CROCC2H7BZ55 1655 aa31.37■■■□□ 2.61
RXRB-204ENST00000483281 AFAP1Q8N556 730 aa31.36■■■□□ 2.61
RXRB-204ENST00000483281 RICTORQ6R327 1708 aa31.35■■■□□ 2.61
RXRB-204ENST00000483281 SHANK2Q9UPX8 1470 aa31.35■■■□□ 2.61
RXRB-204ENST00000483281 PTPRKQ15262 1439 aa31.34■■■□□ 2.61
RXRB-204ENST00000483281 MAST1Q9Y2H9 1570 aa31.32■■■□□ 2.61
RXRB-204ENST00000483281 ITGAEP38570 1179 aa31.32■■■□□ 2.6
RXRB-204ENST00000483281 KDM5CP41229 1560 aa31.32■■■□□ 2.6
RXRB-204ENST00000483281 COL17A1Q9UMD9 1497 aaPredicted RBP31.32■■■□□ 2.6
RXRB-204ENST00000483281 RAPGEF3O95398 923 aa31.3■■■□□ 2.6
RXRB-204ENST00000483281 RTEL1-TNFRSF6BF6WH68 1400 aa31.3■■■□□ 2.6
RXRB-204ENST00000483281 SPAG9O60271 1321 aaKnown RBP31.28■■■□□ 2.6
RXRB-204ENST00000483281 C9orf84Q5VXU9 1444 aa31.28■■■□□ 2.6
RXRB-204ENST00000483281 FRMPD1Q5SYB0 1578 aa31.27■■■□□ 2.6
RXRB-204ENST00000483281 MLH3Q9UHC1 1453 aa31.27■■■□□ 2.6
RXRB-204ENST00000483281 ROCK1Q13464 1354 aa31.27■■■□□ 2.6
RXRB-204ENST00000483281 ADGRL2O95490 1459 aa31.26■■■□□ 2.59
RXRB-204ENST00000483281 ZMYM4Q5VZL5 1548 aa31.24■■■□□ 2.59
RXRB-204ENST00000483281 ADGBQ8N7X0 1667 aa31.24■■■□□ 2.59
RXRB-204ENST00000483281 CHIC2Q9UKJ5 165 aa31.23■■■□□ 2.59
RXRB-204ENST00000483281 KDM6BO15054 1643 aa31.23■■■□□ 2.59
RXRB-204ENST00000483281 INO80Q9ULG1 1556 aaPredicted RBP31.22■■■□□ 2.59
RXRB-204ENST00000483281 MAGI2Q86UL8 1455 aa31.22■■■□□ 2.59
RXRB-204ENST00000483281 NCOA1Q15788 1441 aa31.21■■■□□ 2.59
RXRB-204ENST00000483281 PCGF6Q9BYE7 350 aa31.21■■■□□ 2.59
RXRB-204ENST00000483281 ANKRD30AQ9BXX3 1397 aa31.21■■■□□ 2.59
RXRB-204ENST00000483281 HECW2Q9P2P5 1572 aa31.2■■■□□ 2.59
RXRB-204ENST00000483281 KIDINS220Q9ULH0 1771 aa31.2■■■□□ 2.58
RXRB-204ENST00000483281 ATP7AQ04656 1500 aa31.19■■■□□ 2.58
RXRB-204ENST00000483281 ZFYVE16Q7Z3T8 1539 aa31.19■■■□□ 2.58
RXRB-204ENST00000483281 PLXNC1O60486 1568 aa31.17■■■□□ 2.58
RXRB-204ENST00000483281 HFM1A2PYH4 1435 aa31.12■■■□□ 2.57
RXRB-204ENST00000483281 MYT1LQ9UL68 1186 aa31.12■■■□□ 2.57
RXRB-204ENST00000483281 RRP7BPQ9NSQ0 103 aa31.11■■■□□ 2.57
RXRB-204ENST00000483281 NAIPQ13075 1403 aa31.09■■■□□ 2.57
RXRB-204ENST00000483281 KIF15Q9NS87 1388 aa31.08■■■□□ 2.57
RXRB-204ENST00000483281 GCC2Q8IWJ2 1684 aa31.06■■■□□ 2.56
RXRB-204ENST00000483281 DUOX2Q9NRD8 1548 aa31.06■■■□□ 2.56
RXRB-204ENST00000483281 SETD5Q9C0A6 1442 aa31.05■■■□□ 2.56
RXRB-204ENST00000483281 YEATS2Q9ULM3 1422 aa31.05■■■□□ 2.56
RXRB-204ENST00000483281 ABCA6Q8N139 1617 aa31.04■■■□□ 2.56
RXRB-204ENST00000483281 DIP2CQ9Y2E4 1556 aa31.04■■■□□ 2.56
RXRB-204ENST00000483281 DHX29Q7Z478 1369 aaKnown RBP31.03■■■□□ 2.56
RXRB-204ENST00000483281 ATP10AO60312 1499 aa31.02■■■□□ 2.56
RXRB-204ENST00000483281 HRCP23327 699 aa31.01■■■□□ 2.56
RXRB-204ENST00000483281 A2MP01023 1474 aa30.99■■■□□ 2.55
RXRB-204ENST00000483281 ANKRD50Q9ULJ7 1429 aa30.99■■■□□ 2.55
RXRB-204ENST00000483281 ARHGEF40Q8TER5 1519 aa30.99■■■□□ 2.55
RXRB-204ENST00000483281 REREQ9P2R6 1566 aa30.98■■■□□ 2.55
RXRB-204ENST00000483281 ERBINQ96RT1 1412 aa30.98■■■□□ 2.55
RXRB-204ENST00000483281 ACIN1Q9UKV3 1341 aaKnown RBP30.97■■■□□ 2.55
RXRB-204ENST00000483281 RAB3GAP2Q9H2M9 1393 aa30.92■■■□□ 2.54
RXRB-204ENST00000483281 EIF2AK4Q9P2K8 1649 aaKnown RBP30.91■■■□□ 2.54
RXRB-204ENST00000483281 BCORL1Q5H9F3 1711 aa30.9■■■□□ 2.54
RXRB-204ENST00000483281 AGLP35573 1532 aa30.88■■■□□ 2.53
RXRB-204ENST00000483281 KIF3BO15066 747 aa30.83■■■□□ 2.53
RXRB-204ENST00000483281 DEPDC5O75140 1603 aa30.79■■■□□ 2.52
RXRB-204ENST00000483281 SIGLEC1Q9BZZ2 1709 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms