RNA–Protein interactions for RNA: ENST00000482841.6

ATP7B-208, Transcript of ATPase copper transporting beta, humanhuman

TSL 2

Gene ATP7B, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-208ENST00000482841 ABCA8O94911 1581 aa23.48■■□□□ 1.35
ATP7B-208ENST00000482841 PRG4Q92954 1404 aaPredicted RBP23.47■■□□□ 1.35
ATP7B-208ENST00000482841 GPATCH8Q9UKJ3 1502 aaKnown RBP23.44■■□□□ 1.34
ATP7B-208ENST00000482841 KIF14Q15058 1648 aa23.43■■□□□ 1.34
ATP7B-208ENST00000482841 CAMSAP2Q08AD1 1489 aa23.43■■□□□ 1.34
ATP7B-208ENST00000482841 ADGBQ8N7X0 1667 aa23.41■■□□□ 1.34
ATP7B-208ENST00000482841 FBLN2P98095 1184 aa23.41■■□□□ 1.34
ATP7B-208ENST00000482841 CROCC2H7BZ55 1655 aa23.4■■□□□ 1.34
ATP7B-208ENST00000482841 MPHOSPH9Q99550 1183 aa23.4■■□□□ 1.34
ATP7B-208ENST00000482841 ADGRL2O95490 1459 aa23.39■■□□□ 1.33
ATP7B-208ENST00000482841 ZNF644Q9H582 1327 aaPredicted RBP23.37■■□□□ 1.33
ATP7B-208ENST00000482841 TRIM52Q96A61 297 aa23.37■■□□□ 1.33
ATP7B-208ENST00000482841 PELP1Q8IZL8 1130 aaKnown RBP23.36■■□□□ 1.33
ATP7B-208ENST00000482841 DDX10Q13206 875 aaKnown RBP23.35■■□□□ 1.33
ATP7B-208ENST00000482841 ABCC10Q5T3U5 1492 aa23.34■■□□□ 1.33
ATP7B-208ENST00000482841 ATP10BO94823 1461 aa23.33■■□□□ 1.33
ATP7B-208ENST00000482841 CFDP1Q9UEE9 299 aaPredicted RBP23.33■■□□□ 1.33
ATP7B-208ENST00000482841 CDC42BPAQ5VT25 1732 aa23.33■■□□□ 1.33
ATP7B-208ENST00000482841 NCOA1Q15788 1441 aa23.32■■□□□ 1.32
ATP7B-208ENST00000482841 ANKRD30BQ9BXX2 1392 aa23.32■■□□□ 1.32
ATP7B-208ENST00000482841 RPRD2Q5VT52 1461 aaKnown RBP23.3■■□□□ 1.32
ATP7B-208ENST00000482841 SHANK2Q9UPX8 1470 aa23.29■■□□□ 1.32
ATP7B-208ENST00000482841 PLEKHD1A6NEE1 506 aa23.26■■□□□ 1.31
ATP7B-208ENST00000482841 SHROOM2Q13796 1616 aa23.26■■□□□ 1.31
ATP7B-208ENST00000482841 CHD1O14646 1710 aa23.26■■□□□ 1.31
ATP7B-208ENST00000482841 PZPP20742 1482 aa23.26■■□□□ 1.31
ATP7B-208ENST00000482841 CCER2I3L3R5 266 aa23.25■■□□□ 1.31
ATP7B-208ENST00000482841 TEX14Q8IWB6 1497 aa23.24■■□□□ 1.31
ATP7B-208ENST00000482841 HIRIP3Q9BW71 556 aaPredicted RBP23.23■■□□□ 1.31
ATP7B-208ENST00000482841 PTPRGP23470 1445 aa23.23■■□□□ 1.31
ATP7B-208ENST00000482841 ANKRD30AQ9BXX3 1397 aa23.22■■□□□ 1.31
ATP7B-208ENST00000482841 ARHGEF5Q12774 1597 aa23.2■■□□□ 1.31
ATP7B-208ENST00000482841 L3MBTL2Q969R5 705 aa23.19■■□□□ 1.3
ATP7B-208ENST00000482841 KCNH8Q96L42 1107 aa23.18■■□□□ 1.3
ATP7B-208ENST00000482841 SLC4A1APQ9BWU0 796 aaKnown RBP23.18■■□□□ 1.3
ATP7B-208ENST00000482841 ANP32CO43423 234 aa23.17■■□□□ 1.3
ATP7B-208ENST00000482841 FOXD1Q16676 465 aa23.15■■□□□ 1.3
ATP7B-208ENST00000482841 KDM5DQ9BY66 1539 aa23.15■■□□□ 1.3
ATP7B-208ENST00000482841 C9orf84Q5VXU9 1444 aa23.15■■□□□ 1.3
ATP7B-208ENST00000482841 ANKRD50Q9ULJ7 1429 aa23.15■■□□□ 1.3
ATP7B-208ENST00000482841 KIAA1107Q9UPP5 1409 aa23.15■■□□□ 1.3
ATP7B-208ENST00000482841 PREX2Q70Z35 1606 aa23.14■■□□□ 1.3
ATP7B-208ENST00000482841 ZNF777Q9ULD5 760 aaPredicted RBP23.14■■□□□ 1.29
ATP7B-208ENST00000482841 HSPA5P11021 654 aaKnown RBP23.13■■□□□ 1.29
ATP7B-208ENST00000482841 EIF4G2P78344 907 aaKnown RBP eCLIP23.13■■□□□ 1.29
ATP7B-208ENST00000482841 CDC42BPBQ9Y5S2 1711 aa23.11■■□□□ 1.29
ATP7B-208ENST00000482841 MBD5Q9P267 1494 aa23.11■■□□□ 1.29
ATP7B-208ENST00000482841 WASHC2AQ641Q2 1341 aa23.09■■□□□ 1.29
ATP7B-208ENST00000482841 SAMD9LQ8IVG5 1584 aa23.08■■□□□ 1.29
ATP7B-208ENST00000482841 POLR1AO95602 1720 aaPredicted RBP23.06■■□□□ 1.28
ATP7B-208ENST00000482841 ABCC2Q92887 1545 aa23.06■■□□□ 1.28
ATP7B-208ENST00000482841 SPATA31E1Q6ZUB1 1445 aa23.05■■□□□ 1.28
ATP7B-208ENST00000482841 CCDC141Q6ZP82 1450 aa23.05■■□□□ 1.28
ATP7B-208ENST00000482841 NBPF8Q3BBV2 869 aa23.05■■□□□ 1.28
ATP7B-208ENST00000482841 RSPH4AQ5TD94 716 aa23.03■■□□□ 1.28
ATP7B-208ENST00000482841 MAST1Q9Y2H9 1570 aa23.03■■□□□ 1.28
ATP7B-208ENST00000482841 TSPY4P0CV99 314 aa23.03■■□□□ 1.28
ATP7B-208ENST00000482841 TSPY10P0CW01 314 aa23.03■■□□□ 1.28
ATP7B-208ENST00000482841 CNTLNQ9NXG0 1405 aa23.01■■□□□ 1.27
ATP7B-208ENST00000482841 CLASP1Q7Z460 1538 aa23.01■■□□□ 1.27
ATP7B-208ENST00000482841 KIF15Q9NS87 1388 aa23■■□□□ 1.27
ATP7B-208ENST00000482841 TTC37Q6PGP7 1564 aa23■■□□□ 1.27
ATP7B-208ENST00000482841 PKD2Q13563 968 aa22.99■■□□□ 1.27
ATP7B-208ENST00000482841 SUPT16HQ9Y5B9 1047 aaKnown RBP22.99■■□□□ 1.27
ATP7B-208ENST00000482841 CCDC7Q96M83 1385 aa22.99■■□□□ 1.27
ATP7B-208ENST00000482841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.99■■□□□ 1.27
ATP7B-208ENST00000482841 ERCC6L2Q5T890 1561 aa22.98■■□□□ 1.27
ATP7B-208ENST00000482841 ARHGEF12Q9NZN5 1544 aa22.97■■□□□ 1.27
ATP7B-208ENST00000482841 NUP155O75694 1391 aa22.97■■□□□ 1.27
ATP7B-208ENST00000482841 UHRF1BP1Q6BDS2 1440 aa22.96■■□□□ 1.27
ATP7B-208ENST00000482841 MYO5CQ9NQX4 1742 aa22.96■■□□□ 1.27
ATP7B-208ENST00000482841 UHRF1BP1LA0JNW5 1464 aa22.95■■□□□ 1.27
ATP7B-208ENST00000482841 HNRNPMP52272 730 aaKnown RBP eCLIP22.95■■□□□ 1.26
ATP7B-208ENST00000482841 PLEKHH2Q8IVE3 1493 aa22.95■■□□□ 1.26
ATP7B-208ENST00000482841 SYCP2Q9BX26 1530 aa22.93■■□□□ 1.26
ATP7B-208ENST00000482841 PLXNC1O60486 1568 aa22.92■■□□□ 1.26
ATP7B-208ENST00000482841 ARHGAP5Q13017 1502 aa22.92■■□□□ 1.26
ATP7B-208ENST00000482841 UNC13BO14795 1591 aa22.91■■□□□ 1.26
ATP7B-208ENST00000482841 C11orf95C9JLR9 678 aaPredicted RBP22.91■■□□□ 1.26
ATP7B-208ENST00000482841 FAM135AQ9P2D6 1515 aa22.89■■□□□ 1.25
ATP7B-208ENST00000482841 RALGAPBQ86X10 1494 aa22.88■■□□□ 1.25
ATP7B-208ENST00000482841 ZCCHC11Q5TAX3 1644 aaKnown RBP22.88■■□□□ 1.25
ATP7B-208ENST00000482841 KDM5CP41229 1560 aa22.88■■□□□ 1.25
ATP7B-208ENST00000482841 KIF7Q2M1P5 1343 aa22.85■■□□□ 1.25
ATP7B-208ENST00000482841 PLCH2O75038 1416 aa22.83■■□□□ 1.24
ATP7B-208ENST00000482841 ARID4BQ4LE39 1312 aaPredicted RBP22.82■■□□□ 1.24
ATP7B-208ENST00000482841 USP47Q96K76 1375 aa22.82■■□□□ 1.24
ATP7B-208ENST00000482841 IQGAP3Q86VI3 1631 aa22.81■■□□□ 1.24
ATP7B-208ENST00000482841 BCORL1Q5H9F3 1711 aa22.8■■□□□ 1.24
ATP7B-208ENST00000482841 ARAP3Q8WWN8 1544 aa22.8■■□□□ 1.24
ATP7B-208ENST00000482841 DUOX2Q9NRD8 1548 aa22.8■■□□□ 1.24
ATP7B-208ENST00000482841 MAGI2Q86UL8 1455 aa22.8■■□□□ 1.24
ATP7B-208ENST00000482841 PRKRIP1Q9H875 184 aaPredicted RBP22.8■■□□□ 1.24
ATP7B-208ENST00000482841 ABCC1P33527 1531 aa22.77■■□□□ 1.24
ATP7B-208ENST00000482841 ERBINQ96RT1 1412 aa22.77■■□□□ 1.23
ATP7B-208ENST00000482841 ATP10AO60312 1499 aa22.73■■□□□ 1.23
ATP7B-208ENST00000482841 EFCAB2Q5VUJ9 269 aa22.71■■□□□ 1.23
ATP7B-208ENST00000482841 PLA2R1Q13018 1463 aa22.71■■□□□ 1.23
ATP7B-208ENST00000482841 ROCK2O75116 1388 aaKnown RBP22.71■■□□□ 1.23
ATP7B-208ENST00000482841 DHX29Q7Z478 1369 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms