RNA–Protein interactions for RNA: ENST00000482651.5

HDGF-208, Transcript of heparin binding growth factor, human

TSL 3

Gene HDGF, Length 966 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDGF-208	ENST00000482651	RAPGEF3	O95398	923 aa		14.12	□□□□□ -0.15
HDGF-208	ENST00000482651	TRO	Q12816	1431 aa	Predicted RBP	14.12	□□□□□ -0.15
HDGF-208	ENST00000482651	FANCA	O15360	1455 aa		14.12	□□□□□ -0.15
HDGF-208	ENST00000482651	AKNA	Q7Z591	1439 aa		14.11	□□□□□ -0.15
HDGF-208	ENST00000482651	PCF11	O94913	1555 aa	Known RBP	14.1	□□□□□ -0.15
HDGF-208	ENST00000482651	PLCH2	O75038	1416 aa		14.1	□□□□□ -0.15
HDGF-208	ENST00000482651	CCDC18	Q5T9S5	1454 aa		14.1	□□□□□ -0.15
HDGF-208	ENST00000482651	DENND4B	O75064	1496 aa	Predicted RBP	14.09	□□□□□ -0.15
HDGF-208	ENST00000482651	FYCO1	Q9BQS8	1478 aa		14.09	□□□□□ -0.15
HDGF-208	ENST00000482651	CFAP74	Q9C0B2	1584 aa		14.09	□□□□□ -0.15
HDGF-208	ENST00000482651	FRMPD1	Q5SYB0	1578 aa		14.08	□□□□□ -0.16
HDGF-208	ENST00000482651	KIF14	Q15058	1648 aa		14.07	□□□□□ -0.16
HDGF-208	ENST00000482651	PRKCSH	P14314	528 aa	Predicted RBP	14.06	□□□□□ -0.16
HDGF-208	ENST00000482651	EFCAB2	Q5VUJ9	269 aa		14.05	□□□□□ -0.16
HDGF-208	ENST00000482651	CEP162	Q5TB80	1403 aa		14.04	□□□□□ -0.16
HDGF-208	ENST00000482651	LRRIQ1	Q96JM4	1722 aa		14.04	□□□□□ -0.16
HDGF-208	ENST00000482651	SCAPER	Q9BY12	1400 aa		14.03	□□□□□ -0.16
HDGF-208	ENST00000482651	ZMYM4	Q5VZL5	1548 aa		14.01	□□□□□ -0.17
HDGF-208	ENST00000482651	POGZ	Q7Z3K3	1410 aa		14.01	□□□□□ -0.17
HDGF-208	ENST00000482651	PLCB2	Q00722	1185 aa		14.01	□□□□□ -0.17
HDGF-208	ENST00000482651	RICTOR	Q6R327	1708 aa		14.01	□□□□□ -0.17
HDGF-208	ENST00000482651	ARHGEF40	Q8TER5	1519 aa		14	□□□□□ -0.17
HDGF-208	ENST00000482651	ARHGAP5	Q13017	1502 aa		14	□□□□□ -0.17
HDGF-208	ENST00000482651	MAGI2	Q86UL8	1455 aa		13.99	□□□□□ -0.17
HDGF-208	ENST00000482651	MYO5C	Q9NQX4	1742 aa		13.99	□□□□□ -0.17
HDGF-208	ENST00000482651	SLC4A2	P04920	1241 aa		13.98	□□□□□ -0.17
HDGF-208	ENST00000482651	ZFYVE16	Q7Z3T8	1539 aa		13.97	□□□□□ -0.17
HDGF-208	ENST00000482651	YEATS2	Q9ULM3	1422 aa		13.97	□□□□□ -0.17
HDGF-208	ENST00000482651	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.96	□□□□□ -0.17
HDGF-208	ENST00000482651	LOC105371045	A0A1W2PR82	267 aa		13.96	□□□□□ -0.17
HDGF-208	ENST00000482651	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.96	□□□□□ -0.17
HDGF-208	ENST00000482651	ZNF518A	Q6AHZ1	1483 aa		13.95	□□□□□ -0.18
HDGF-208	ENST00000482651	ATXN8OS	P0DMR3	200 aa		13.95	□□□□□ -0.18
HDGF-208	ENST00000482651	RNF216	Q9NWF9	866 aa	Predicted RBP	13.95	□□□□□ -0.18
HDGF-208	ENST00000482651	PREX2	Q70Z35	1606 aa		13.94	□□□□□ -0.18
HDGF-208	ENST00000482651	MTUS2	Q5JR59	1369 aa		13.94	□□□□□ -0.18
HDGF-208	ENST00000482651	ADAMTSL3	P82987	1691 aa		13.92	□□□□□ -0.18
HDGF-208	ENST00000482651	AFAP1	Q8N556	730 aa		13.92	□□□□□ -0.18
HDGF-208	ENST00000482651	KDM5C	P41229	1560 aa		13.92	□□□□□ -0.18
HDGF-208	ENST00000482651	ABCC1	P33527	1531 aa		13.91	□□□□□ -0.18
HDGF-208	ENST00000482651	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.91	□□□□□ -0.18
HDGF-208	ENST00000482651	ATP10A	O60312	1499 aa		13.91	□□□□□ -0.18
HDGF-208	ENST00000482651	ARHGEF12	Q9NZN5	1544 aa		13.9	□□□□□ -0.18
HDGF-208	ENST00000482651	BCORL1	Q5H9F3	1711 aa		13.9	□□□□□ -0.18
HDGF-208	ENST00000482651	CDC42BPB	Q9Y5S2	1711 aa		13.9	□□□□□ -0.18
HDGF-208	ENST00000482651	CCNB3	Q8WWL7	1395 aa		13.9	□□□□□ -0.18
HDGF-208	ENST00000482651	PTPRM	P28827	1452 aa		13.9	□□□□□ -0.18
HDGF-208	ENST00000482651	EHBP1L1	Q8N3D4	1523 aa		13.9	□□□□□ -0.19
HDGF-208	ENST00000482651	C9orf84	Q5VXU9	1444 aa		13.9	□□□□□ -0.19
HDGF-208	ENST00000482651	TRAPPC8	Q9Y2L5	1435 aa		13.9	□□□□□ -0.19
HDGF-208	ENST00000482651	VPS8	Q8N3P4	1428 aa		13.89	□□□□□ -0.19
HDGF-208	ENST00000482651	MLH3	Q9UHC1	1453 aa		13.88	□□□□□ -0.19
HDGF-208	ENST00000482651	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.88	□□□□□ -0.19
HDGF-208	ENST00000482651	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.87	□□□□□ -0.19
HDGF-208	ENST00000482651	CDC42BPA	Q5VT25	1732 aa		13.87	□□□□□ -0.19
HDGF-208	ENST00000482651	MADD	Q8WXG6	1647 aa		13.86	□□□□□ -0.19
HDGF-208	ENST00000482651	MYT1L	Q9UL68	1186 aa		13.86	□□□□□ -0.19
HDGF-208	ENST00000482651	HECW2	Q9P2P5	1572 aa		13.86	□□□□□ -0.19
HDGF-208	ENST00000482651	SAMD9L	Q8IVG5	1584 aa		13.85	□□□□□ -0.19
HDGF-208	ENST00000482651	KIAA1107	Q9UPP5	1409 aa		13.85	□□□□□ -0.19
HDGF-208	ENST00000482651	PLEKHH2	Q8IVE3	1493 aa		13.85	□□□□□ -0.19
HDGF-208	ENST00000482651	ITSN2	Q9NZM3	1697 aa		13.85	□□□□□ -0.19
HDGF-208	ENST00000482651	SIGLEC1	Q9BZZ2	1709 aa		13.84	□□□□□ -0.19
HDGF-208	ENST00000482651	DIP2C	Q9Y2E4	1556 aa		13.84	□□□□□ -0.19
HDGF-208	ENST00000482651	HAP1	P54257	671 aa	Predicted RBP	13.84	□□□□□ -0.19
HDGF-208	ENST00000482651	MLEC	Q14165	292 aa		13.84	□□□□□ -0.19
HDGF-208	ENST00000482651	BCAN	Q96GW7	911 aa		13.84	□□□□□ -0.19
HDGF-208	ENST00000482651	SYCP2	Q9BX26	1530 aa		13.84	□□□□□ -0.19
HDGF-208	ENST00000482651	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
HDGF-208	ENST00000482651	TAOK2	Q9UL54	1235 aa		13.83	□□□□□ -0.2
HDGF-208	ENST00000482651	TIAM1	Q13009	1591 aa		13.83	□□□□□ -0.2
HDGF-208	ENST00000482651	RERE	Q9P2R6	1566 aa		13.83	□□□□□ -0.2
HDGF-208	ENST00000482651	MYCN	P04198	464 aa	Predicted RBP	13.81	□□□□□ -0.2
HDGF-208	ENST00000482651	ABCA6	Q8N139	1617 aa		13.81	□□□□□ -0.2
HDGF-208	ENST00000482651	SPAG9	O60271	1321 aa	Known RBP	13.81	□□□□□ -0.2
HDGF-208	ENST00000482651	NCOA2	Q15596	1464 aa		13.8	□□□□□ -0.2
HDGF-208	ENST00000482651	RIMS1	Q86UR5	1692 aa	Known RBP	13.8	□□□□□ -0.2
HDGF-208	ENST00000482651	AGL	P35573	1532 aa		13.8	□□□□□ -0.2
HDGF-208	ENST00000482651	ZNF644	Q9H582	1327 aa	Predicted RBP	13.79	□□□□□ -0.2
HDGF-208	ENST00000482651	LRRC9	Q6ZRR7	1453 aa		13.79	□□□□□ -0.2
HDGF-208	ENST00000482651	MAP3K1	Q13233	1512 aa		13.79	□□□□□ -0.2
HDGF-208	ENST00000482651	KIDINS220	Q9ULH0	1771 aa		13.78	□□□□□ -0.2
HDGF-208	ENST00000482651	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.77	□□□□□ -0.21
HDGF-208	ENST00000482651	MBD5	Q9P267	1494 aa		13.77	□□□□□ -0.21
HDGF-208	ENST00000482651	ATP7A	Q04656	1500 aa		13.75	□□□□□ -0.21
HDGF-208	ENST00000482651	KANK4	Q5T7N3	995 aa	Predicted RBP	13.75	□□□□□ -0.21
HDGF-208	ENST00000482651	INO80	Q9ULG1	1556 aa	Predicted RBP	13.75	□□□□□ -0.21
HDGF-208	ENST00000482651	LMTK3	Q96Q04	1460 aa		13.74	□□□□□ -0.21
HDGF-208	ENST00000482651	FER1L4	A9Z1Z3	1794 aa		13.74	□□□□□ -0.21
HDGF-208	ENST00000482651	CAMSAP2	Q08AD1	1489 aa		13.73	□□□□□ -0.21
HDGF-208	ENST00000482651	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.73	□□□□□ -0.21
HDGF-208	ENST00000482651	RSPH4A	Q5TD94	716 aa		13.72	□□□□□ -0.21
HDGF-208	ENST00000482651	A2M	P01023	1474 aa		13.72	□□□□□ -0.21
HDGF-208	ENST00000482651	CCDC141	Q6ZP82	1450 aa		13.72	□□□□□ -0.21
HDGF-208	ENST00000482651	CEBPA	P49715	358 aa	Predicted RBP	13.71	□□□□□ -0.21
HDGF-208	ENST00000482651	APLP2	Q06481	763 aa		13.71	□□□□□ -0.21
HDGF-208	ENST00000482651	ESF1	Q9H501	851 aa	Known RBP	13.71	□□□□□ -0.21
HDGF-208	ENST00000482651	PLXNC1	O60486	1568 aa		13.71	□□□□□ -0.22
HDGF-208	ENST00000482651	CNTLN	Q9NXG0	1405 aa		13.7	□□□□□ -0.22
HDGF-208	ENST00000482651	MYOM3	Q5VTT5	1437 aa		13.68	□□□□□ -0.22

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