RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 ARHGEF40Q8TER5 1519 aa24.62■■□□□ 1.53
EXOSC3-205ENST00000482614 MAGI2Q86UL8 1455 aa24.62■■□□□ 1.53
EXOSC3-205ENST00000482614 POGZQ7Z3K3 1410 aa24.61■■□□□ 1.53
EXOSC3-205ENST00000482614 CDC42BPBQ9Y5S2 1711 aa24.61■■□□□ 1.53
EXOSC3-205ENST00000482614 LOC105371045A0A1W2PR82 267 aa24.59■■□□□ 1.53
EXOSC3-205ENST00000482614 ARID4BQ4LE39 1312 aaPredicted RBP24.59■■□□□ 1.53
EXOSC3-205ENST00000482614 PREX2Q70Z35 1606 aa24.58■■□□□ 1.53
EXOSC3-205ENST00000482614 ZFYVE16Q7Z3T8 1539 aa24.58■■□□□ 1.53
EXOSC3-205ENST00000482614 YEATS2Q9ULM3 1422 aa24.55■■□□□ 1.52
EXOSC3-205ENST00000482614 ADAMTSL3P82987 1691 aa24.55■■□□□ 1.52
EXOSC3-205ENST00000482614 ZNF518AQ6AHZ1 1483 aa24.54■■□□□ 1.52
EXOSC3-205ENST00000482614 BCORL1Q5H9F3 1711 aa24.54■■□□□ 1.52
EXOSC3-205ENST00000482614 CDC42BPAQ5VT25 1732 aa24.54■■□□□ 1.52
EXOSC3-205ENST00000482614 MTUS2Q5JR59 1369 aa24.53■■□□□ 1.52
EXOSC3-205ENST00000482614 AFAP1Q8N556 730 aa24.5■■□□□ 1.51
EXOSC3-205ENST00000482614 KDM5CP41229 1560 aa24.48■■□□□ 1.51
EXOSC3-205ENST00000482614 GPATCH8Q9UKJ3 1502 aaKnown RBP24.48■■□□□ 1.51
EXOSC3-205ENST00000482614 ABCC1P33527 1531 aa24.47■■□□□ 1.51
EXOSC3-205ENST00000482614 ATP10AO60312 1499 aa24.47■■□□□ 1.51
EXOSC3-205ENST00000482614 MYT1LQ9UL68 1186 aa24.45■■□□□ 1.5
EXOSC3-205ENST00000482614 ITSN2Q9NZM3 1697 aa24.45■■□□□ 1.5
EXOSC3-205ENST00000482614 EHBP1L1Q8N3D4 1523 aa24.45■■□□□ 1.5
EXOSC3-205ENST00000482614 PTPRMP28827 1452 aa24.45■■□□□ 1.5
EXOSC3-205ENST00000482614 CCNB3Q8WWL7 1395 aa24.44■■□□□ 1.5
EXOSC3-205ENST00000482614 MADDQ8WXG6 1647 aa24.44■■□□□ 1.5
EXOSC3-205ENST00000482614 ZNF777Q9ULD5 760 aaPredicted RBP24.44■■□□□ 1.5
EXOSC3-205ENST00000482614 ARHGEF12Q9NZN5 1544 aa24.44■■□□□ 1.5
EXOSC3-205ENST00000482614 C9orf84Q5VXU9 1444 aa24.44■■□□□ 1.5
EXOSC3-205ENST00000482614 HECW2Q9P2P5 1572 aa24.43■■□□□ 1.5
EXOSC3-205ENST00000482614 TRAPPC8Q9Y2L5 1435 aa24.43■■□□□ 1.5
EXOSC3-205ENST00000482614 SIGLEC1Q9BZZ2 1709 aa24.42■■□□□ 1.5
EXOSC3-205ENST00000482614 CFDP1Q9UEE9 299 aaPredicted RBP24.42■■□□□ 1.5
EXOSC3-205ENST00000482614 MLH3Q9UHC1 1453 aa24.41■■□□□ 1.5
EXOSC3-205ENST00000482614 VPS8Q8N3P4 1428 aa24.41■■□□□ 1.5
EXOSC3-205ENST00000482614 SAMD9LQ8IVG5 1584 aa24.4■■□□□ 1.5
EXOSC3-205ENST00000482614 RIMS1Q86UR5 1692 aaKnown RBP24.37■■□□□ 1.49
EXOSC3-205ENST00000482614 MLECQ14165 292 aa24.37■■□□□ 1.49
EXOSC3-205ENST00000482614 PLEKHH2Q8IVE3 1493 aa24.37■■□□□ 1.49
EXOSC3-205ENST00000482614 DIP2CQ9Y2E4 1556 aa24.36■■□□□ 1.49
EXOSC3-205ENST00000482614 KIAA1107Q9UPP5 1409 aa24.35■■□□□ 1.49
EXOSC3-205ENST00000482614 TIAM1Q13009 1591 aa24.35■■□□□ 1.49
EXOSC3-205ENST00000482614 HNRNPMP52272 730 aaKnown RBP eCLIP24.35■■□□□ 1.492e-9■□□□□ 10.1
EXOSC3-205ENST00000482614 SYCP2Q9BX26 1530 aa24.35■■□□□ 1.49
EXOSC3-205ENST00000482614 REREQ9P2R6 1566 aa24.33■■□□□ 1.49
EXOSC3-205ENST00000482614 ABCA6Q8N139 1617 aa24.33■■□□□ 1.49
EXOSC3-205ENST00000482614 SUPT6HQ7KZ85 1726 aaKnown RBP24.32■■□□□ 1.48
EXOSC3-205ENST00000482614 KIDINS220Q9ULH0 1771 aa24.31■■□□□ 1.48
EXOSC3-205ENST00000482614 FER1L4A9Z1Z3 1794 aa24.31■■□□□ 1.48
EXOSC3-205ENST00000482614 SPAG9O60271 1321 aaKnown RBP24.3■■□□□ 1.48
EXOSC3-205ENST00000482614 NCOA2Q15596 1464 aa24.29■■□□□ 1.48
EXOSC3-205ENST00000482614 MAP3K1Q13233 1512 aa24.26■■□□□ 1.47
EXOSC3-205ENST00000482614 LRRC9Q6ZRR7 1453 aa24.26■■□□□ 1.47
EXOSC3-205ENST00000482614 AGLP35573 1532 aa24.25■■□□□ 1.47
EXOSC3-205ENST00000482614 ZNF644Q9H582 1327 aaPredicted RBP24.25■■□□□ 1.47
EXOSC3-205ENST00000482614 PLPPR3Q6T4P5 718 aa24.23■■□□□ 1.47
EXOSC3-205ENST00000482614 ATP7AQ04656 1500 aa24.22■■□□□ 1.47
EXOSC3-205ENST00000482614 MBD5Q9P267 1494 aa24.2■■□□□ 1.47
EXOSC3-205ENST00000482614 INO80Q9ULG1 1556 aaPredicted RBP24.2■■□□□ 1.46
EXOSC3-205ENST00000482614 APLP2Q06481 763 aa24.17■■□□□ 1.46
EXOSC3-205ENST00000482614 KANK4Q5T7N3 995 aaPredicted RBP24.17■■□□□ 1.46
EXOSC3-205ENST00000482614 LMTK3Q96Q04 1460 aa24.16■■□□□ 1.46
EXOSC3-205ENST00000482614 RSPH4AQ5TD94 716 aa24.16■■□□□ 1.46
EXOSC3-205ENST00000482614 ESF1Q9H501 851 aaKnown RBP24.16■■□□□ 1.46
EXOSC3-205ENST00000482614 CAMSAP2Q08AD1 1489 aa24.15■■□□□ 1.46
EXOSC3-205ENST00000482614 RTEL1-TNFRSF6BF6WH68 1400 aa24.14■■□□□ 1.45
EXOSC3-205ENST00000482614 A2MP01023 1474 aa24.13■■□□□ 1.45
EXOSC3-205ENST00000482614 CEBPAP49715 358 aaPredicted RBP24.12■■□□□ 1.45
EXOSC3-205ENST00000482614 CCDC141Q6ZP82 1450 aa24.12■■□□□ 1.45
EXOSC3-205ENST00000482614 ADGBQ8N7X0 1667 aa24.11■■□□□ 1.45
EXOSC3-205ENST00000482614 PLXNC1O60486 1568 aa24.11■■□□□ 1.45
EXOSC3-205ENST00000482614 CNTLNQ9NXG0 1405 aa24.1■■□□□ 1.45
EXOSC3-205ENST00000482614 ARHGEF5Q12774 1597 aa24.08■■□□□ 1.44
EXOSC3-205ENST00000482614 SETD1BQ9UPS6 1966 aaKnown RBP24.07■■□□□ 1.44
EXOSC3-205ENST00000482614 C3P01024 1663 aa24.06■■□□□ 1.44
EXOSC3-205ENST00000482614 MYOM3Q5VTT5 1437 aa24.06■■□□□ 1.44
EXOSC3-205ENST00000482614 MIA2Q96PC5 1412 aa24.06■■□□□ 1.44
EXOSC3-205ENST00000482614 PREX1Q8TCU6 1659 aa24.05■■□□□ 1.44
EXOSC3-205ENST00000482614 TSPY4P0CV99 314 aa24.05■■□□□ 1.44
EXOSC3-205ENST00000482614 TSPY10P0CW01 314 aa24.05■■□□□ 1.44
EXOSC3-205ENST00000482614 DHX29Q7Z478 1369 aaKnown RBP24.03■■□□□ 1.44
EXOSC3-205ENST00000482614 HSPA2P54652 639 aa24.03■■□□□ 1.44
EXOSC3-205ENST00000482614 GGT6Q6P531 493 aa24.02■■□□□ 1.44
EXOSC3-205ENST00000482614 MROH2AA6NES4 1674 aa24.02■■□□□ 1.44
EXOSC3-205ENST00000482614 PPP6R1Q9UPN7 881 aa24.01■■□□□ 1.43
EXOSC3-205ENST00000482614 UHRF1BP1Q6BDS2 1440 aa23.99■■□□□ 1.43
EXOSC3-205ENST00000482614 ZMYM3Q14202 1370 aa23.98■■□□□ 1.43
EXOSC3-205ENST00000482614 CLTCQ00610 1675 aaKnown RBP23.97■■□□□ 1.43
EXOSC3-205ENST00000482614 MAST1Q9Y2H9 1570 aa23.95■■□□□ 1.43
EXOSC3-205ENST00000482614 KIF3BO15066 747 aa23.94■■□□□ 1.42
EXOSC3-205ENST00000482614 NPATQ14207 1427 aa23.93■■□□□ 1.42
EXOSC3-205ENST00000482614 PTPN23Q9H3S7 1636 aa23.91■■□□□ 1.42
EXOSC3-205ENST00000482614 FGD6Q6ZV73 1430 aa23.88■■□□□ 1.41
EXOSC3-205ENST00000482614 FAM135AQ9P2D6 1515 aa23.86■■□□□ 1.41
EXOSC3-205ENST00000482614 TCOF1Q13428 1488 aaKnown RBP23.85■■□□□ 1.41
EXOSC3-205ENST00000482614 PTPRKQ15262 1439 aa23.84■■□□□ 1.41
EXOSC3-205ENST00000482614 ABCC5O15440 1437 aa23.84■■□□□ 1.41
EXOSC3-205ENST00000482614 SHANK2Q9UPX8 1470 aa23.83■■□□□ 1.41
EXOSC3-205ENST00000482614 ILDR1Q86SU0 546 aaPredicted RBP23.83■■□□□ 1.41
EXOSC3-205ENST00000482614 DMRT2Q9Y5R5 561 aa23.83■■□□□ 1.41
EXOSC3-205ENST00000482614 KDM5DQ9BY66 1539 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms