RNA–Protein interactions for RNA: ENST00000482299.1

NDUFA4-204, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 606 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-204ENST00000482299 CDAN1Q8IWY9 1227 aa11.22□□□□□ -0.61
NDUFA4-204ENST00000482299 RYDENQ9NUL5 291 aaKnown RBP11.21□□□□□ -0.61
NDUFA4-204ENST00000482299 DNAJC5Q9H3Z4 198 aa11.19□□□□□ -0.62
NDUFA4-204ENST00000482299 ZSWIM6Q9HCJ5 1215 aa11.19□□□□□ -0.62
NDUFA4-204ENST00000482299 HOXB1P14653 301 aaPredicted RBP11.16□□□□□ -0.62
NDUFA4-204ENST00000482299 TMC2Q8TDI7 906 aa11.15□□□□□ -0.62
NDUFA4-204ENST00000482299 DCAF8L2P0C7V8 631 aa11.14□□□□□ -0.63
NDUFA4-204ENST00000482299 PPP1R37O75864 691 aa11.13□□□□□ -0.63
NDUFA4-204ENST00000482299 FAM205CA6NFA0 338 aa11.12□□□□□ -0.63
NDUFA4-204ENST00000482299 KIF3CO14782 793 aa11.12□□□□□ -0.63
NDUFA4-204ENST00000482299 C2orf72A6NCS6 295 aa11.11□□□□□ -0.63
NDUFA4-204ENST00000482299 HS3ST6Q96QI5 342 aa11.11□□□□□ -0.63
NDUFA4-204ENST00000482299 NKX1-1Q15270 411 aaPredicted RBP11.09□□□□□ -0.63
NDUFA4-204ENST00000482299 ERBB3P21860 1342 aa11.08□□□□□ -0.64
NDUFA4-204ENST00000482299 GPR153Q6NV75 609 aa11.06□□□□□ -0.64
NDUFA4-204ENST00000482299 AMER1Q5JTC6 1135 aaPredicted RBP11.04□□□□□ -0.64
NDUFA4-204ENST00000482299 SLC34A2O95436 690 aa11.02□□□□□ -0.65
NDUFA4-204ENST00000482299 ARSIQ5FYB1 569 aa11.02□□□□□ -0.65
NDUFA4-204ENST00000482299 GPHNQ9NQX3 736 aaPredicted RBP11.01□□□□□ -0.65
NDUFA4-204ENST00000482299 POTEB3A0JP26 581 aa11□□□□□ -0.65
NDUFA4-204ENST00000482299 VARS2Q5ST30 1063 aaKnown RBP11□□□□□ -0.65
NDUFA4-204ENST00000482299 POTEBQ6S5H4 581 aa11□□□□□ -0.65
NDUFA4-204ENST00000482299 FOXK1P85037 733 aa10.98□□□□□ -0.65
NDUFA4-204ENST00000482299 GTPBP6O43824 516 aaPredicted RBP10.96□□□□□ -0.65
NDUFA4-204ENST00000482299 PCDHGA4Q9Y5G9 962 aa10.96□□□□□ -0.65
NDUFA4-204ENST00000482299 KRTAP3-3Q9BYR6 98 aa10.95□□□□□ -0.66
NDUFA4-204ENST00000482299 KRTAP3-2Q9BYR7 98 aa10.95□□□□□ -0.66
NDUFA4-204ENST00000482299 ZNF316A6NFI3 1004 aaPredicted RBP10.94□□□□□ -0.66
NDUFA4-204ENST00000482299 PLPP6Q8IY26 295 aa10.94□□□□□ -0.66
NDUFA4-204ENST00000482299 SPNS2Q8IVW8 549 aa10.93□□□□□ -0.66
NDUFA4-204ENST00000482299 ZNF687Q8N1G0 1237 aa10.93□□□□□ -0.66
NDUFA4-204ENST00000482299 KHSRPQ92945 711 aaKnown RBP eCLIP10.93□□□□□ -0.66
NDUFA4-204ENST00000482299 NUDT7P0C024 238 aa10.92□□□□□ -0.66
NDUFA4-204ENST00000482299 DSG2Q14126 1118 aa10.92□□□□□ -0.66
NDUFA4-204ENST00000482299 TBC1D12O60347 775 aa10.9□□□□□ -0.66
NDUFA4-204ENST00000482299 PDE4AP27815 886 aa10.9□□□□□ -0.66
NDUFA4-204ENST00000482299 PTCD2Q8WV60 388 aaKnown RBP10.9□□□□□ -0.66
NDUFA4-204ENST00000482299 CRISPLD2Q9H0B8 497 aa10.9□□□□□ -0.66
NDUFA4-204ENST00000482299 PSDA5PKW4 1024 aaPredicted RBP10.88□□□□□ -0.67
NDUFA4-204ENST00000482299 RTN4Q9NQC3 1192 aaKnown RBP10.88□□□□□ -0.67
NDUFA4-204ENST00000482299 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
NDUFA4-204ENST00000482299 PPP1R15BQ5SWA1 713 aa10.87□□□□□ -0.67
NDUFA4-204ENST00000482299 BBXQ8WY36 941 aaPredicted RBP10.87□□□□□ -0.67
NDUFA4-204ENST00000482299 LHX6Q9UPM6 363 aa10.85□□□□□ -0.67
NDUFA4-204ENST00000482299 NCKAP5LQ9HCH0 1330 aa10.84□□□□□ -0.67
NDUFA4-204ENST00000482299 PBX2P40425 430 aa10.83□□□□□ -0.68
NDUFA4-204ENST00000482299 DDX27Q96GQ7 796 aaKnown RBP10.82□□□□□ -0.68
NDUFA4-204ENST00000482299 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.82□□□□□ -0.68
NDUFA4-204ENST00000482299 LARP6Q9BRS8 491 aaKnown RBP10.81□□□□□ -0.68
NDUFA4-204ENST00000482299 OXER1Q8TDS5 423 aa10.8□□□□□ -0.68
NDUFA4-204ENST00000482299 KDM4FA0A1W2PPD8 638 aa10.78□□□□□ -0.68
NDUFA4-204ENST00000482299 PTGER2P43116 358 aa10.78□□□□□ -0.68
NDUFA4-204ENST00000482299 UPF1Q92900 1129 aaKnown RBP eCLIP10.78□□□□□ -0.68
NDUFA4-204ENST00000482299 MFSD10Q14728 455 aa10.77□□□□□ -0.69
NDUFA4-204ENST00000482299 PPP4R3BQ5MIZ7 849 aa10.76□□□□□ -0.69
NDUFA4-204ENST00000482299 LSM11P83369 360 aaKnown RBP eCLIP10.75□□□□□ -0.69
NDUFA4-204ENST00000482299 ANKRD13DQ6ZTN6 518 aa10.75□□□□□ -0.69
NDUFA4-204ENST00000482299 SPRYD3Q8NCJ5 442 aa10.75□□□□□ -0.69
NDUFA4-204ENST00000482299 ARHGAP33O14559 1287 aa10.72□□□□□ -0.69
NDUFA4-204ENST00000482299 KCNH8Q96L42 1107 aa10.72□□□□□ -0.69
NDUFA4-204ENST00000482299 CADPS2Q86UW7 1296 aa10.71□□□□□ -0.69
NDUFA4-204ENST00000482299 MYT1LQ9UL68 1186 aa10.71□□□□□ -0.69
NDUFA4-204ENST00000482299 RNF166Q96A37 237 aaPredicted RBP10.7□□□□□ -0.7
NDUFA4-204ENST00000482299 AXIN2Q9Y2T1 843 aa10.69□□□□□ -0.7
NDUFA4-204ENST00000482299 MAP3K9P80192 1104 aa10.68□□□□□ -0.7
NDUFA4-204ENST00000482299 POTEEQ6S8J3 1075 aa10.67□□□□□ -0.7
NDUFA4-204ENST00000482299 EVI5O60447 810 aa10.66□□□□□ -0.7
NDUFA4-204ENST00000482299 ZNF454Q8N9F8 522 aa10.66□□□□□ -0.7
NDUFA4-204ENST00000482299 PAXIP1Q6ZW49 1069 aaPredicted RBP10.64□□□□□ -0.71
NDUFA4-204ENST00000482299 JPH4Q96JJ6 628 aa10.64□□□□□ -0.71
NDUFA4-204ENST00000482299 CFAP44Q96MT7 982 aa10.64□□□□□ -0.71
NDUFA4-204ENST00000482299 ANO8Q9HCE9 1232 aaPredicted RBP10.64□□□□□ -0.71
NDUFA4-204ENST00000482299 ADGRD1Q6QNK2 874 aa10.63□□□□□ -0.71
NDUFA4-204ENST00000482299 EMILIN3Q9NT22 766 aa10.63□□□□□ -0.71
NDUFA4-204ENST00000482299 TK2O00142 265 aa10.62□□□□□ -0.71
NDUFA4-204ENST00000482299 FOSBP53539 338 aa10.62□□□□□ -0.71
NDUFA4-204ENST00000482299 PSEN2P49810 448 aa10.61□□□□□ -0.71
NDUFA4-204ENST00000482299 CAMK2BQ13554 666 aa10.61□□□□□ -0.71
NDUFA4-204ENST00000482299 KCNK17Q96T54 332 aa10.61□□□□□ -0.71
NDUFA4-204ENST00000482299 BCL2L12Q9HB09 334 aa10.61□□□□□ -0.71
NDUFA4-204ENST00000482299 PTPREP23469 700 aa10.59□□□□□ -0.71
NDUFA4-204ENST00000482299 DMRTA1Q5VZB9 504 aa10.58□□□□□ -0.72
NDUFA4-204ENST00000482299 ZDHHC16Q969W1 377 aa10.58□□□□□ -0.72
NDUFA4-204ENST00000482299 STAC3Q96MF2 364 aa10.56□□□□□ -0.72
NDUFA4-204ENST00000482299 WDR70Q9NW82 654 aa10.55□□□□□ -0.72
NDUFA4-204ENST00000482299 DPYSL4O14531 572 aa10.54□□□□□ -0.72
NDUFA4-204ENST00000482299 PHF14O94880 888 aa10.53□□□□□ -0.72
NDUFA4-204ENST00000482299 FBXW7Q969H0 707 aa10.53□□□□□ -0.72
NDUFA4-204ENST00000482299 SLC4A5Q9BY07 1137 aa10.53□□□□□ -0.72
NDUFA4-204ENST00000482299 HRO43593 1189 aa10.52□□□□□ -0.73
NDUFA4-204ENST00000482299 TYW1BQ6NUM6 668 aa10.51□□□□□ -0.73
NDUFA4-204ENST00000482299 ADAM33Q9BZ11 813 aa10.51□□□□□ -0.73
NDUFA4-204ENST00000482299 PCDHGA10Q9Y5H3 936 aa10.51□□□□□ -0.73
NDUFA4-204ENST00000482299 E2F4Q16254 413 aa10.5□□□□□ -0.73
NDUFA4-204ENST00000482299 VPS9D1Q9Y2B5 631 aa10.5□□□□□ -0.73
NDUFA4-204ENST00000482299 EPAS1Q99814 870 aa10.49□□□□□ -0.73
NDUFA4-204ENST00000482299 SPDYE16A6NNV3 312 aaPredicted RBP10.47□□□□□ -0.73
NDUFA4-204ENST00000482299 PPP1R3GB7ZBB8 358 aa10.47□□□□□ -0.73
NDUFA4-204ENST00000482299 PDIA6Q15084 440 aa10.47□□□□□ -0.73
NDUFA4-204ENST00000482299 HCSTQ9UBK5 93 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms