RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 MYOM3Q5VTT5 1437 aa32.03■■■□□ 2.72
VPS16-207ENST00000481812 PHLDB1Q86UU1 1377 aa32.02■■■□□ 2.72
VPS16-207ENST00000481812 CFAP74Q9C0B2 1584 aa32.01■■■□□ 2.71
VPS16-207ENST00000481812 MIA2Q96PC5 1412 aa32■■■□□ 2.71
VPS16-207ENST00000481812 EFCAB2Q5VUJ9 269 aa31.99■■■□□ 2.71
VPS16-207ENST00000481812 ARHGAP5Q13017 1502 aa31.99■■■□□ 2.71
VPS16-207ENST00000481812 NEO1Q92859 1461 aa31.98■■■□□ 2.71
VPS16-207ENST00000481812 FANCAO15360 1455 aa31.97■■■□□ 2.71
VPS16-207ENST00000481812 CFDP1Q9UEE9 299 aaPredicted RBP31.97■■■□□ 2.71
VPS16-207ENST00000481812 FGD6Q6ZV73 1430 aa31.91■■■□□ 2.7
VPS16-207ENST00000481812 AKNAQ7Z591 1439 aa31.89■■■□□ 2.7
VPS16-207ENST00000481812 SAMD9LQ8IVG5 1584 aa31.87■■■□□ 2.69
VPS16-207ENST00000481812 PLEKHH2Q8IVE3 1493 aa31.87■■■□□ 2.69
VPS16-207ENST00000481812 PTPN23Q9H3S7 1636 aa31.85■■■□□ 2.69
VPS16-207ENST00000481812 TCOF1Q13428 1488 aaKnown RBP31.84■■■□□ 2.69
VPS16-207ENST00000481812 KIAA1107Q9UPP5 1409 aa31.83■■■□□ 2.69
VPS16-207ENST00000481812 ABCC1P33527 1531 aa31.82■■■□□ 2.68
VPS16-207ENST00000481812 ZNF777Q9ULD5 760 aaPredicted RBP31.82■■■□□ 2.68
VPS16-207ENST00000481812 ADGRL1O94910 1474 aa31.81■■■□□ 2.68
VPS16-207ENST00000481812 CAMSAP2Q08AD1 1489 aa31.81■■■□□ 2.68
VPS16-207ENST00000481812 RRBP1Q9P2E9 1410 aaKnown RBP31.81■■■□□ 2.68
VPS16-207ENST00000481812 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.78■■■□□ 2.68
VPS16-207ENST00000481812 ZNF644Q9H582 1327 aaPredicted RBP31.77■■■□□ 2.68
VPS16-207ENST00000481812 SCAPERQ9BY12 1400 aa31.76■■■□□ 2.68
VPS16-207ENST00000481812 DENND4BO75064 1496 aaPredicted RBP31.73■■■□□ 2.67
VPS16-207ENST00000481812 RSPH4AQ5TD94 716 aa31.73■■■□□ 2.67
VPS16-207ENST00000481812 SYCP2Q9BX26 1530 aa31.73■■■□□ 2.67
VPS16-207ENST00000481812 ARHGEF12Q9NZN5 1544 aa31.73■■■□□ 2.67
VPS16-207ENST00000481812 ARHGEF5Q12774 1597 aa31.73■■■□□ 2.67
VPS16-207ENST00000481812 MBD5Q9P267 1494 aa31.72■■■□□ 2.67
VPS16-207ENST00000481812 RICTORQ6R327 1708 aa31.69■■■□□ 2.66
VPS16-207ENST00000481812 KDM6BO15054 1643 aa31.68■■■□□ 2.66
VPS16-207ENST00000481812 COL17A1Q9UMD9 1497 aaPredicted RBP31.68■■■□□ 2.66
VPS16-207ENST00000481812 HNRNPMP52272 730 aaKnown RBP eCLIP31.68■■■□□ 2.66
VPS16-207ENST00000481812 POGZQ7Z3K3 1410 aa31.67■■■□□ 2.66
VPS16-207ENST00000481812 ZNF518AQ6AHZ1 1483 aa31.67■■■□□ 2.66
VPS16-207ENST00000481812 FAM50AQ14320 339 aaKnown RBP31.65■■■□□ 2.66
VPS16-207ENST00000481812 TRAPPC8Q9Y2L5 1435 aa31.65■■■□□ 2.66
VPS16-207ENST00000481812 CCDC141Q6ZP82 1450 aa31.64■■■□□ 2.66
VPS16-207ENST00000481812 DNMT1P26358 1616 aaKnown RBP31.64■■■□□ 2.65
VPS16-207ENST00000481812 KDM5CP41229 1560 aa31.62■■■□□ 2.65
VPS16-207ENST00000481812 FRMPD1Q5SYB0 1578 aa31.62■■■□□ 2.65
VPS16-207ENST00000481812 RAPGEF3O95398 923 aa31.6■■■□□ 2.65
VPS16-207ENST00000481812 ZMYM4Q5VZL5 1548 aa31.59■■■□□ 2.65
VPS16-207ENST00000481812 AFAP1Q8N556 730 aa31.58■■■□□ 2.65
VPS16-207ENST00000481812 ABCC5O15440 1437 aa31.58■■■□□ 2.65
VPS16-207ENST00000481812 DAPK1P53355 1430 aa31.58■■■□□ 2.65
VPS16-207ENST00000481812 CROCC2H7BZ55 1655 aa31.57■■■□□ 2.64
VPS16-207ENST00000481812 SHANK2Q9UPX8 1470 aa31.55■■■□□ 2.64
VPS16-207ENST00000481812 MAGI2Q86UL8 1455 aa31.54■■■□□ 2.64
VPS16-207ENST00000481812 MLH3Q9UHC1 1453 aa31.54■■■□□ 2.64
VPS16-207ENST00000481812 TSPY4P0CV99 314 aa31.54■■■□□ 2.64
VPS16-207ENST00000481812 TSPY10P0CW01 314 aa31.54■■■□□ 2.64
VPS16-207ENST00000481812 MAST1Q9Y2H9 1570 aa31.54■■■□□ 2.64
VPS16-207ENST00000481812 RTEL1-TNFRSF6BF6WH68 1400 aa31.53■■■□□ 2.64
VPS16-207ENST00000481812 HECW2Q9P2P5 1572 aa31.51■■■□□ 2.63
VPS16-207ENST00000481812 SPAG9O60271 1321 aaKnown RBP31.5■■■□□ 2.63
VPS16-207ENST00000481812 INO80Q9ULG1 1556 aaPredicted RBP31.49■■■□□ 2.63
VPS16-207ENST00000481812 KIDINS220Q9ULH0 1771 aa31.48■■■□□ 2.63
VPS16-207ENST00000481812 C9orf84Q5VXU9 1444 aa31.47■■■□□ 2.63
VPS16-207ENST00000481812 ATP7AQ04656 1500 aa31.46■■■□□ 2.63
VPS16-207ENST00000481812 ZFYVE16Q7Z3T8 1539 aa31.45■■■□□ 2.63
VPS16-207ENST00000481812 PTPRKQ15262 1439 aa31.43■■■□□ 2.62
VPS16-207ENST00000481812 ADGBQ8N7X0 1667 aa31.42■■■□□ 2.62
VPS16-207ENST00000481812 ADGRL2O95490 1459 aa31.42■■■□□ 2.62
VPS16-207ENST00000481812 TRIM26Q12899 539 aaPredicted RBP31.41■■■□□ 2.62
VPS16-207ENST00000481812 PLXNC1O60486 1568 aa31.4■■■□□ 2.62
VPS16-207ENST00000481812 ROCK1Q13464 1354 aa31.39■■■□□ 2.62
VPS16-207ENST00000481812 ITGAEP38570 1179 aa31.37■■■□□ 2.61
VPS16-207ENST00000481812 ANKRD30AQ9BXX3 1397 aa31.37■■■□□ 2.61
VPS16-207ENST00000481812 ARHGEF40Q8TER5 1519 aa31.37■■■□□ 2.61
VPS16-207ENST00000481812 NCOA1Q15788 1441 aa31.36■■■□□ 2.61
VPS16-207ENST00000481812 MYT1LQ9UL68 1186 aa31.36■■■□□ 2.61
VPS16-207ENST00000481812 ABCA6Q8N139 1617 aa31.35■■■□□ 2.61
VPS16-207ENST00000481812 DIP2CQ9Y2E4 1556 aa31.35■■■□□ 2.61
VPS16-207ENST00000481812 YEATS2Q9ULM3 1422 aa31.35■■■□□ 2.61
VPS16-207ENST00000481812 CHIC2Q9UKJ5 165 aa31.34■■■□□ 2.61
VPS16-207ENST00000481812 ATP10AO60312 1499 aa31.32■■■□□ 2.6
VPS16-207ENST00000481812 REREQ9P2R6 1566 aa31.31■■■□□ 2.6
VPS16-207ENST00000481812 DUOX2Q9NRD8 1548 aa31.27■■■□□ 2.6
VPS16-207ENST00000481812 KIF15Q9NS87 1388 aa31.27■■■□□ 2.6
VPS16-207ENST00000481812 DHX29Q7Z478 1369 aaKnown RBP31.25■■■□□ 2.59
VPS16-207ENST00000481812 A2MP01023 1474 aa31.25■■■□□ 2.59
VPS16-207ENST00000481812 RRP7BPQ9NSQ0 103 aa31.24■■■□□ 2.59
VPS16-207ENST00000481812 HFM1A2PYH4 1435 aa31.21■■■□□ 2.59
VPS16-207ENST00000481812 GCC2Q8IWJ2 1684 aa31.2■■■□□ 2.59
VPS16-207ENST00000481812 AGLP35573 1532 aa31.19■■■□□ 2.58
VPS16-207ENST00000481812 ERBINQ96RT1 1412 aa31.19■■■□□ 2.58
VPS16-207ENST00000481812 NAIPQ13075 1403 aa31.18■■■□□ 2.58
VPS16-207ENST00000481812 EIF2AK4Q9P2K8 1649 aaKnown RBP31.16■■■□□ 2.58
VPS16-207ENST00000481812 BCORL1Q5H9F3 1711 aa31.16■■■□□ 2.58
VPS16-207ENST00000481812 ANKRD50Q9ULJ7 1429 aa31.15■■■□□ 2.58
VPS16-207ENST00000481812 SIGLEC1Q9BZZ2 1709 aa31.12■■■□□ 2.57
VPS16-207ENST00000481812 SETD5Q9C0A6 1442 aa31.07■■■□□ 2.57
VPS16-207ENST00000481812 KIF3BO15066 747 aa31.04■■■□□ 2.56
VPS16-207ENST00000481812 RNF17Q9BXT8 1623 aaKnown RBP31.04■■■□□ 2.56
VPS16-207ENST00000481812 ACIN1Q9UKV3 1341 aaKnown RBP31.03■■■□□ 2.56
VPS16-207ENST00000481812 DEPDC5O75140 1603 aa31.02■■■□□ 2.56
VPS16-207ENST00000481812 HRCP23327 699 aa31.01■■■□□ 2.55
VPS16-207ENST00000481812 ARID4BQ4LE39 1312 aaPredicted RBP31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms