RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 BECN1Q14457 450 aa14.92□□□□□ -0.02
TRIM27-205ENST00000481474 CEP89Q96ST8 783 aa14.92□□□□□ -0.02
TRIM27-205ENST00000481474 TCEAL9Q9UHQ7 104 aa14.91□□□□□ -0.02
TRIM27-205ENST00000481474 L1TD1Q5T7N2 865 aaKnown RBP14.91□□□□□ -0.02
TRIM27-205ENST00000481474 PES1O00541 588 aaKnown RBP14.91□□□□□ -0.02
TRIM27-205ENST00000481474 CHAF1AQ13111 956 aaPredicted RBP14.91□□□□□ -0.02
TRIM27-205ENST00000481474 CFAP44Q96MT7 982 aa14.9□□□□□ -0.02
TRIM27-205ENST00000481474 PAF1Q8N7H5 531 aa14.9□□□□□ -0.02
TRIM27-205ENST00000481474 NUTM2FA1L443 756 aa14.89□□□□□ -0.03
TRIM27-205ENST00000481474 CFAP53Q96M91 514 aa14.89□□□□□ -0.03
TRIM27-205ENST00000481474 ANP32EQ9BTT0 268 aa14.88□□□□□ -0.03
TRIM27-205ENST00000481474 RRP7BPQ9NSQ0 103 aa14.88□□□□□ -0.03
TRIM27-205ENST00000481474 AK7Q96M32 723 aa14.88□□□□□ -0.03
TRIM27-205ENST00000481474 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.88□□□□□ -0.033e-9■■■■■ 59.9
TRIM27-205ENST00000481474 SLC4A3P48751 1232 aa14.85□□□□□ -0.03
TRIM27-205ENST00000481474 SYTL4Q96C24 671 aaPredicted RBP14.85□□□□□ -0.03
TRIM27-205ENST00000481474 LTV1Q96GA3 475 aaPredicted RBP14.85□□□□□ -0.03
TRIM27-205ENST00000481474 ACIN1Q9UKV3 1341 aaKnown RBP14.85□□□□□ -0.03
TRIM27-205ENST00000481474 CC2D1BQ5T0F9 858 aaKnown RBP14.84□□□□□ -0.03
TRIM27-205ENST00000481474 TRIM34Q9BYJ4 488 aa14.84□□□□□ -0.03
TRIM27-205ENST00000481474 NRDCO43847 1150 aa14.83□□□□□ -0.03
TRIM27-205ENST00000481474 SRPK2P78362 688 aaKnown RBP14.82□□□□□ -0.04
TRIM27-205ENST00000481474 RTF1Q92541 710 aaKnown RBP14.81□□□□□ -0.04
TRIM27-205ENST00000481474 NGEFQ8N5V2 710 aa14.81□□□□□ -0.04
TRIM27-205ENST00000481474 NOL8Q76FK4 1167 aaKnown RBP14.8□□□□□ -0.04
TRIM27-205ENST00000481474 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.79□□□□□ -0.04
TRIM27-205ENST00000481474 EVA1CP58658 441 aa14.79□□□□□ -0.04
TRIM27-205ENST00000481474 KNSTRNQ9Y448 316 aa14.78□□□□□ -0.04
TRIM27-205ENST00000481474 PLCD3Q8N3E9 789 aa14.76□□□□□ -0.05
TRIM27-205ENST00000481474 TNNT3P45378 269 aaPredicted RBP14.75□□□□□ -0.05
TRIM27-205ENST00000481474 CCAR1Q8IX12 1150 aaKnown RBP14.75□□□□□ -0.05
TRIM27-205ENST00000481474 MTMR7Q9Y216 660 aa14.73□□□□□ -0.05
TRIM27-205ENST00000481474 PAXIP1Q6ZW49 1069 aaPredicted RBP14.72□□□□□ -0.05
TRIM27-205ENST00000481474 NUTM2DQ5VT03 806 aaPredicted RBP14.72□□□□□ -0.05
TRIM27-205ENST00000481474 NUDCQ9Y266 331 aa14.72□□□□□ -0.05
TRIM27-205ENST00000481474 DHX16O60231 1041 aaKnown RBP14.72□□□□□ -0.05
TRIM27-205ENST00000481474 B4GALNT3Q6L9W6 998 aa14.71□□□□□ -0.05
TRIM27-205ENST00000481474 MYCNP04198 464 aaPredicted RBP14.71□□□□□ -0.06
TRIM27-205ENST00000481474 KIAA1211Q6ZU35 1233 aa14.7□□□□□ -0.06
TRIM27-205ENST00000481474 CCDC97Q96F63 343 aaPredicted RBP14.7□□□□□ -0.06
TRIM27-205ENST00000481474 FOXD4L5Q5VV16 416 aaPredicted RBP14.7□□□□□ -0.06
TRIM27-205ENST00000481474 FOXD4L4Q8WXT5 416 aaPredicted RBP14.7□□□□□ -0.06
TRIM27-205ENST00000481474 TMEM132AQ24JP5 1023 aa14.68□□□□□ -0.06
TRIM27-205ENST00000481474 GGT6Q6P531 493 aa14.67□□□□□ -0.06
TRIM27-205ENST00000481474 SLC4A10Q6U841 1118 aa14.66□□□□□ -0.06
TRIM27-205ENST00000481474 TRIM6-TRIM34B2RNG4 842 aa14.65□□□□□ -0.06
TRIM27-205ENST00000481474 FOXD4L1Q9NU39 408 aa14.65□□□□□ -0.06
TRIM27-205ENST00000481474 CHMP4BP1P59074 171 aa14.65□□□□□ -0.06
TRIM27-205ENST00000481474 CALRP27797 417 aaKnown RBP14.64□□□□□ -0.07
TRIM27-205ENST00000481474 DDRGK1Q96HY6 314 aa14.64□□□□□ -0.07
TRIM27-205ENST00000481474 GZF1Q9H116 711 aaPredicted RBP14.64□□□□□ -0.07
TRIM27-205ENST00000481474 KDM4AO75164 1064 aa14.64□□□□□ -0.07
TRIM27-205ENST00000481474 ZFYVE27Q5T4F4 411 aa14.64□□□□□ -0.07
TRIM27-205ENST00000481474 CCAR2Q8N163 923 aaKnown RBP14.64□□□□□ -0.07
TRIM27-205ENST00000481474 FYB1O15117 783 aa14.64□□□□□ -0.07
TRIM27-205ENST00000481474 TPD52L1Q16890 204 aaPredicted RBP14.64□□□□□ -0.07
TRIM27-205ENST00000481474 MCCP23508 829 aa14.63□□□□□ -0.07
TRIM27-205ENST00000481474 FOXD4L6Q3SYB3 417 aaPredicted RBP14.63□□□□□ -0.07
TRIM27-205ENST00000481474 FOXD4L3Q6VB84 417 aaPredicted RBP14.63□□□□□ -0.07
TRIM27-205ENST00000481474 BCL11BQ9C0K0 894 aaPredicted RBP14.63□□□□□ -0.07
TRIM27-205ENST00000481474 CCDC43Q96MW1 224 aaKnown RBP14.62□□□□□ -0.07
TRIM27-205ENST00000481474 SPDYE4A6NLX3 237 aa14.62□□□□□ -0.07
TRIM27-205ENST00000481474 PCMTD1Q96MG8 357 aaPredicted RBP14.61□□□□□ -0.07
TRIM27-205ENST00000481474 MSNP26038 577 aaKnown RBP14.6□□□□□ -0.07
TRIM27-205ENST00000481474 PPP4R2Q9NY27 417 aa14.59□□□□□ -0.07
TRIM27-205ENST00000481474 VPS37DQ86XT2 251 aa14.58□□□□□ -0.08
TRIM27-205ENST00000481474 GRM1Q13255 1194 aa14.58□□□□□ -0.08
TRIM27-205ENST00000481474 GOLGA6L1Q8N7Z2 621 aa14.58□□□□□ -0.08
TRIM27-205ENST00000481474 PLEKHD1A6NEE1 506 aa14.57□□□□□ -0.08
TRIM27-205ENST00000481474 FAM177BA6PVY3 158 aa14.57□□□□□ -0.08
TRIM27-205ENST00000481474 SF3B2Q13435 895 aaKnown RBP14.57□□□□□ -0.08
TRIM27-205ENST00000481474 CARD11Q9BXL7 1154 aa14.57□□□□□ -0.08
TRIM27-205ENST00000481474 R3HCC1Q9Y3T6 440 aaKnown RBP14.57□□□□□ -0.08
TRIM27-205ENST00000481474 IKQ13123 557 aaPredicted RBP14.57□□□□□ -0.08
TRIM27-205ENST00000481474 PTMSP20962 102 aa14.56□□□□□ -0.08
TRIM27-205ENST00000481474 HSCBQ8IWL3 235 aa14.56□□□□□ -0.08
TRIM27-205ENST00000481474 NOL10Q9BSC4 688 aaKnown RBP14.56□□□□□ -0.08
TRIM27-205ENST00000481474 SKIDA1Q1XH10 827 aa14.56□□□□□ -0.08
TRIM27-205ENST00000481474 DHX37Q8IY37 1157 aaKnown RBP14.56□□□□□ -0.08
TRIM27-205ENST00000481474 NGDNQ8NEJ9 315 aaKnown RBP14.54□□□□□ -0.08
TRIM27-205ENST00000481474 FOSBP53539 338 aa14.54□□□□□ -0.08
TRIM27-205ENST00000481474 ODF2Q5BJF6 829 aa14.53□□□□□ -0.08
TRIM27-205ENST00000481474 MTUS2Q5JR59 1369 aa14.53□□□□□ -0.08
TRIM27-205ENST00000481474 NECTIN2Q92692 538 aa14.52□□□□□ -0.08
TRIM27-205ENST00000481474 USP35Q9P2H5 1018 aa14.52□□□□□ -0.08
TRIM27-205ENST00000481474 ZNF428Q96B54 188 aa14.52□□□□□ -0.09
TRIM27-205ENST00000481474 TPM3P06753 285 aa14.52□□□□□ -0.09
TRIM27-205ENST00000481474 SF3A1Q15459 793 aaKnown RBP14.52□□□□□ -0.09
TRIM27-205ENST00000481474 APPP05067 770 aa14.51□□□□□ -0.09
TRIM27-205ENST00000481474 HDGFP51858 240 aaKnown RBP14.51□□□□□ -0.09
TRIM27-205ENST00000481474 TPM4P67936 248 aa14.51□□□□□ -0.09
TRIM27-205ENST00000481474 CT47A1Q5JQC4 288 aaPredicted RBP14.51□□□□□ -0.09
TRIM27-205ENST00000481474 AKAP17AQ02040 695 aaKnown RBP14.5□□□□□ -0.09
TRIM27-205ENST00000481474 NUTM2BA6NNL0 878 aaPredicted RBP14.5□□□□□ -0.09
TRIM27-205ENST00000481474 NUTM2EB1AL46 878 aaPredicted RBP14.5□□□□□ -0.09
TRIM27-205ENST00000481474 NUTM2AQ8IVF1 878 aaPredicted RBP14.5□□□□□ -0.09
TRIM27-205ENST00000481474 ECM2O94769 699 aaPredicted RBP14.49□□□□□ -0.09
TRIM27-205ENST00000481474 MORC1Q86VD1 984 aa14.49□□□□□ -0.09
TRIM27-205ENST00000481474 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.49□□□□□ -0.09
TRIM27-205ENST00000481474 PODXL2Q9NZ53 605 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms