RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 C2orf72A6NCS6 295 aa11.28□□□□□ -0.6
CHCHD3-205ENST00000481152 HOXB3P14651 431 aaPredicted RBP11.28□□□□□ -0.6
CHCHD3-205ENST00000481152 POTEMA6NI47 508 aa11.26□□□□□ -0.61
CHCHD3-205ENST00000481152 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
CHCHD3-205ENST00000481152 TMC2Q8TDI7 906 aa11.26□□□□□ -0.61
CHCHD3-205ENST00000481152 DOK7Q18PE1 504 aa11.25□□□□□ -0.61
CHCHD3-205ENST00000481152 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.22□□□□□ -0.61
CHCHD3-205ENST00000481152 ZNF710Q8N1W2 664 aa11.21□□□□□ -0.61
CHCHD3-205ENST00000481152 RIMBP2O15034 1052 aa11.19□□□□□ -0.62
CHCHD3-205ENST00000481152 GPHNQ9NQX3 736 aaPredicted RBP11.19□□□□□ -0.62
CHCHD3-205ENST00000481152 SPRYD3Q8NCJ5 442 aa11.18□□□□□ -0.62
CHCHD3-205ENST00000481152 MARVELD3Q96A59 401 aa11.17□□□□□ -0.62
CHCHD3-205ENST00000481152 FOXK1P85037 733 aa11.16□□□□□ -0.62
CHCHD3-205ENST00000481152 CRISPLD2Q9H0B8 497 aa11.16□□□□□ -0.62
CHCHD3-205ENST00000481152 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
CHCHD3-205ENST00000481152 HOXB1P14653 301 aaPredicted RBP11.15□□□□□ -0.63
CHCHD3-205ENST00000481152 EMP3P54852 163 aa11.14□□□□□ -0.63
CHCHD3-205ENST00000481152 DSG2Q14126 1118 aa11.14□□□□□ -0.63
CHCHD3-205ENST00000481152 PAXIP1Q6ZW49 1069 aaPredicted RBP11.14□□□□□ -0.63
CHCHD3-205ENST00000481152 NCKAP5LQ9HCH0 1330 aa11.14□□□□□ -0.63
CHCHD3-205ENST00000481152 PLPP6Q8IY26 295 aa11.12□□□□□ -0.63
CHCHD3-205ENST00000481152 CFAP44Q96MT7 982 aa11.12□□□□□ -0.63
CHCHD3-205ENST00000481152 SLC34A2O95436 690 aa11.11□□□□□ -0.63
CHCHD3-205ENST00000481152 PDE4AP27815 886 aa11.11□□□□□ -0.63
CHCHD3-205ENST00000481152 GPR153Q6NV75 609 aa11.11□□□□□ -0.63
CHCHD3-205ENST00000481152 CADPS2Q86UW7 1296 aa11.11□□□□□ -0.63
CHCHD3-205ENST00000481152 ARSIQ5FYB1 569 aa11.09□□□□□ -0.63
CHCHD3-205ENST00000481152 PPP1R15BQ5SWA1 713 aa11.07□□□□□ -0.64
CHCHD3-205ENST00000481152 LARP6Q9BRS8 491 aaKnown RBP11.07□□□□□ -0.64
CHCHD3-205ENST00000481152 FAM205CA6NFA0 338 aa11.05□□□□□ -0.64
CHCHD3-205ENST00000481152 KHSRPQ92945 711 aaKnown RBP eCLIP11.05□□□□□ -0.646e-7■■■□□ 18
CHCHD3-205ENST00000481152 PCDH10Q9P2E7 1040 aa11.05□□□□□ -0.64
CHCHD3-205ENST00000481152 PCDHGA4Q9Y5G9 962 aa11.05□□□□□ -0.64
CHCHD3-205ENST00000481152 MFSD10Q14728 455 aa11.04□□□□□ -0.64
CHCHD3-205ENST00000481152 DDX27Q96GQ7 796 aaKnown RBP11.04□□□□□ -0.64
CHCHD3-205ENST00000481152 CDAN1Q8IWY9 1227 aa11.03□□□□□ -0.64
CHCHD3-205ENST00000481152 PTCD2Q8WV60 388 aaKnown RBP11.03□□□□□ -0.64
CHCHD3-205ENST00000481152 HS3ST6Q96QI5 342 aa11.03□□□□□ -0.64
CHCHD3-205ENST00000481152 POTEB3A0JP26 581 aa11.03□□□□□ -0.64
CHCHD3-205ENST00000481152 POTEBQ6S5H4 581 aa11.03□□□□□ -0.64
CHCHD3-205ENST00000481152 ERBB3P21860 1342 aa11.02□□□□□ -0.65
CHCHD3-205ENST00000481152 NUDT7P0C024 238 aa11.01□□□□□ -0.65
CHCHD3-205ENST00000481152 VARS2Q5ST30 1063 aaKnown RBP10.98□□□□□ -0.65
CHCHD3-205ENST00000481152 OXER1Q8TDS5 423 aa10.98□□□□□ -0.65
CHCHD3-205ENST00000481152 UPF1Q92900 1129 aaKnown RBP eCLIP10.97□□□□□ -0.65
CHCHD3-205ENST00000481152 ZNF316A6NFI3 1004 aaPredicted RBP10.96□□□□□ -0.65
CHCHD3-205ENST00000481152 TBC1D12O60347 775 aa10.96□□□□□ -0.65
CHCHD3-205ENST00000481152 KDM4FA0A1W2PPD8 638 aa10.94□□□□□ -0.66
CHCHD3-205ENST00000481152 LHX6Q9UPM6 363 aa10.93□□□□□ -0.66
CHCHD3-205ENST00000481152 EMILIN3Q9NT22 766 aa10.91□□□□□ -0.66
CHCHD3-205ENST00000481152 TSHZ2Q9NRE2 1034 aa10.9□□□□□ -0.66
CHCHD3-205ENST00000481152 CAMK2BQ13554 666 aa10.9□□□□□ -0.67
CHCHD3-205ENST00000481152 ZNF687Q8N1G0 1237 aa10.89□□□□□ -0.67
CHCHD3-205ENST00000481152 KRTAP3-3Q9BYR6 98 aa10.89□□□□□ -0.67
CHCHD3-205ENST00000481152 KRTAP3-2Q9BYR7 98 aa10.89□□□□□ -0.67
CHCHD3-205ENST00000481152 PLCB2Q00722 1185 aa10.88□□□□□ -0.67
CHCHD3-205ENST00000481152 MAP3K9P80192 1104 aa10.86□□□□□ -0.67
CHCHD3-205ENST00000481152 PSDA5PKW4 1024 aaPredicted RBP10.85□□□□□ -0.67
CHCHD3-205ENST00000481152 EVI5O60447 810 aa10.84□□□□□ -0.67
CHCHD3-205ENST00000481152 PLSCR2Q9NRY7 297 aa10.84□□□□□ -0.67
CHCHD3-205ENST00000481152 WDR70Q9NW82 654 aa10.84□□□□□ -0.67
CHCHD3-205ENST00000481152 ANO8Q9HCE9 1232 aaPredicted RBP10.82□□□□□ -0.68
CHCHD3-205ENST00000481152 DPYSL4O14531 572 aa10.8□□□□□ -0.68
CHCHD3-205ENST00000481152 E2F4Q16254 413 aa10.8□□□□□ -0.68
CHCHD3-205ENST00000481152 PPP4R3BQ5MIZ7 849 aa10.79□□□□□ -0.68
CHCHD3-205ENST00000481152 PBX2P40425 430 aa10.78□□□□□ -0.68
CHCHD3-205ENST00000481152 POTEEQ6S8J3 1075 aa10.77□□□□□ -0.68
CHCHD3-205ENST00000481152 ZNF454Q8N9F8 522 aa10.77□□□□□ -0.68
CHCHD3-205ENST00000481152 FOSBP53539 338 aa10.77□□□□□ -0.69
CHCHD3-205ENST00000481152 SPNS2Q8IVW8 549 aa10.76□□□□□ -0.69
CHCHD3-205ENST00000481152 JPH4Q96JJ6 628 aa10.76□□□□□ -0.69
CHCHD3-205ENST00000481152 AXIN2Q9Y2T1 843 aa10.75□□□□□ -0.69
CHCHD3-205ENST00000481152 LSM11P83369 360 aaKnown RBP eCLIP10.74□□□□□ -0.69
CHCHD3-205ENST00000481152 SLC24A1O60721 1099 aa10.73□□□□□ -0.69
CHCHD3-205ENST00000481152 ARIH1Q9Y4X5 557 aaPredicted RBP10.73□□□□□ -0.69
CHCHD3-205ENST00000481152 ARHGAP33O14559 1287 aa10.72□□□□□ -0.69
CHCHD3-205ENST00000481152 PDIA6Q15084 440 aa10.72□□□□□ -0.69
CHCHD3-205ENST00000481152 HAP1P54257 671 aaPredicted RBP10.7□□□□□ -0.7
CHCHD3-205ENST00000481152 ANKRD13DQ6ZTN6 518 aa10.7□□□□□ -0.7
CHCHD3-205ENST00000481152 SPDYE16A6NNV3 312 aaPredicted RBP10.69□□□□□ -0.7
CHCHD3-205ENST00000481152 PSEN2P49810 448 aa10.69□□□□□ -0.7
CHCHD3-205ENST00000481152 ZDHHC16Q969W1 377 aa10.69□□□□□ -0.7
CHCHD3-205ENST00000481152 KCNK17Q96T54 332 aa10.69□□□□□ -0.7
CHCHD3-205ENST00000481152 BCL2L12Q9HB09 334 aa10.69□□□□□ -0.7
CHCHD3-205ENST00000481152 PCDHGA10Q9Y5H3 936 aa10.69□□□□□ -0.7
CHCHD3-205ENST00000481152 PHF14O94880 888 aa10.67□□□□□ -0.7
CHCHD3-205ENST00000481152 PTGER2P43116 358 aa10.67□□□□□ -0.7
CHCHD3-205ENST00000481152 MMRN1Q13201 1228 aa10.67□□□□□ -0.7
CHCHD3-205ENST00000481152 ADAM33Q9BZ11 813 aa10.67□□□□□ -0.7
CHCHD3-205ENST00000481152 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
CHCHD3-205ENST00000481152 KCNH8Q96L42 1107 aa10.66□□□□□ -0.7
CHCHD3-205ENST00000481152 DMRTA1Q5VZB9 504 aa10.65□□□□□ -0.7
CHCHD3-205ENST00000481152 TYW1BQ6NUM6 668 aa10.65□□□□□ -0.7
CHCHD3-205ENST00000481152 DDX12PQ92771 950 aa10.65□□□□□ -0.7
CHCHD3-205ENST00000481152 FBXW7Q969H0 707 aa10.65□□□□□ -0.71
CHCHD3-205ENST00000481152 PTPREP23469 700 aa10.64□□□□□ -0.71
CHCHD3-205ENST00000481152 EPAS1Q99814 870 aa10.64□□□□□ -0.71
CHCHD3-205ENST00000481152 ARHGEF1Q92888 912 aaKnown RBP10.63□□□□□ -0.71
CHCHD3-205ENST00000481152 ADGRD1Q6QNK2 874 aa10.62□□□□□ -0.71
CHCHD3-205ENST00000481152 TK2O00142 265 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms