RNA–Protein interactions for RNA: ENST00000481070.1

KCNMA1-220, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 2 BASIC

Gene KCNMA1, Length 896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-220ENST00000481070 GPATCH8Q9UKJ3 1502 aaKnown RBP29.58■■■□□ 2.33
KCNMA1-220ENST00000481070 CDC42BPAQ5VT25 1732 aa29.57■■■□□ 2.32
KCNMA1-220ENST00000481070 CD109Q6YHK3 1445 aa29.57■■■□□ 2.32
KCNMA1-220ENST00000481070 MYO5CQ9NQX4 1742 aa29.56■■■□□ 2.32
KCNMA1-220ENST00000481070 MYOM3Q5VTT5 1437 aa29.54■■■□□ 2.32
KCNMA1-220ENST00000481070 CFDP1Q9UEE9 299 aaPredicted RBP29.53■■■□□ 2.32
KCNMA1-220ENST00000481070 ZNF777Q9ULD5 760 aaPredicted RBP29.53■■■□□ 2.32
KCNMA1-220ENST00000481070 PLCH2O75038 1416 aa29.52■■■□□ 2.32
KCNMA1-220ENST00000481070 CDC42BPBQ9Y5S2 1711 aa29.51■■■□□ 2.32
KCNMA1-220ENST00000481070 ITSN2Q9NZM3 1697 aa29.51■■■□□ 2.31
KCNMA1-220ENST00000481070 PREX2Q70Z35 1606 aa29.51■■■□□ 2.31
KCNMA1-220ENST00000481070 ARHGAP5Q13017 1502 aa29.5■■■□□ 2.31
KCNMA1-220ENST00000481070 FGD6Q6ZV73 1430 aa29.46■■■□□ 2.31
KCNMA1-220ENST00000481070 ZNF644Q9H582 1327 aaPredicted RBP29.45■■■□□ 2.31
KCNMA1-220ENST00000481070 FAM50AQ14320 339 aaKnown RBP29.43■■■□□ 2.3
KCNMA1-220ENST00000481070 EFCAB2Q5VUJ9 269 aa29.43■■■□□ 2.3
KCNMA1-220ENST00000481070 FANCAO15360 1455 aa29.42■■■□□ 2.3
KCNMA1-220ENST00000481070 MIA2Q96PC5 1412 aa29.4■■■□□ 2.3
KCNMA1-220ENST00000481070 PTPN23Q9H3S7 1636 aa29.4■■■□□ 2.3
KCNMA1-220ENST00000481070 ARAP3Q8WWN8 1544 aa29.38■■■□□ 2.29
KCNMA1-220ENST00000481070 SAMD9LQ8IVG5 1584 aa29.37■■■□□ 2.29
KCNMA1-220ENST00000481070 CAMSAP2Q08AD1 1489 aa29.36■■■□□ 2.29
KCNMA1-220ENST00000481070 RRBP1Q9P2E9 1410 aaKnown RBP29.36■■■□□ 2.29
KCNMA1-220ENST00000481070 AKNAQ7Z591 1439 aa29.33■■■□□ 2.29
KCNMA1-220ENST00000481070 HNRNPMP52272 730 aaKnown RBP eCLIP29.32■■■□□ 2.28
KCNMA1-220ENST00000481070 CFAP74Q9C0B2 1584 aa29.31■■■□□ 2.28
KCNMA1-220ENST00000481070 TCOF1Q13428 1488 aaKnown RBP29.3■■■□□ 2.28
KCNMA1-220ENST00000481070 ITGAEP38570 1179 aa29.3■■■□□ 2.28
KCNMA1-220ENST00000481070 NEO1Q92859 1461 aa29.29■■■□□ 2.28
KCNMA1-220ENST00000481070 SYCP2Q9BX26 1530 aa29.27■■■□□ 2.28
KCNMA1-220ENST00000481070 ABCC1P33527 1531 aa29.26■■■□□ 2.27
KCNMA1-220ENST00000481070 SCAPERQ9BY12 1400 aa29.26■■■□□ 2.27
KCNMA1-220ENST00000481070 ARHGEF12Q9NZN5 1544 aa29.25■■■□□ 2.27
KCNMA1-220ENST00000481070 TRIM26Q12899 539 aaPredicted RBP29.23■■■□□ 2.27
KCNMA1-220ENST00000481070 PLEKHH2Q8IVE3 1493 aa29.23■■■□□ 2.27
KCNMA1-220ENST00000481070 ADAMTSL3P82987 1691 aa29.22■■■□□ 2.27
KCNMA1-220ENST00000481070 KIAA1107Q9UPP5 1409 aa29.2■■■□□ 2.26
KCNMA1-220ENST00000481070 TRAPPC8Q9Y2L5 1435 aa29.2■■■□□ 2.26
KCNMA1-220ENST00000481070 MBD5Q9P267 1494 aa29.18■■■□□ 2.26
KCNMA1-220ENST00000481070 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.18■■■□□ 2.26
KCNMA1-220ENST00000481070 PTPRMP28827 1452 aa29.17■■■□□ 2.26
KCNMA1-220ENST00000481070 RAPGEF3O95398 923 aa29.17■■■□□ 2.26
KCNMA1-220ENST00000481070 AFAP1Q8N556 730 aa29.17■■■□□ 2.26
KCNMA1-220ENST00000481070 ABCC5O15440 1437 aa29.15■■■□□ 2.26
KCNMA1-220ENST00000481070 DAPK1P53355 1430 aa29.15■■■□□ 2.26
KCNMA1-220ENST00000481070 CHIC2Q9UKJ5 165 aa29.15■■■□□ 2.26
KCNMA1-220ENST00000481070 DNMT1P26358 1616 aaKnown RBP29.15■■■□□ 2.26
KCNMA1-220ENST00000481070 DENND4BO75064 1496 aaPredicted RBP29.15■■■□□ 2.26
KCNMA1-220ENST00000481070 LMTK3Q96Q04 1460 aa29.14■■■□□ 2.26
KCNMA1-220ENST00000481070 ARHGEF5Q12774 1597 aa29.13■■■□□ 2.25
KCNMA1-220ENST00000481070 CCDC141Q6ZP82 1450 aa29.13■■■□□ 2.25
KCNMA1-220ENST00000481070 PTPRKQ15262 1439 aa29.11■■■□□ 2.25
KCNMA1-220ENST00000481070 POGZQ7Z3K3 1410 aa29.11■■■□□ 2.25
KCNMA1-220ENST00000481070 MYT1LQ9UL68 1186 aa29.1■■■□□ 2.25
KCNMA1-220ENST00000481070 TSPY4P0CV99 314 aa29.09■■■□□ 2.25
KCNMA1-220ENST00000481070 TSPY10P0CW01 314 aa29.09■■■□□ 2.25
KCNMA1-220ENST00000481070 RSPH4AQ5TD94 716 aa29.09■■■□□ 2.25
KCNMA1-220ENST00000481070 CROCC2H7BZ55 1655 aa29.07■■■□□ 2.24
KCNMA1-220ENST00000481070 ZNF518AQ6AHZ1 1483 aa29.07■■■□□ 2.24
KCNMA1-220ENST00000481070 PCGF6Q9BYE7 350 aa29.07■■■□□ 2.24
KCNMA1-220ENST00000481070 BCORL1Q5H9F3 1711 aa29.06■■■□□ 2.24
KCNMA1-220ENST00000481070 RICTORQ6R327 1708 aa29.06■■■□□ 2.24
KCNMA1-220ENST00000481070 FRMPD1Q5SYB0 1578 aa29.05■■■□□ 2.24
KCNMA1-220ENST00000481070 SPAG9O60271 1321 aaKnown RBP29.04■■■□□ 2.24
KCNMA1-220ENST00000481070 C9orf84Q5VXU9 1444 aa29.03■■■□□ 2.24
KCNMA1-220ENST00000481070 MADDQ8WXG6 1647 aa29.02■■■□□ 2.24
KCNMA1-220ENST00000481070 RRP7BPQ9NSQ0 103 aa28.99■■■□□ 2.23
KCNMA1-220ENST00000481070 KDM5CP41229 1560 aa28.99■■■□□ 2.23
KCNMA1-220ENST00000481070 SHANK2Q9UPX8 1470 aa28.98■■■□□ 2.23
KCNMA1-220ENST00000481070 MAST1Q9Y2H9 1570 aa28.96■■■□□ 2.23
KCNMA1-220ENST00000481070 ADGBQ8N7X0 1667 aa28.95■■■□□ 2.22
KCNMA1-220ENST00000481070 ATP7AQ04656 1500 aa28.94■■■□□ 2.22
KCNMA1-220ENST00000481070 ZFYVE16Q7Z3T8 1539 aa28.94■■■□□ 2.22
KCNMA1-220ENST00000481070 INO80Q9ULG1 1556 aaPredicted RBP28.93■■■□□ 2.22
KCNMA1-220ENST00000481070 KIDINS220Q9ULH0 1771 aa28.93■■■□□ 2.22
KCNMA1-220ENST00000481070 ANKRD30AQ9BXX3 1397 aa28.92■■■□□ 2.22
KCNMA1-220ENST00000481070 MLH3Q9UHC1 1453 aa28.91■■■□□ 2.22
KCNMA1-220ENST00000481070 RTEL1-TNFRSF6BF6WH68 1400 aa28.91■■■□□ 2.22
KCNMA1-220ENST00000481070 ZMYM4Q5VZL5 1548 aa28.9■■■□□ 2.22
KCNMA1-220ENST00000481070 RIMS1Q86UR5 1692 aaKnown RBP28.9■■■□□ 2.22
KCNMA1-220ENST00000481070 YEATS2Q9ULM3 1422 aa28.9■■■□□ 2.22
KCNMA1-220ENST00000481070 NCOA1Q15788 1441 aa28.89■■■□□ 2.22
KCNMA1-220ENST00000481070 ADGRL2O95490 1459 aa28.89■■■□□ 2.22
KCNMA1-220ENST00000481070 ROCK1Q13464 1354 aa28.88■■■□□ 2.21
KCNMA1-220ENST00000481070 KIF15Q9NS87 1388 aa28.87■■■□□ 2.21
KCNMA1-220ENST00000481070 ABCA6Q8N139 1617 aa28.86■■■□□ 2.21
KCNMA1-220ENST00000481070 PLXNC1O60486 1568 aa28.84■■■□□ 2.21
KCNMA1-220ENST00000481070 MAGI2Q86UL8 1455 aa28.82■■■□□ 2.2
KCNMA1-220ENST00000481070 DIP2CQ9Y2E4 1556 aa28.82■■■□□ 2.2
KCNMA1-220ENST00000481070 ARHGEF40Q8TER5 1519 aa28.8■■■□□ 2.2
KCNMA1-220ENST00000481070 NAIPQ13075 1403 aa28.8■■■□□ 2.2
KCNMA1-220ENST00000481070 SOCS7O14512 581 aa28.8■■■□□ 2.2
KCNMA1-220ENST00000481070 HFM1A2PYH4 1435 aa28.79■■■□□ 2.2
KCNMA1-220ENST00000481070 CERKQ8TCT0 537 aa28.77■■■□□ 2.2
KCNMA1-220ENST00000481070 GCC2Q8IWJ2 1684 aa28.77■■■□□ 2.2
KCNMA1-220ENST00000481070 DUOX2Q9NRD8 1548 aa28.76■■■□□ 2.19
KCNMA1-220ENST00000481070 ILDR2Q71H61 639 aa28.76■■■□□ 2.19
KCNMA1-220ENST00000481070 A2MP01023 1474 aa28.76■■■□□ 2.19
KCNMA1-220ENST00000481070 SETD5Q9C0A6 1442 aa28.76■■■□□ 2.19
KCNMA1-220ENST00000481070 ATP10AO60312 1499 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms