RNA–Protein interactions for RNA: ENST00000480713.1

NDUFA3-211, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2

Gene NDUFA3, Length 282 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-211ENST00000480713 AFAP1Q8N556 730 aa11.28□□□□□ -0.6
NDUFA3-211ENST00000480713 EFCAB5A4FU69 1503 aa11.28□□□□□ -0.6
NDUFA3-211ENST00000480713 RIMS1Q86UR5 1692 aaKnown RBP11.27□□□□□ -0.6
NDUFA3-211ENST00000480713 UBTFP17480 764 aaKnown RBP11.27□□□□□ -0.61
NDUFA3-211ENST00000480713 DMRT2Q9Y5R5 561 aa11.27□□□□□ -0.61
NDUFA3-211ENST00000480713 TTC37Q6PGP7 1564 aa11.27□□□□□ -0.61
NDUFA3-211ENST00000480713 CFAP74Q9C0B2 1584 aa11.27□□□□□ -0.61
NDUFA3-211ENST00000480713 HECW1Q76N89 1606 aa11.27□□□□□ -0.61
NDUFA3-211ENST00000480713 CDK13Q14004 1512 aaKnown RBP11.26□□□□□ -0.61
NDUFA3-211ENST00000480713 C9orf84Q5VXU9 1444 aa11.25□□□□□ -0.61
NDUFA3-211ENST00000480713 FMN1Q68DA7 1419 aa11.25□□□□□ -0.61
NDUFA3-211ENST00000480713 SIGLEC1Q9BZZ2 1709 aa11.24□□□□□ -0.61
NDUFA3-211ENST00000480713 ARHGEF12Q9NZN5 1544 aa11.24□□□□□ -0.61
NDUFA3-211ENST00000480713 EHMT2Q96KQ7 1210 aa11.23□□□□□ -0.61
NDUFA3-211ENST00000480713 MYT1LQ9UL68 1186 aa11.21□□□□□ -0.61
NDUFA3-211ENST00000480713 ZNF518AQ6AHZ1 1483 aa11.2□□□□□ -0.62
NDUFA3-211ENST00000480713 ARHGAP35Q9NRY4 1499 aa11.2□□□□□ -0.62
NDUFA3-211ENST00000480713 TROQ12816 1431 aaPredicted RBP11.2□□□□□ -0.62
NDUFA3-211ENST00000480713 MLH3Q9UHC1 1453 aa11.18□□□□□ -0.62
NDUFA3-211ENST00000480713 UHRF1BP1Q6BDS2 1440 aa11.18□□□□□ -0.62
NDUFA3-211ENST00000480713 ESF1Q9H501 851 aaKnown RBP11.17□□□□□ -0.62
NDUFA3-211ENST00000480713 CLIP1P30622 1438 aa11.17□□□□□ -0.62
NDUFA3-211ENST00000480713 ARHGAP5Q13017 1502 aa11.16□□□□□ -0.62
NDUFA3-211ENST00000480713 ILDR2Q71H61 639 aa11.16□□□□□ -0.62
NDUFA3-211ENST00000480713 PTPRTO14522 1441 aa11.16□□□□□ -0.62
NDUFA3-211ENST00000480713 TRAPPC8Q9Y2L5 1435 aa11.16□□□□□ -0.62
NDUFA3-211ENST00000480713 FER1L4A9Z1Z3 1794 aa11.16□□□□□ -0.62
NDUFA3-211ENST00000480713 KDM5CP41229 1560 aa11.16□□□□□ -0.62
NDUFA3-211ENST00000480713 CHIC1Q5VXU3 224 aa11.15□□□□□ -0.62
NDUFA3-211ENST00000480713 KIF14Q15058 1648 aa11.14□□□□□ -0.63
NDUFA3-211ENST00000480713 REREQ9P2R6 1566 aa11.13□□□□□ -0.63
NDUFA3-211ENST00000480713 PREX1Q8TCU6 1659 aa11.13□□□□□ -0.63
NDUFA3-211ENST00000480713 AGLP35573 1532 aa11.13□□□□□ -0.63
NDUFA3-211ENST00000480713 DISP3Q9P2K9 1392 aa11.13□□□□□ -0.63
NDUFA3-211ENST00000480713 MYO5CQ9NQX4 1742 aa11.12□□□□□ -0.63
NDUFA3-211ENST00000480713 SOCS7O14512 581 aa11.12□□□□□ -0.63
NDUFA3-211ENST00000480713 STRCQ7RTU9 1775 aa11.12□□□□□ -0.63
NDUFA3-211ENST00000480713 SETD1BQ9UPS6 1966 aaKnown RBP11.12□□□□□ -0.63
NDUFA3-211ENST00000480713 DIP2CQ9Y2E4 1556 aa11.11□□□□□ -0.63
NDUFA3-211ENST00000480713 CASKIN1Q8WXD9 1431 aa11.11□□□□□ -0.63
NDUFA3-211ENST00000480713 HNRNPMP52272 730 aaKnown RBP eCLIP11.1□□□□□ -0.63
NDUFA3-211ENST00000480713 ZMYM3Q14202 1370 aa11.1□□□□□ -0.63
NDUFA3-211ENST00000480713 CNTLNQ9NXG0 1405 aa11.09□□□□□ -0.63
NDUFA3-211ENST00000480713 ZNF777Q9ULD5 760 aaPredicted RBP11.09□□□□□ -0.63
NDUFA3-211ENST00000480713 NCOA1Q15788 1441 aa11.09□□□□□ -0.63
NDUFA3-211ENST00000480713 SPAG9O60271 1321 aaKnown RBP11.09□□□□□ -0.63
NDUFA3-211ENST00000480713 NCKAP5LQ9HCH0 1330 aa11.08□□□□□ -0.64
NDUFA3-211ENST00000480713 CCDC18Q5T9S5 1454 aa11.07□□□□□ -0.64
NDUFA3-211ENST00000480713 ABCA6Q8N139 1617 aa11.07□□□□□ -0.64
NDUFA3-211ENST00000480713 LTBP4Q8N2S1 1624 aa11.07□□□□□ -0.64
NDUFA3-211ENST00000480713 ABCC1P33527 1531 aa11.07□□□□□ -0.64
NDUFA3-211ENST00000480713 NPATQ14207 1427 aa11.07□□□□□ -0.64
NDUFA3-211ENST00000480713 CDC42BPBQ9Y5S2 1711 aa11.06□□□□□ -0.64
NDUFA3-211ENST00000480713 PKD2Q13563 968 aa11.06□□□□□ -0.64
NDUFA3-211ENST00000480713 PPP6R1Q9UPN7 881 aa11.06□□□□□ -0.64
NDUFA3-211ENST00000480713 IQSEC2Q5JU85 1478 aa11.06□□□□□ -0.64
NDUFA3-211ENST00000480713 GPATCH8Q9UKJ3 1502 aaKnown RBP11.05□□□□□ -0.64
NDUFA3-211ENST00000480713 CFDP1Q9UEE9 299 aaPredicted RBP11.05□□□□□ -0.64
NDUFA3-211ENST00000480713 C3P01024 1663 aa11.04□□□□□ -0.64
NDUFA3-211ENST00000480713 KIAA1107Q9UPP5 1409 aa11.04□□□□□ -0.64
NDUFA3-211ENST00000480713 GGT6Q6P531 493 aa11.04□□□□□ -0.64
NDUFA3-211ENST00000480713 ZNF335Q9H4Z2 1342 aaPredicted RBP11.04□□□□□ -0.64
NDUFA3-211ENST00000480713 KIDINS220Q9ULH0 1771 aa11.03□□□□□ -0.64
NDUFA3-211ENST00000480713 PREX2Q70Z35 1606 aa11.03□□□□□ -0.64
NDUFA3-211ENST00000480713 LRRIQ1Q96JM4 1722 aa11.03□□□□□ -0.64
NDUFA3-211ENST00000480713 SAMD9LQ8IVG5 1584 aa11.03□□□□□ -0.64
NDUFA3-211ENST00000480713 UBAP1LF5GYI3 381 aa11.01□□□□□ -0.65
NDUFA3-211ENST00000480713 CAMSAP1Q5T5Y3 1602 aa11.01□□□□□ -0.65
NDUFA3-211ENST00000480713 PTPRKQ15262 1439 aa11.01□□□□□ -0.65
NDUFA3-211ENST00000480713 A2MP01023 1474 aa11□□□□□ -0.65
NDUFA3-211ENST00000480713 FYCO1Q9BQS8 1478 aa11□□□□□ -0.65
NDUFA3-211ENST00000480713 ITSN2Q9NZM3 1697 aa11□□□□□ -0.65
NDUFA3-211ENST00000480713 CCNB3Q8WWL7 1395 aa11□□□□□ -0.65
NDUFA3-211ENST00000480713 ZNF644Q9H582 1327 aaPredicted RBP10.99□□□□□ -0.65
NDUFA3-211ENST00000480713 PLEKHH2Q8IVE3 1493 aa10.99□□□□□ -0.65
NDUFA3-211ENST00000480713 PLA2R1Q13018 1463 aa10.98□□□□□ -0.65
NDUFA3-211ENST00000480713 TCOF1Q13428 1488 aaKnown RBP10.98□□□□□ -0.65
NDUFA3-211ENST00000480713 SYCP2Q9BX26 1530 aa10.98□□□□□ -0.65
NDUFA3-211ENST00000480713 DHX29Q7Z478 1369 aaKnown RBP10.97□□□□□ -0.65
NDUFA3-211ENST00000480713 CDC42BPAQ5VT25 1732 aa10.97□□□□□ -0.65
NDUFA3-211ENST00000480713 MROH2AA6NES4 1674 aa10.96□□□□□ -0.65
NDUFA3-211ENST00000480713 ATP7AQ04656 1500 aa10.96□□□□□ -0.65
NDUFA3-211ENST00000480713 FBXO31Q5XUX0 539 aaPredicted RBP10.96□□□□□ -0.65
NDUFA3-211ENST00000480713 MBD5Q9P267 1494 aa10.95□□□□□ -0.66
NDUFA3-211ENST00000480713 RTEL1-TNFRSF6BF6WH68 1400 aa10.95□□□□□ -0.66
NDUFA3-211ENST00000480713 MTUS2Q5JR59 1369 aa10.95□□□□□ -0.66
NDUFA3-211ENST00000480713 RSPH4AQ5TD94 716 aa10.95□□□□□ -0.66
NDUFA3-211ENST00000480713 PLXNC1O60486 1568 aa10.94□□□□□ -0.66
NDUFA3-211ENST00000480713 SPATA31D1Q6ZQQ2 1576 aa10.94□□□□□ -0.66
NDUFA3-211ENST00000480713 KIF3BO15066 747 aa10.93□□□□□ -0.66
NDUFA3-211ENST00000480713 TOM1O60784 492 aa10.93□□□□□ -0.66
NDUFA3-211ENST00000480713 A2ML1A8K2U0 1454 aa10.93□□□□□ -0.66
NDUFA3-211ENST00000480713 SUPT6HQ7KZ85 1726 aaKnown RBP10.92□□□□□ -0.66
NDUFA3-211ENST00000480713 INO80Q9ULG1 1556 aaPredicted RBP10.92□□□□□ -0.66
NDUFA3-211ENST00000480713 CEP170BQ9Y4F5 1589 aaPredicted RBP10.92□□□□□ -0.66
NDUFA3-211ENST00000480713 HSPA1LP34931 641 aa10.92□□□□□ -0.66
NDUFA3-211ENST00000480713 ANKLE2Q86XL3 938 aa10.92□□□□□ -0.66
NDUFA3-211ENST00000480713 THEMISQ8N1K5 641 aaPredicted RBP10.92□□□□□ -0.66
NDUFA3-211ENST00000480713 WASHC2CQ9Y4E1 1318 aa10.91□□□□□ -0.66
NDUFA3-211ENST00000480713 CLTCQ00610 1675 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms