RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, human

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUDCD3-208	ENST00000480209	FGD6	Q6ZV73	1430 aa		13.9	□□□□□ -0.19
NUDCD3-208	ENST00000480209	RRBP1	Q9P2E9	1410 aa	Known RBP	13.89	□□□□□ -0.19
NUDCD3-208	ENST00000480209	CCNB3	Q8WWL7	1395 aa		13.88	□□□□□ -0.19
NUDCD3-208	ENST00000480209	ARAP3	Q8WWN8	1544 aa		13.88	□□□□□ -0.19
NUDCD3-208	ENST00000480209	ARHGAP5	Q13017	1502 aa		13.87	□□□□□ -0.19
NUDCD3-208	ENST00000480209	CAMSAP2	Q08AD1	1489 aa		13.87	□□□□□ -0.19
NUDCD3-208	ENST00000480209	TCOF1	Q13428	1488 aa	Known RBP	13.87	□□□□□ -0.19
NUDCD3-208	ENST00000480209	CROCC2	H7BZ55	1655 aa		13.85	□□□□□ -0.19
NUDCD3-208	ENST00000480209	PLCH2	O75038	1416 aa		13.85	□□□□□ -0.19
NUDCD3-208	ENST00000480209	PLPPR3	Q6T4P5	718 aa		13.85	□□□□□ -0.19
NUDCD3-208	ENST00000480209	ABCC1	P33527	1531 aa		13.85	□□□□□ -0.19
NUDCD3-208	ENST00000480209	CFAP74	Q9C0B2	1584 aa		13.84	□□□□□ -0.19
NUDCD3-208	ENST00000480209	MIA2	Q96PC5	1412 aa		13.84	□□□□□ -0.19
NUDCD3-208	ENST00000480209	SYCP2	Q9BX26	1530 aa		13.83	□□□□□ -0.2
NUDCD3-208	ENST00000480209	CD109	Q6YHK3	1445 aa		13.82	□□□□□ -0.2
NUDCD3-208	ENST00000480209	DNMT1	P26358	1616 aa	Known RBP	13.82	□□□□□ -0.2
NUDCD3-208	ENST00000480209	FANCA	O15360	1455 aa		13.81	□□□□□ -0.2
NUDCD3-208	ENST00000480209	ZNF644	Q9H582	1327 aa	Predicted RBP	13.81	□□□□□ -0.2
NUDCD3-208	ENST00000480209	ARHGEF12	Q9NZN5	1544 aa		13.8	□□□□□ -0.2
NUDCD3-208	ENST00000480209	FAM69C	Q0P6D2	419 aa		13.8	□□□□□ -0.2
NUDCD3-208	ENST00000480209	ARHGEF5	Q12774	1597 aa		13.79	□□□□□ -0.2
NUDCD3-208	ENST00000480209	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.78	□□□□□ -0.2
NUDCD3-208	ENST00000480209	FRMPD1	Q5SYB0	1578 aa		13.78	□□□□□ -0.2
NUDCD3-208	ENST00000480209	RICTOR	Q6R327	1708 aa		13.78	□□□□□ -0.2
NUDCD3-208	ENST00000480209	MBD5	Q9P267	1494 aa		13.77	□□□□□ -0.21
NUDCD3-208	ENST00000480209	ADGB	Q8N7X0	1667 aa		13.76	□□□□□ -0.21
NUDCD3-208	ENST00000480209	NEO1	Q92859	1461 aa		13.76	□□□□□ -0.21
NUDCD3-208	ENST00000480209	ADGRL1	O94910	1474 aa		13.75	□□□□□ -0.21
NUDCD3-208	ENST00000480209	PTPRK	Q15262	1439 aa		13.75	□□□□□ -0.21
NUDCD3-208	ENST00000480209	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
NUDCD3-208	ENST00000480209	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.75	□□□□□ -0.21
NUDCD3-208	ENST00000480209	DAPK1	P53355	1430 aa		13.74	□□□□□ -0.21
NUDCD3-208	ENST00000480209	AKNA	Q7Z591	1439 aa		13.74	□□□□□ -0.21
NUDCD3-208	ENST00000480209	PLEKHH2	Q8IVE3	1493 aa		13.74	□□□□□ -0.21
NUDCD3-208	ENST00000480209	TEX14	Q8IWB6	1497 aa		13.74	□□□□□ -0.21
NUDCD3-208	ENST00000480209	FAM50A	Q14320	339 aa	Known RBP	13.73	□□□□□ -0.21
NUDCD3-208	ENST00000480209	INO80	Q9ULG1	1556 aa	Predicted RBP	13.73	□□□□□ -0.21
NUDCD3-208	ENST00000480209	ABCC5	O15440	1437 aa		13.73	□□□□□ -0.21
NUDCD3-208	ENST00000480209	TRAPPC8	Q9Y2L5	1435 aa		13.73	□□□□□ -0.21
NUDCD3-208	ENST00000480209	KDM5C	P41229	1560 aa		13.72	□□□□□ -0.21
NUDCD3-208	ENST00000480209	MAST1	Q9Y2H9	1570 aa		13.72	□□□□□ -0.21
NUDCD3-208	ENST00000480209	TRIM26	Q12899	539 aa	Predicted RBP	13.72	□□□□□ -0.21
NUDCD3-208	ENST00000480209	EFCAB2	Q5VUJ9	269 aa		13.72	□□□□□ -0.21
NUDCD3-208	ENST00000480209	CCDC141	Q6ZP82	1450 aa		13.72	□□□□□ -0.21
NUDCD3-208	ENST00000480209	KIAA1107	Q9UPP5	1409 aa		13.72	□□□□□ -0.21
NUDCD3-208	ENST00000480209	GCC2	Q8IWJ2	1684 aa		13.71	□□□□□ -0.21
NUDCD3-208	ENST00000480209	POGZ	Q7Z3K3	1410 aa		13.71	□□□□□ -0.22
NUDCD3-208	ENST00000480209	ZFYVE16	Q7Z3T8	1539 aa		13.7	□□□□□ -0.22
NUDCD3-208	ENST00000480209	SHANK2	Q9UPX8	1470 aa		13.7	□□□□□ -0.22
NUDCD3-208	ENST00000480209	SCAPER	Q9BY12	1400 aa		13.7	□□□□□ -0.22
NUDCD3-208	ENST00000480209	KIDINS220	Q9ULH0	1771 aa		13.69	□□□□□ -0.22
NUDCD3-208	ENST00000480209	TRH	P20396	242 aa	Predicted RBP	13.69	□□□□□ -0.22
NUDCD3-208	ENST00000480209	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.68	□□□□□ -0.22
NUDCD3-208	ENST00000480209	HECW2	Q9P2P5	1572 aa		13.68	□□□□□ -0.22
NUDCD3-208	ENST00000480209	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
NUDCD3-208	ENST00000480209	PLXNC1	O60486	1568 aa		13.67	□□□□□ -0.22
NUDCD3-208	ENST00000480209	ZMYM4	Q5VZL5	1548 aa		13.67	□□□□□ -0.22
NUDCD3-208	ENST00000480209	C9orf84	Q5VXU9	1444 aa		13.66	□□□□□ -0.22
NUDCD3-208	ENST00000480209	ATP7A	Q04656	1500 aa		13.66	□□□□□ -0.22
NUDCD3-208	ENST00000480209	ABCA6	Q8N139	1617 aa		13.66	□□□□□ -0.22
NUDCD3-208	ENST00000480209	ITGAE	P38570	1179 aa		13.66	□□□□□ -0.22
NUDCD3-208	ENST00000480209	ADGRL2	O95490	1459 aa		13.66	□□□□□ -0.22
NUDCD3-208	ENST00000480209	ZNF518A	Q6AHZ1	1483 aa		13.66	□□□□□ -0.22
NUDCD3-208	ENST00000480209	KDM6B	O15054	1643 aa		13.65	□□□□□ -0.22
NUDCD3-208	ENST00000480209	PCGF6	Q9BYE7	350 aa		13.65	□□□□□ -0.22
NUDCD3-208	ENST00000480209	DENND4B	O75064	1496 aa	Predicted RBP	13.65	□□□□□ -0.22
NUDCD3-208	ENST00000480209	DIP2C	Q9Y2E4	1556 aa		13.62	□□□□□ -0.23
NUDCD3-208	ENST00000480209	SIGLEC1	Q9BZZ2	1709 aa		13.61	□□□□□ -0.23
NUDCD3-208	ENST00000480209	AFAP1	Q8N556	730 aa		13.61	□□□□□ -0.23
NUDCD3-208	ENST00000480209	ARHGEF40	Q8TER5	1519 aa		13.6	□□□□□ -0.23
NUDCD3-208	ENST00000480209	HFM1	A2PYH4	1435 aa		13.6	□□□□□ -0.23
NUDCD3-208	ENST00000480209	RAPGEF3	O95398	923 aa		13.6	□□□□□ -0.23
NUDCD3-208	ENST00000480209	NAIP	Q13075	1403 aa		13.6	□□□□□ -0.23
NUDCD3-208	ENST00000480209	CHIC2	Q9UKJ5	165 aa		13.6	□□□□□ -0.23
NUDCD3-208	ENST00000480209	MLH3	Q9UHC1	1453 aa		13.6	□□□□□ -0.23
NUDCD3-208	ENST00000480209	ROCK1	Q13464	1354 aa		13.59	□□□□□ -0.23
NUDCD3-208	ENST00000480209	NCOA1	Q15788	1441 aa		13.59	□□□□□ -0.23
NUDCD3-208	ENST00000480209	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.58	□□□□□ -0.24
NUDCD3-208	ENST00000480209	YEATS2	Q9ULM3	1422 aa		13.58	□□□□□ -0.24
NUDCD3-208	ENST00000480209	RSPH4A	Q5TD94	716 aa		13.56	□□□□□ -0.24
NUDCD3-208	ENST00000480209	SPAG9	O60271	1321 aa	Known RBP	13.56	□□□□□ -0.24
NUDCD3-208	ENST00000480209	KIF15	Q9NS87	1388 aa		13.56	□□□□□ -0.24
NUDCD3-208	ENST00000480209	RRP7BP	Q9NSQ0	103 aa		13.55	□□□□□ -0.24
NUDCD3-208	ENST00000480209	BCORL1	Q5H9F3	1711 aa		13.55	□□□□□ -0.24
NUDCD3-208	ENST00000480209	ANKRD30A	Q9BXX3	1397 aa		13.55	□□□□□ -0.24
NUDCD3-208	ENST00000480209	DUOX2	Q9NRD8	1548 aa		13.54	□□□□□ -0.24
NUDCD3-208	ENST00000480209	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.54	□□□□□ -0.24
NUDCD3-208	ENST00000480209	MAGI2	Q86UL8	1455 aa		13.54	□□□□□ -0.24
NUDCD3-208	ENST00000480209	UNC13B	O14795	1591 aa		13.53	□□□□□ -0.24
NUDCD3-208	ENST00000480209	RERE	Q9P2R6	1566 aa		13.53	□□□□□ -0.24
NUDCD3-208	ENST00000480209	DEPDC5	O75140	1603 aa		13.53	□□□□□ -0.24
NUDCD3-208	ENST00000480209	MROH1	Q8NDA8	1641 aa		13.53	□□□□□ -0.24
NUDCD3-208	ENST00000480209	TSPY4	P0CV99	314 aa		13.52	□□□□□ -0.25
NUDCD3-208	ENST00000480209	TSPY10	P0CW01	314 aa		13.52	□□□□□ -0.25
NUDCD3-208	ENST00000480209	RAB3GAP2	Q9H2M9	1393 aa		13.52	□□□□□ -0.25
NUDCD3-208	ENST00000480209	SETD5	Q9C0A6	1442 aa		13.52	□□□□□ -0.25
NUDCD3-208	ENST00000480209	RNF17	Q9BXT8	1623 aa	Known RBP	13.51	□□□□□ -0.25
NUDCD3-208	ENST00000480209	A2M	P01023	1474 aa		13.5	□□□□□ -0.25
NUDCD3-208	ENST00000480209	ERBIN	Q96RT1	1412 aa		13.5	□□□□□ -0.25
NUDCD3-208	ENST00000480209	ANKRD50	Q9ULJ7	1429 aa		13.5	□□□□□ -0.25

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