RNA–Protein interactions for RNA: ENST00000480108.1

MMS19-216, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, humanhuman

TSL 2

Gene MMS19, Length 677 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19-216ENST00000480108 RAPGEF2Q9Y4G8 1499 aa20.46■□□□□ 0.87
MMS19-216ENST00000480108 SCAF1Q9H7N4 1312 aaKnown RBP20.46■□□□□ 0.87
MMS19-216ENST00000480108 ARHGEF12Q9NZN5 1544 aa20.45■□□□□ 0.86
MMS19-216ENST00000480108 HSPA1LP34931 641 aa20.45■□□□□ 0.86
MMS19-216ENST00000480108 ZMYM4Q5VZL5 1548 aa20.43■□□□□ 0.86
MMS19-216ENST00000480108 MAGI2Q86UL8 1455 aa20.39■□□□□ 0.85
MMS19-216ENST00000480108 CTTNBP2Q8WZ74 1663 aa20.38■□□□□ 0.85
MMS19-216ENST00000480108 ZNF335Q9H4Z2 1342 aaPredicted RBP20.38■□□□□ 0.85
MMS19-216ENST00000480108 P3H3Q8IVL6 736 aa20.38■□□□□ 0.85
MMS19-216ENST00000480108 PIP4K2BP78356 416 aa20.37■□□□□ 0.85
MMS19-216ENST00000480108 CFAP74Q9C0B2 1584 aa20.37■□□□□ 0.85
MMS19-216ENST00000480108 HECW1Q76N89 1606 aa20.36■□□□□ 0.85
MMS19-216ENST00000480108 NCOA1Q15788 1441 aa20.36■□□□□ 0.85
MMS19-216ENST00000480108 ATP10AO60312 1499 aa20.31■□□□□ 0.84
MMS19-216ENST00000480108 C9orf84Q5VXU9 1444 aa20.3■□□□□ 0.84
MMS19-216ENST00000480108 ESF1Q9H501 851 aaKnown RBP20.3■□□□□ 0.84
MMS19-216ENST00000480108 C3P01024 1663 aa20.29■□□□□ 0.84
MMS19-216ENST00000480108 CAMSAP1Q5T5Y3 1602 aa20.27■□□□□ 0.83
MMS19-216ENST00000480108 NCKAP5LQ9HCH0 1330 aa20.27■□□□□ 0.83
MMS19-216ENST00000480108 PLEKHD1A6NEE1 506 aa20.26■□□□□ 0.83
MMS19-216ENST00000480108 TOM1O60784 492 aa20.26■□□□□ 0.83
MMS19-216ENST00000480108 MYT1LQ9UL68 1186 aa20.25■□□□□ 0.83
MMS19-216ENST00000480108 TRAPPC8Q9Y2L5 1435 aa20.24■□□□□ 0.83
MMS19-216ENST00000480108 SCAPERQ9BY12 1400 aa20.21■□□□□ 0.83
MMS19-216ENST00000480108 RAPGEF6Q8TEU7 1601 aa20.2■□□□□ 0.82
MMS19-216ENST00000480108 SENP3Q9H4L4 574 aaPredicted RBP20.18■□□□□ 0.82
MMS19-216ENST00000480108 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.17■□□□□ 0.82
MMS19-216ENST00000480108 RGS17Q9UGC6 210 aaPredicted RBP20.14■□□□□ 0.81
MMS19-216ENST00000480108 PKD2Q13563 968 aa20.13■□□□□ 0.81
MMS19-216ENST00000480108 SUPT6HQ7KZ85 1726 aaKnown RBP20.1■□□□□ 0.81
MMS19-216ENST00000480108 PPP6R1Q9UPN7 881 aa20.1■□□□□ 0.81
MMS19-216ENST00000480108 NUP153P49790 1475 aaKnown RBP20.09■□□□□ 0.81
MMS19-216ENST00000480108 EFCAB2Q5VUJ9 269 aa20.05■□□□□ 0.8
MMS19-216ENST00000480108 PLA2R1Q13018 1463 aa20.04■□□□□ 0.8
MMS19-216ENST00000480108 PTPRKQ15262 1439 aa20.03■□□□□ 0.8
MMS19-216ENST00000480108 CPS1P31327 1500 aa20.03■□□□□ 0.8
MMS19-216ENST00000480108 RANGAP1P46060 587 aaPredicted RBP20.03■□□□□ 0.8
MMS19-216ENST00000480108 AFAP1Q8N556 730 aa20.03■□□□□ 0.8
MMS19-216ENST00000480108 PLCH2O75038 1416 aa20.02■□□□□ 0.8
MMS19-216ENST00000480108 NPATQ14207 1427 aa20.02■□□□□ 0.79
MMS19-216ENST00000480108 CNTLNQ9NXG0 1405 aa20.02■□□□□ 0.79
MMS19-216ENST00000480108 DIP2CQ9Y2E4 1556 aa20.01■□□□□ 0.79
MMS19-216ENST00000480108 TCOF1Q13428 1488 aaKnown RBP20.01■□□□□ 0.79
MMS19-216ENST00000480108 AGLP35573 1532 aa20.01■□□□□ 0.79
MMS19-216ENST00000480108 ZNF518AQ6AHZ1 1483 aa20■□□□□ 0.79
MMS19-216ENST00000480108 POTEAQ6S8J7 498 aa20■□□□□ 0.79
MMS19-216ENST00000480108 REREQ9P2R6 1566 aa20■□□□□ 0.79
MMS19-216ENST00000480108 ZNF142P52746 1687 aaPredicted RBP19.97■□□□□ 0.79
MMS19-216ENST00000480108 SETD1AO15047 1707 aaKnown RBP19.96■□□□□ 0.79
MMS19-216ENST00000480108 SHANK2Q9UPX8 1470 aa19.96■□□□□ 0.79
MMS19-216ENST00000480108 SAMD9Q5K651 1589 aa19.95■□□□□ 0.78
MMS19-216ENST00000480108 MYO3AQ8NEV4 1616 aa19.95■□□□□ 0.78
MMS19-216ENST00000480108 ALKQ9UM73 1620 aa19.95■□□□□ 0.78
MMS19-216ENST00000480108 ABCA6Q8N139 1617 aa19.94■□□□□ 0.78
MMS19-216ENST00000480108 KDM5CP41229 1560 aa19.94■□□□□ 0.78
MMS19-216ENST00000480108 CEP170BQ9Y4F5 1589 aaPredicted RBP19.94■□□□□ 0.78
MMS19-216ENST00000480108 ZMYM3Q14202 1370 aa19.94■□□□□ 0.78
MMS19-216ENST00000480108 MROH2AA6NES4 1674 aa19.94■□□□□ 0.78
MMS19-216ENST00000480108 MYO5CQ9NQX4 1742 aa19.92■□□□□ 0.78
MMS19-216ENST00000480108 PRXQ9BXM0 1461 aa19.88■□□□□ 0.77
MMS19-216ENST00000480108 POLR1AO95602 1720 aaPredicted RBP19.85■□□□□ 0.77
MMS19-216ENST00000480108 ATP1B4Q9UN42 357 aaPredicted RBP19.85■□□□□ 0.77
MMS19-216ENST00000480108 MLH3Q9UHC1 1453 aa19.85■□□□□ 0.77
MMS19-216ENST00000480108 UPF1Q92900 1129 aaKnown RBP eCLIP19.83■□□□□ 0.77
MMS19-216ENST00000480108 ARHGAP5Q13017 1502 aa19.82■□□□□ 0.76
MMS19-216ENST00000480108 CLTCQ00610 1675 aaKnown RBP19.82■□□□□ 0.76
MMS19-216ENST00000480108 CDK13Q14004 1512 aaKnown RBP19.8■□□□□ 0.76
MMS19-216ENST00000480108 VWDEQ8N2E2 1590 aa19.79■□□□□ 0.76
MMS19-216ENST00000480108 NEURL4Q96JN8 1562 aa19.79■□□□□ 0.76
MMS19-216ENST00000480108 DNMT1P26358 1616 aaKnown RBP19.79■□□□□ 0.76
MMS19-216ENST00000480108 CDK11AQ9UQ88 783 aaPredicted RBP19.77■□□□□ 0.76
MMS19-216ENST00000480108 A2ML1A8K2U0 1454 aa19.77■□□□□ 0.76
MMS19-216ENST00000480108 RNF17Q9BXT8 1623 aaKnown RBP19.76■□□□□ 0.75
MMS19-216ENST00000480108 KIDINS220Q9ULH0 1771 aa19.74■□□□□ 0.75
MMS19-216ENST00000480108 GGT6Q6P531 493 aa19.72■□□□□ 0.75
MMS19-216ENST00000480108 ANKLE2Q86XL3 938 aa19.72■□□□□ 0.75
MMS19-216ENST00000480108 LRRC7Q96NW7 1537 aa19.71■□□□□ 0.75
MMS19-216ENST00000480108 KIF14Q15058 1648 aa19.71■□□□□ 0.75
MMS19-216ENST00000480108 STRCP1A6NGW2 1772 aa19.68■□□□□ 0.74
MMS19-216ENST00000480108 ITSN2Q9NZM3 1697 aa19.66■□□□□ 0.74
MMS19-216ENST00000480108 NPHP4O75161 1426 aaPredicted RBP19.66■□□□□ 0.74
MMS19-216ENST00000480108 CDC42BPBQ9Y5S2 1711 aa19.65■□□□□ 0.74
MMS19-216ENST00000480108 TRIM52Q96A61 297 aa19.65■□□□□ 0.74
MMS19-216ENST00000480108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.65■□□□□ 0.74
MMS19-216ENST00000480108 SYNMO15061 1565 aa19.65■□□□□ 0.74
MMS19-216ENST00000480108 SRCAPQ6ZRS2 3230 aa19.64■□□□□ 0.73
MMS19-216ENST00000480108 ABCC1P33527 1531 aa19.63■□□□□ 0.73
MMS19-216ENST00000480108 CLIP1P30622 1438 aa19.62■□□□□ 0.73
MMS19-216ENST00000480108 THEMISQ8N1K5 641 aaPredicted RBP19.62■□□□□ 0.73
MMS19-216ENST00000480108 SPAG9O60271 1321 aaKnown RBP19.61■□□□□ 0.73
MMS19-216ENST00000480108 IQGAP1P46940 1657 aa19.6■□□□□ 0.73
MMS19-216ENST00000480108 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
MMS19-216ENST00000480108 MED14O60244 1454 aa19.6■□□□□ 0.73
MMS19-216ENST00000480108 ZNF777Q9ULD5 760 aaPredicted RBP19.59■□□□□ 0.73
MMS19-216ENST00000480108 DEPDC5O75140 1603 aa19.58■□□□□ 0.73
MMS19-216ENST00000480108 TNRQ92752 1358 aa19.57■□□□□ 0.72
MMS19-216ENST00000480108 TROQ12816 1431 aaPredicted RBP19.57■□□□□ 0.72
MMS19-216ENST00000480108 FAM135BQ49AJ0 1406 aa19.57■□□□□ 0.72
MMS19-216ENST00000480108 FBXO31Q5XUX0 539 aaPredicted RBP19.56■□□□□ 0.72
MMS19-216ENST00000480108 SAMD9LQ8IVG5 1584 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms