RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 KANK4Q5T7N3 995 aaPredicted RBP15.04■□□□□ -0
CD46-214ENST00000480003 ZCCHC11Q5TAX3 1644 aaKnown RBP15.03■□□□□ -0
CD46-214ENST00000480003 MAP3K1Q13233 1512 aa15.02■□□□□ -0
CD46-214ENST00000480003 KCNH8Q96L42 1107 aa15.02■□□□□ -0
CD46-214ENST00000480003 MAPKBP1O60336 1514 aa15.02□□□□□ -0.01
CD46-214ENST00000480003 LRRIQ1Q96JM4 1722 aa15□□□□□ -0.01
CD46-214ENST00000480003 WDR7Q9Y4E6 1490 aa14.98□□□□□ -0.01
CD46-214ENST00000480003 TROQ12816 1431 aaPredicted RBP14.98□□□□□ -0.01
CD46-214ENST00000480003 MAGI3Q5TCQ9 1506 aa14.97□□□□□ -0.01
CD46-214ENST00000480003 FAM69CQ0P6D2 419 aa14.96□□□□□ -0.01
CD46-214ENST00000480003 TIAM1Q13009 1591 aa14.96□□□□□ -0.01
CD46-214ENST00000480003 MTUS2Q5JR59 1369 aa14.96□□□□□ -0.02
CD46-214ENST00000480003 ABCC10Q5T3U5 1492 aa14.95□□□□□ -0.02
CD46-214ENST00000480003 LRRC9Q6ZRR7 1453 aa14.95□□□□□ -0.02
CD46-214ENST00000480003 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
CD46-214ENST00000480003 GLI2P10070 1586 aa14.9□□□□□ -0.02
CD46-214ENST00000480003 CFAP43Q8NDM7 1665 aa14.89□□□□□ -0.03
CD46-214ENST00000480003 ZBTB12Q9Y330 459 aaPredicted RBP14.87□□□□□ -0.03
CD46-214ENST00000480003 EHBP1L1Q8N3D4 1523 aa14.87□□□□□ -0.03
CD46-214ENST00000480003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.87□□□□□ -0.031e-6■□□□□ 10.9
CD46-214ENST00000480003 DIP2BQ9P265 1576 aa14.86□□□□□ -0.03
CD46-214ENST00000480003 CD109Q6YHK3 1445 aa14.86□□□□□ -0.03
CD46-214ENST00000480003 RBM42Q9BTD8 480 aaKnown RBP14.86□□□□□ -0.03
CD46-214ENST00000480003 NCOA2Q15596 1464 aa14.85□□□□□ -0.03
CD46-214ENST00000480003 PLCH2O75038 1416 aa14.84□□□□□ -0.03
CD46-214ENST00000480003 KIF14Q15058 1648 aa14.84□□□□□ -0.03
CD46-214ENST00000480003 GPATCH8Q9UKJ3 1502 aaKnown RBP14.83□□□□□ -0.04
CD46-214ENST00000480003 ABCA9Q8IUA7 1624 aa14.83□□□□□ -0.04
CD46-214ENST00000480003 CCNB3Q8WWL7 1395 aa14.83□□□□□ -0.04
CD46-214ENST00000480003 EFCAB2Q5VUJ9 269 aa14.82□□□□□ -0.04
CD46-214ENST00000480003 PHLDB1Q86UU1 1377 aa14.82□□□□□ -0.04
CD46-214ENST00000480003 KIF13AQ9H1H9 1805 aa14.8□□□□□ -0.04
CD46-214ENST00000480003 CFDP1Q9UEE9 299 aaPredicted RBP14.8□□□□□ -0.04
CD46-214ENST00000480003 SUPT6HQ7KZ85 1726 aaKnown RBP14.79□□□□□ -0.04
CD46-214ENST00000480003 MAP3K4Q9Y6R4 1608 aa14.78□□□□□ -0.04
CD46-214ENST00000480003 TTC37Q6PGP7 1564 aa14.78□□□□□ -0.04
CD46-214ENST00000480003 ARAP3Q8WWN8 1544 aa14.76□□□□□ -0.05
CD46-214ENST00000480003 MYOM3Q5VTT5 1437 aa14.76□□□□□ -0.05
CD46-214ENST00000480003 MIA2Q96PC5 1412 aa14.75□□□□□ -0.05
CD46-214ENST00000480003 ZNF644Q9H582 1327 aaPredicted RBP14.75□□□□□ -0.05
CD46-214ENST00000480003 ZNF777Q9ULD5 760 aaPredicted RBP14.74□□□□□ -0.05
CD46-214ENST00000480003 AKNAQ7Z591 1439 aa14.74□□□□□ -0.05
CD46-214ENST00000480003 FANCAO15360 1455 aa14.73□□□□□ -0.05
CD46-214ENST00000480003 PPRC1Q5VV67 1664 aaKnown RBP14.72□□□□□ -0.05
CD46-214ENST00000480003 TEX14Q8IWB6 1497 aa14.72□□□□□ -0.05
CD46-214ENST00000480003 NEO1Q92859 1461 aa14.72□□□□□ -0.05
CD46-214ENST00000480003 CDC42BPBQ9Y5S2 1711 aa14.72□□□□□ -0.05
CD46-214ENST00000480003 HNRNPMP52272 730 aaKnown RBP eCLIP14.71□□□□□ -0.059e-8■■■■■ 28.4
CD46-214ENST00000480003 FGD6Q6ZV73 1430 aa14.71□□□□□ -0.05
CD46-214ENST00000480003 CDC42BPAQ5VT25 1732 aa14.71□□□□□ -0.05
CD46-214ENST00000480003 KIAA1107Q9UPP5 1409 aa14.7□□□□□ -0.06
CD46-214ENST00000480003 RSPH4AQ5TD94 716 aa14.7□□□□□ -0.06
CD46-214ENST00000480003 ARHGAP5Q13017 1502 aa14.7□□□□□ -0.06
CD46-214ENST00000480003 MYO5CQ9NQX4 1742 aa14.69□□□□□ -0.06
CD46-214ENST00000480003 TSPOAP1O95153 1857 aa14.69□□□□□ -0.06
CD46-214ENST00000480003 PREX2Q70Z35 1606 aa14.69□□□□□ -0.06
CD46-214ENST00000480003 COL17A1Q9UMD9 1497 aaPredicted RBP14.69□□□□□ -0.06
CD46-214ENST00000480003 SCAPERQ9BY12 1400 aa14.68□□□□□ -0.06
CD46-214ENST00000480003 RRBP1Q9P2E9 1410 aaKnown RBP14.68□□□□□ -0.06
CD46-214ENST00000480003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.68□□□□□ -0.063e-6■■□□□ 12.8
CD46-214ENST00000480003 ARHGEF12Q9NZN5 1544 aa14.67□□□□□ -0.06
CD46-214ENST00000480003 RAPGEF3O95398 923 aa14.67□□□□□ -0.06
CD46-214ENST00000480003 AFAP1Q8N556 730 aa14.67□□□□□ -0.06
CD46-214ENST00000480003 TCOF1Q13428 1488 aaKnown RBP14.67□□□□□ -0.06
CD46-214ENST00000480003 MBD5Q9P267 1494 aa14.67□□□□□ -0.06
CD46-214ENST00000480003 PLEKHH2Q8IVE3 1493 aa14.65□□□□□ -0.06
CD46-214ENST00000480003 FAM50AQ14320 339 aaKnown RBP14.65□□□□□ -0.06
CD46-214ENST00000480003 ITSN2Q9NZM3 1697 aa14.65□□□□□ -0.06
CD46-214ENST00000480003 SAMD9LQ8IVG5 1584 aa14.64□□□□□ -0.07
CD46-214ENST00000480003 ADGRL1O94910 1474 aa14.64□□□□□ -0.07
CD46-214ENST00000480003 TRAPPC8Q9Y2L5 1435 aa14.64□□□□□ -0.07
CD46-214ENST00000480003 DENND4BO75064 1496 aaPredicted RBP14.63□□□□□ -0.07
CD46-214ENST00000480003 CAMSAP2Q08AD1 1489 aa14.63□□□□□ -0.07
CD46-214ENST00000480003 PTPN23Q9H3S7 1636 aa14.62□□□□□ -0.07
CD46-214ENST00000480003 TSPY4P0CV99 314 aa14.61□□□□□ -0.07
CD46-214ENST00000480003 TSPY10P0CW01 314 aa14.61□□□□□ -0.07
CD46-214ENST00000480003 ABCC1P33527 1531 aa14.61□□□□□ -0.07
CD46-214ENST00000480003 CFAP74Q9C0B2 1584 aa14.6□□□□□ -0.07
CD46-214ENST00000480003 ABCC5O15440 1437 aa14.6□□□□□ -0.07
CD46-214ENST00000480003 POGZQ7Z3K3 1410 aa14.58□□□□□ -0.07
CD46-214ENST00000480003 SYCP2Q9BX26 1530 aa14.58□□□□□ -0.08
CD46-214ENST00000480003 POTEHQ6S545 545 aa14.58□□□□□ -0.08
CD46-214ENST00000480003 KDM6BO15054 1643 aa14.58□□□□□ -0.08
CD46-214ENST00000480003 PTPRKQ15262 1439 aa14.58□□□□□ -0.08
CD46-214ENST00000480003 MKRN4PQ13434 485 aaPredicted RBP14.57□□□□□ -0.08
CD46-214ENST00000480003 SPAG9O60271 1321 aaKnown RBP14.57□□□□□ -0.08
CD46-214ENST00000480003 DAPK1P53355 1430 aa14.57□□□□□ -0.08
CD46-214ENST00000480003 ZNF518AQ6AHZ1 1483 aa14.57□□□□□ -0.08
CD46-214ENST00000480003 ARHGEF5Q12774 1597 aa14.56□□□□□ -0.08
CD46-214ENST00000480003 TRIM26Q12899 539 aaPredicted RBP14.56□□□□□ -0.08
CD46-214ENST00000480003 AKT1S1Q96B36 256 aa14.56□□□□□ -0.08
CD46-214ENST00000480003 RTEL1-TNFRSF6BF6WH68 1400 aa14.56□□□□□ -0.08
CD46-214ENST00000480003 KDM4FA0A1W2PPD8 638 aa14.55□□□□□ -0.08
CD46-214ENST00000480003 CHIC2Q9UKJ5 165 aa14.55□□□□□ -0.08
CD46-214ENST00000480003 CCDC141Q6ZP82 1450 aa14.55□□□□□ -0.08
CD46-214ENST00000480003 MLH3Q9UHC1 1453 aa14.55□□□□□ -0.08
CD46-214ENST00000480003 ITGAEP38570 1179 aa14.54□□□□□ -0.08
CD46-214ENST00000480003 KDM5CP41229 1560 aa14.52□□□□□ -0.08
CD46-214ENST00000480003 FRMPD1Q5SYB0 1578 aa14.52□□□□□ -0.08
CD46-214ENST00000480003 MAGI2Q86UL8 1455 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms