RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.67□□□□□ -0.86
NF1-209ENST00000479536 ZFP91Q96JP5 570 aaPredicted RBP9.67□□□□□ -0.86
NF1-209ENST00000479536 PHF8Q9UPP1 1060 aa9.67□□□□□ -0.86
NF1-209ENST00000479536 ARSIQ5FYB1 569 aa9.64□□□□□ -0.87
NF1-209ENST00000479536 RNF25Q96BH1 459 aaPredicted RBP9.64□□□□□ -0.87
NF1-209ENST00000479536 VGFO15240 615 aaPredicted RBP9.63□□□□□ -0.87
NF1-209ENST00000479536 ANKRD13DQ6ZTN6 518 aa9.61□□□□□ -0.87
NF1-209ENST00000479536 KHSRPQ92945 711 aaKnown RBP eCLIP9.6□□□□□ -0.87
NF1-209ENST00000479536 PTGER2P43116 358 aa9.59□□□□□ -0.87
NF1-209ENST00000479536 ZNF316A6NFI3 1004 aaPredicted RBP9.58□□□□□ -0.88
NF1-209ENST00000479536 NLRP6P59044 892 aa9.57□□□□□ -0.88
NF1-209ENST00000479536 BCL11BQ9C0K0 894 aaPredicted RBP9.53□□□□□ -0.88
NF1-209ENST00000479536 LSM11P83369 360 aaKnown RBP eCLIP9.52□□□□□ -0.89
NF1-209ENST00000479536 FBXO22Q8NEZ5 403 aa9.52□□□□□ -0.89
NF1-209ENST00000479536 STK24Q9Y6E0 443 aa9.51□□□□□ -0.89
NF1-209ENST00000479536 C2orf72A6NCS6 295 aa9.49□□□□□ -0.89
NF1-209ENST00000479536 NUDT7P0C024 238 aa9.49□□□□□ -0.89
NF1-209ENST00000479536 TAOK2Q9UL54 1235 aa9.49□□□□□ -0.89
NF1-209ENST00000479536 MFRPQ9BY79 579 aa9.47□□□□□ -0.89
NF1-209ENST00000479536 KIF3CO14782 793 aa9.46□□□□□ -0.9
NF1-209ENST00000479536 AXIN2Q9Y2T1 843 aa9.46□□□□□ -0.9
NF1-209ENST00000479536 PBX2P40425 430 aa9.45□□□□□ -0.9
NF1-209ENST00000479536 LHX6Q9UPM6 363 aa9.45□□□□□ -0.9
NF1-209ENST00000479536 STK25O00506 426 aa9.44□□□□□ -0.9
NF1-209ENST00000479536 PCDHGA4Q9Y5G9 962 aa9.43□□□□□ -0.9
NF1-209ENST00000479536 POTEEQ6S8J3 1075 aa9.42□□□□□ -0.9
NF1-209ENST00000479536 TMC2Q8TDI7 906 aa9.41□□□□□ -0.9
NF1-209ENST00000479536 SLC34A2O95436 690 aa9.39□□□□□ -0.91
NF1-209ENST00000479536 PLA2G2EQ9NZK7 142 aa9.39□□□□□ -0.91
NF1-209ENST00000479536 HCSTQ9UBK5 93 aa9.37□□□□□ -0.91
NF1-209ENST00000479536 ECM2O94769 699 aaPredicted RBP9.36□□□□□ -0.91
NF1-209ENST00000479536 ADGRD1Q6QNK2 874 aa9.35□□□□□ -0.91
NF1-209ENST00000479536 ARHGAP33O14559 1287 aa9.34□□□□□ -0.91
NF1-209ENST00000479536 PSDA5PKW4 1024 aaPredicted RBP9.32□□□□□ -0.92
NF1-209ENST00000479536 PPP1R37O75864 691 aa9.3□□□□□ -0.92
NF1-209ENST00000479536 RGL2O15211 777 aa9.28□□□□□ -0.92
NF1-209ENST00000479536 PSEN2P49810 448 aa9.28□□□□□ -0.92
NF1-209ENST00000479536 DMRTA1Q5VZB9 504 aa9.28□□□□□ -0.92
NF1-209ENST00000479536 TK2O00142 265 aa9.27□□□□□ -0.93
NF1-209ENST00000479536 PTCD2Q8WV60 388 aaKnown RBP9.26□□□□□ -0.93
NF1-209ENST00000479536 KDM4FA0A1W2PPD8 638 aa9.25□□□□□ -0.93
NF1-209ENST00000479536 HRO43593 1189 aa9.25□□□□□ -0.93
NF1-209ENST00000479536 KCTD12Q96CX2 325 aaKnown RBP9.25□□□□□ -0.93
NF1-209ENST00000479536 STAC3Q96MF2 364 aa9.24□□□□□ -0.93
NF1-209ENST00000479536 PKD2Q13563 968 aa9.23□□□□□ -0.93
NF1-209ENST00000479536 PPP4R3BQ5MIZ7 849 aa9.23□□□□□ -0.93
NF1-209ENST00000479536 PLPP6Q8IY26 295 aa9.23□□□□□ -0.93
NF1-209ENST00000479536 FOXK1P85037 733 aa9.21□□□□□ -0.94
NF1-209ENST00000479536 TBC1D12O60347 775 aa9.2□□□□□ -0.94
NF1-209ENST00000479536 KCNK17Q96T54 332 aa9.2□□□□□ -0.94
NF1-209ENST00000479536 KCNH8Q96L42 1107 aa9.19□□□□□ -0.94
NF1-209ENST00000479536 GPHNQ9NQX3 736 aaPredicted RBP9.18□□□□□ -0.94
NF1-209ENST00000479536 DSG2Q14126 1118 aa9.17□□□□□ -0.94
NF1-209ENST00000479536 PTPN5P54829 565 aa9.16□□□□□ -0.94
NF1-209ENST00000479536 AMER1Q5JTC6 1135 aaPredicted RBP9.16□□□□□ -0.94
NF1-209ENST00000479536 RTN4Q9NQC3 1192 aaKnown RBP9.16□□□□□ -0.94
NF1-209ENST00000479536 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
NF1-209ENST00000479536 UPF1Q92900 1129 aaKnown RBP eCLIP9.11□□□□□ -0.95
NF1-209ENST00000479536 ZNF454Q8N9F8 522 aa9.1□□□□□ -0.95
NF1-209ENST00000479536 HS6ST3Q8IZP7 471 aa9.08□□□□□ -0.96
NF1-209ENST00000479536 OXER1Q8TDS5 423 aa9.08□□□□□ -0.96
NF1-209ENST00000479536 BCL2L12Q9HB09 334 aa9.07□□□□□ -0.96
NF1-209ENST00000479536 GOLGA8CPA6NN73 597 aa9.06□□□□□ -0.96
NF1-209ENST00000479536 THSD4Q6ZMP0 1018 aa9.05□□□□□ -0.96
NF1-209ENST00000479536 PTPREP23469 700 aa9.04□□□□□ -0.96
NF1-209ENST00000479536 SLC4A5Q9BY07 1137 aa9.04□□□□□ -0.96
NF1-209ENST00000479536 BHMG1C9JSJ3 638 aaPredicted RBP9.03□□□□□ -0.96
NF1-209ENST00000479536 RGS20O76081 388 aa9.03□□□□□ -0.96
NF1-209ENST00000479536 WNT2BQ93097 391 aa9.03□□□□□ -0.96
NF1-209ENST00000479536 IRX2Q9BZI1 471 aaPredicted RBP9.03□□□□□ -0.96
NF1-209ENST00000479536 CHGAP10645 457 aaKnown RBP9.02□□□□□ -0.97
NF1-209ENST00000479536 FOSBP53539 338 aa9.02□□□□□ -0.97
NF1-209ENST00000479536 IFFO2Q5TF58 517 aa9.02□□□□□ -0.97
NF1-209ENST00000479536 MRPL50Q8N5N7 158 aaKnown RBP9.02□□□□□ -0.97
NF1-209ENST00000479536 PPP1R15BQ5SWA1 713 aa9.01□□□□□ -0.97
NF1-209ENST00000479536 ZBED2Q9BTP6 218 aa9.01□□□□□ -0.97
NF1-209ENST00000479536 A0A0G2JS52 829 aa9□□□□□ -0.97
NF1-209ENST00000479536 SLC24A1O60721 1099 aa9□□□□□ -0.97
NF1-209ENST00000479536 CRISPLD2Q9H0B8 497 aa9□□□□□ -0.97
NF1-209ENST00000479536 NBPF3Q9H094 633 aa8.98□□□□□ -0.97
NF1-209ENST00000479536 JPH4Q96JJ6 628 aa8.97□□□□□ -0.97
NF1-209ENST00000479536 ADAM33Q9BZ11 813 aa8.97□□□□□ -0.97
NF1-209ENST00000479536 EVI5O60447 810 aa8.96□□□□□ -0.98
NF1-209ENST00000479536 NKX1-1Q15270 411 aaPredicted RBP8.96□□□□□ -0.98
NF1-209ENST00000479536 ZDHHC16Q969W1 377 aa8.96□□□□□ -0.98
NF1-209ENST00000479536 ANO8Q9HCE9 1232 aaPredicted RBP8.95□□□□□ -0.98
NF1-209ENST00000479536 RYDENQ9NUL5 291 aaKnown RBP8.95□□□□□ -0.98
NF1-209ENST00000479536 PDE4AP27815 886 aa8.93□□□□□ -0.98
NF1-209ENST00000479536 NCKAP5LQ9HCH0 1330 aa8.93□□□□□ -0.98
NF1-209ENST00000479536 MAP3K9P80192 1104 aa8.9□□□□□ -0.98
NF1-209ENST00000479536 ANKK1Q8NFD2 765 aa8.9□□□□□ -0.98
NF1-209ENST00000479536 DNAJC5Q9H3Z4 198 aa8.9□□□□□ -0.98
NF1-209ENST00000479536 LARP6Q9BRS8 491 aaKnown RBP8.89□□□□□ -0.99
NF1-209ENST00000479536 PPP1R3GB7ZBB8 358 aa8.88□□□□□ -0.99
NF1-209ENST00000479536 PROX2Q3B8N5 592 aa8.88□□□□□ -0.99
NF1-209ENST00000479536 DDX27Q96GQ7 796 aaKnown RBP8.88□□□□□ -0.99
NF1-209ENST00000479536 RABGEF1Q9UJ41 708 aa8.88□□□□□ -0.99
NF1-209ENST00000479536 BCAMP50895 628 aa8.87□□□□□ -0.99
NF1-209ENST00000479536 ITGBL1O95965 494 aaPredicted RBP8.86□□□□□ -0.99
NF1-209ENST00000479536 COL9A1P20849 921 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms