RNA–Protein interactions for RNA: ENST00000478862.1

NCK1-206, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-206ENST00000478862 MMRN1Q13201 1228 aa10.59□□□□□ -0.71
NCK1-206ENST00000478862 POTEB3A0JP26 581 aa10.53□□□□□ -0.72
NCK1-206ENST00000478862 POTEBQ6S5H4 581 aa10.53□□□□□ -0.72
NCK1-206ENST00000478862 TMEM92Q6UXU6 159 aa10.53□□□□□ -0.72
NCK1-206ENST00000478862 FBXO22Q8NEZ5 403 aa10.53□□□□□ -0.72
NCK1-206ENST00000478862 KRTAP3-3Q9BYR6 98 aa10.51□□□□□ -0.73
NCK1-206ENST00000478862 KRTAP3-2Q9BYR7 98 aa10.51□□□□□ -0.73
NCK1-206ENST00000478862 PKD2Q13563 968 aa10.5□□□□□ -0.73
NCK1-206ENST00000478862 VARS2Q5ST30 1063 aaKnown RBP10.5□□□□□ -0.73
NCK1-206ENST00000478862 MFRPQ9BY79 579 aa10.5□□□□□ -0.73
NCK1-206ENST00000478862 RGL2O15211 777 aa10.48□□□□□ -0.73
NCK1-206ENST00000478862 GPR153Q6NV75 609 aa10.46□□□□□ -0.73
NCK1-206ENST00000478862 TMC2Q8TDI7 906 aa10.45□□□□□ -0.74
NCK1-206ENST00000478862 ARSIQ5FYB1 569 aa10.44□□□□□ -0.74
NCK1-206ENST00000478862 ZNF687Q8N1G0 1237 aa10.42□□□□□ -0.74
NCK1-206ENST00000478862 C2orf72A6NCS6 295 aa10.4□□□□□ -0.74
NCK1-206ENST00000478862 ZNF316A6NFI3 1004 aaPredicted RBP10.37□□□□□ -0.75
NCK1-206ENST00000478862 KIF3CO14782 793 aa10.36□□□□□ -0.75
NCK1-206ENST00000478862 PTGER2P43116 358 aa10.35□□□□□ -0.75
NCK1-206ENST00000478862 AMER1Q5JTC6 1135 aaPredicted RBP10.34□□□□□ -0.75
NCK1-206ENST00000478862 MYT1LQ9UL68 1186 aa10.34□□□□□ -0.75
NCK1-206ENST00000478862 SLC34A2O95436 690 aa10.33□□□□□ -0.76
NCK1-206ENST00000478862 KHSRPQ92945 711 aaKnown RBP eCLIP10.33□□□□□ -0.76
NCK1-206ENST00000478862 RNF166Q96A37 237 aaPredicted RBP10.33□□□□□ -0.76
NCK1-206ENST00000478862 HS6ST3Q8IZP7 471 aa10.32□□□□□ -0.76
NCK1-206ENST00000478862 RTN4Q9NQC3 1192 aaKnown RBP10.32□□□□□ -0.76
NCK1-206ENST00000478862 ANKRD13DQ6ZTN6 518 aa10.31□□□□□ -0.76
NCK1-206ENST00000478862 PCDHGA4Q9Y5G9 962 aa10.31□□□□□ -0.76
NCK1-206ENST00000478862 NUDT7P0C024 238 aa10.3□□□□□ -0.76
NCK1-206ENST00000478862 RYDENQ9NUL5 291 aaKnown RBP10.3□□□□□ -0.76
NCK1-206ENST00000478862 CHGAP10645 457 aaKnown RBP10.29□□□□□ -0.76
NCK1-206ENST00000478862 PBX2P40425 430 aa10.29□□□□□ -0.76
NCK1-206ENST00000478862 PSDA5PKW4 1024 aaPredicted RBP10.28□□□□□ -0.76
NCK1-206ENST00000478862 PPP1R37O75864 691 aa10.28□□□□□ -0.76
NCK1-206ENST00000478862 LSM11P83369 360 aaKnown RBP eCLIP10.26□□□□□ -0.77
NCK1-206ENST00000478862 TBC1D12O60347 775 aa10.25□□□□□ -0.77
NCK1-206ENST00000478862 LHX6Q9UPM6 363 aa10.25□□□□□ -0.77
NCK1-206ENST00000478862 GPHNQ9NQX3 736 aaPredicted RBP10.22□□□□□ -0.77
NCK1-206ENST00000478862 FOXK1P85037 733 aa10.21□□□□□ -0.77
NCK1-206ENST00000478862 PLPP6Q8IY26 295 aa10.21□□□□□ -0.77
NCK1-206ENST00000478862 PTCD2Q8WV60 388 aaKnown RBP10.19□□□□□ -0.78
NCK1-206ENST00000478862 ARHGAP33O14559 1287 aa10.17□□□□□ -0.78
NCK1-206ENST00000478862 KCNH8Q96L42 1107 aa10.17□□□□□ -0.78
NCK1-206ENST00000478862 AXIN2Q9Y2T1 843 aa10.16□□□□□ -0.78
NCK1-206ENST00000478862 DSG2Q14126 1118 aa10.15□□□□□ -0.78
NCK1-206ENST00000478862 PPP4R3BQ5MIZ7 849 aa10.15□□□□□ -0.78
NCK1-206ENST00000478862 DNAJC5Q9H3Z4 198 aa10.15□□□□□ -0.78
NCK1-206ENST00000478862 STAC3Q96MF2 364 aa10.12□□□□□ -0.79
NCK1-206ENST00000478862 DCAF8L2P0C7V8 631 aa10.09□□□□□ -0.79
NCK1-206ENST00000478862 NKX1-1Q15270 411 aaPredicted RBP10.09□□□□□ -0.79
NCK1-206ENST00000478862 ADGRD1Q6QNK2 874 aa10.09□□□□□ -0.79
NCK1-206ENST00000478862 KDM4FA0A1W2PPD8 638 aa10.08□□□□□ -0.8
NCK1-206ENST00000478862 TK2O00142 265 aa10.08□□□□□ -0.8
NCK1-206ENST00000478862 PDE4AP27815 886 aa10.08□□□□□ -0.8
NCK1-206ENST00000478862 HCSTQ9UBK5 93 aa10.08□□□□□ -0.8
NCK1-206ENST00000478862 POTEEQ6S8J3 1075 aa10.07□□□□□ -0.8
NCK1-206ENST00000478862 PPP1R15BQ5SWA1 713 aa10.06□□□□□ -0.8
NCK1-206ENST00000478862 UPF1Q92900 1129 aaKnown RBP eCLIP10.06□□□□□ -0.8
NCK1-206ENST00000478862 CRISPLD2Q9H0B8 497 aa10.05□□□□□ -0.8
NCK1-206ENST00000478862 OXER1Q8TDS5 423 aa10.04□□□□□ -0.8
NCK1-206ENST00000478862 PSEN2P49810 448 aa10.03□□□□□ -0.8
NCK1-206ENST00000478862 KCNK17Q96T54 332 aa10.03□□□□□ -0.8
NCK1-206ENST00000478862 ZNF454Q8N9F8 522 aa10.01□□□□□ -0.81
NCK1-206ENST00000478862 DMRTA1Q5VZB9 504 aa10□□□□□ -0.81
NCK1-206ENST00000478862 LARP6Q9BRS8 491 aaKnown RBP9.99□□□□□ -0.81
NCK1-206ENST00000478862 GTPBP6O43824 516 aaPredicted RBP9.98□□□□□ -0.81
NCK1-206ENST00000478862 DDX27Q96GQ7 796 aaKnown RBP9.98□□□□□ -0.81
NCK1-206ENST00000478862 HRO43593 1189 aa9.96□□□□□ -0.82
NCK1-206ENST00000478862 MAP3K9P80192 1104 aa9.96□□□□□ -0.82
NCK1-206ENST00000478862 PLA2G2EQ9NZK7 142 aa9.96□□□□□ -0.82
NCK1-206ENST00000478862 NCKAP5LQ9HCH0 1330 aa9.96□□□□□ -0.82
NCK1-206ENST00000478862 PTPREP23469 700 aa9.95□□□□□ -0.82
NCK1-206ENST00000478862 KCTD12Q96CX2 325 aaKnown RBP9.95□□□□□ -0.82
NCK1-206ENST00000478862 BCL2L12Q9HB09 334 aa9.95□□□□□ -0.82
NCK1-206ENST00000478862 EVI5O60447 810 aa9.94□□□□□ -0.82
NCK1-206ENST00000478862 JPH4Q96JJ6 628 aa9.93□□□□□ -0.82
NCK1-206ENST00000478862 GOLGA8CPA6NN73 597 aa9.92□□□□□ -0.82
NCK1-206ENST00000478862 FOSBP53539 338 aa9.92□□□□□ -0.82
NCK1-206ENST00000478862 SLC4A5Q9BY07 1137 aa9.92□□□□□ -0.82
NCK1-206ENST00000478862 VPS9D1Q9Y2B5 631 aa9.92□□□□□ -0.82
NCK1-206ENST00000478862 ANO8Q9HCE9 1232 aaPredicted RBP9.91□□□□□ -0.82
NCK1-206ENST00000478862 ZDHHC16Q969W1 377 aa9.9□□□□□ -0.82
NCK1-206ENST00000478862 MFSD10Q14728 455 aa9.88□□□□□ -0.83
NCK1-206ENST00000478862 MRPL50Q8N5N7 158 aaKnown RBP9.87□□□□□ -0.83
NCK1-206ENST00000478862 NBPF3Q9H094 633 aa9.87□□□□□ -0.83
NCK1-206ENST00000478862 PTPN5P54829 565 aa9.85□□□□□ -0.83
NCK1-206ENST00000478862 FBXW7Q969H0 707 aa9.83□□□□□ -0.84
NCK1-206ENST00000478862 ZBED2Q9BTP6 218 aa9.83□□□□□ -0.84
NCK1-206ENST00000478862 ADAM33Q9BZ11 813 aa9.83□□□□□ -0.84
NCK1-206ENST00000478862 WNT2BQ93097 391 aa9.81□□□□□ -0.84
NCK1-206ENST00000478862 BHMG1C9JSJ3 638 aaPredicted RBP9.8□□□□□ -0.84
NCK1-206ENST00000478862 TYW1BQ6NUM6 668 aa9.8□□□□□ -0.84
NCK1-206ENST00000478862 EMILIN3Q9NT22 766 aa9.8□□□□□ -0.84
NCK1-206ENST00000478862 PPP1R3GB7ZBB8 358 aa9.79□□□□□ -0.84
NCK1-206ENST00000478862 PHF14O94880 888 aa9.78□□□□□ -0.84
NCK1-206ENST00000478862 THSD4Q6ZMP0 1018 aa9.78□□□□□ -0.84
NCK1-206ENST00000478862 BBXQ8WY36 941 aaPredicted RBP9.77□□□□□ -0.85
NCK1-206ENST00000478862 PCDHGA10Q9Y5H3 936 aa9.77□□□□□ -0.85
NCK1-206ENST00000478862 CADPS2Q86UW7 1296 aa9.76□□□□□ -0.85
NCK1-206ENST00000478862 EPAS1Q99814 870 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms