RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 FER1L4A9Z1Z3 1794 aa16.05■□□□□ 0.16
CCM2-210ENST00000478169 MYO5CQ9NQX4 1742 aa16.05■□□□□ 0.16
CCM2-210ENST00000478169 CDK11AQ9UQ88 783 aaPredicted RBP16.04■□□□□ 0.16
CCM2-210ENST00000478169 UBTFP17480 764 aaKnown RBP16.03■□□□□ 0.16
CCM2-210ENST00000478169 EFCAB2Q5VUJ9 269 aa16.03■□□□□ 0.16
CCM2-210ENST00000478169 ATP10AO60312 1499 aa16.02■□□□□ 0.15
CCM2-210ENST00000478169 ATP1B4Q9UN42 357 aaPredicted RBP16.01■□□□□ 0.15
CCM2-210ENST00000478169 ARHGAP35Q9NRY4 1499 aa16■□□□□ 0.15
CCM2-210ENST00000478169 HSPA2P54652 639 aa16■□□□□ 0.15
CCM2-210ENST00000478169 MLECQ14165 292 aa16■□□□□ 0.15
CCM2-210ENST00000478169 PLPPR3Q6T4P5 718 aa16■□□□□ 0.15
CCM2-210ENST00000478169 C9orf84Q5VXU9 1444 aa15.99■□□□□ 0.15
CCM2-210ENST00000478169 ARHGEF12Q9NZN5 1544 aa15.99■□□□□ 0.15
CCM2-210ENST00000478169 KIF14Q15058 1648 aa15.98■□□□□ 0.15
CCM2-210ENST00000478169 SETD1BQ9UPS6 1966 aaKnown RBP15.98■□□□□ 0.15
CCM2-210ENST00000478169 ZNF518AQ6AHZ1 1483 aa15.97■□□□□ 0.15
CCM2-210ENST00000478169 TROQ12816 1431 aaPredicted RBP15.96■□□□□ 0.15
CCM2-210ENST00000478169 CLIP1P30622 1438 aa15.95■□□□□ 0.14
CCM2-210ENST00000478169 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
CCM2-210ENST00000478169 PREX1Q8TCU6 1659 aa15.95■□□□□ 0.14
CCM2-210ENST00000478169 ARHGAP5Q13017 1502 aa15.94■□□□□ 0.14
CCM2-210ENST00000478169 LRRIQ1Q96JM4 1722 aa15.94■□□□□ 0.14
CCM2-210ENST00000478169 KDM5CP41229 1560 aa15.94■□□□□ 0.14
CCM2-210ENST00000478169 CDC42BPBQ9Y5S2 1711 aa15.92■□□□□ 0.14
CCM2-210ENST00000478169 AFAP1Q8N556 730 aa15.92■□□□□ 0.14
CCM2-210ENST00000478169 CERKQ8TCT0 537 aa15.91■□□□□ 0.14
CCM2-210ENST00000478169 REREQ9P2R6 1566 aa15.9■□□□□ 0.14
CCM2-210ENST00000478169 DIP2CQ9Y2E4 1556 aa15.89■□□□□ 0.13
CCM2-210ENST00000478169 CEBPAP49715 358 aaPredicted RBP15.88■□□□□ 0.13
CCM2-210ENST00000478169 MYT1LQ9UL68 1186 aa15.88■□□□□ 0.13
CCM2-210ENST00000478169 MLH3Q9UHC1 1453 aa15.88■□□□□ 0.13
CCM2-210ENST00000478169 PREX2Q70Z35 1606 aa15.87■□□□□ 0.13
CCM2-210ENST00000478169 CCDC18Q5T9S5 1454 aa15.87■□□□□ 0.13
CCM2-210ENST00000478169 STRCQ7RTU9 1775 aa15.86■□□□□ 0.13
CCM2-210ENST00000478169 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
CCM2-210ENST00000478169 CASKIN1Q8WXD9 1431 aa15.85■□□□□ 0.13
CCM2-210ENST00000478169 ABCA6Q8N139 1617 aa15.85■□□□□ 0.13
CCM2-210ENST00000478169 ITSN2Q9NZM3 1697 aa15.85■□□□□ 0.13
CCM2-210ENST00000478169 UHRF1BP1Q6BDS2 1440 aa15.85■□□□□ 0.13
CCM2-210ENST00000478169 ABCC1P33527 1531 aa15.84■□□□□ 0.13
CCM2-210ENST00000478169 AGLP35573 1532 aa15.84■□□□□ 0.13
CCM2-210ENST00000478169 C3P01024 1663 aa15.83■□□□□ 0.13
CCM2-210ENST00000478169 CDC42BPAQ5VT25 1732 aa15.83■□□□□ 0.13
CCM2-210ENST00000478169 TRAPPC8Q9Y2L5 1435 aa15.83■□□□□ 0.12
CCM2-210ENST00000478169 ESF1Q9H501 851 aaKnown RBP15.81■□□□□ 0.12
CCM2-210ENST00000478169 KIDINS220Q9ULH0 1771 aa15.81■□□□□ 0.12
CCM2-210ENST00000478169 CNTLNQ9NXG0 1405 aa15.78■□□□□ 0.12
CCM2-210ENST00000478169 FYCO1Q9BQS8 1478 aa15.78■□□□□ 0.12
CCM2-210ENST00000478169 PTPRTO14522 1441 aa15.77■□□□□ 0.11
CCM2-210ENST00000478169 SAMD9LQ8IVG5 1584 aa15.75■□□□□ 0.11
CCM2-210ENST00000478169 MROH2AA6NES4 1674 aa15.74■□□□□ 0.11
CCM2-210ENST00000478169 GPATCH8Q9UKJ3 1502 aaKnown RBP15.73■□□□□ 0.11
CCM2-210ENST00000478169 ZNF777Q9ULD5 760 aaPredicted RBP15.73■□□□□ 0.11
CCM2-210ENST00000478169 SPAG9O60271 1321 aaKnown RBP15.71■□□□□ 0.11
CCM2-210ENST00000478169 NPATQ14207 1427 aa15.71■□□□□ 0.11
CCM2-210ENST00000478169 SYCP2Q9BX26 1530 aa15.71■□□□□ 0.11
CCM2-210ENST00000478169 SUPT6HQ7KZ85 1726 aaKnown RBP15.71■□□□□ 0.1
CCM2-210ENST00000478169 KIAA1107Q9UPP5 1409 aa15.7■□□□□ 0.1
CCM2-210ENST00000478169 PLEKHH2Q8IVE3 1493 aa15.7■□□□□ 0.1
CCM2-210ENST00000478169 NCOA1Q15788 1441 aa15.69■□□□□ 0.1
CCM2-210ENST00000478169 HNRNPMP52272 730 aaKnown RBP eCLIP15.69■□□□□ 0.12e-6■■■□□ 15.7
CCM2-210ENST00000478169 ZMYM3Q14202 1370 aa15.69■□□□□ 0.1
CCM2-210ENST00000478169 ATP7AQ04656 1500 aa15.68■□□□□ 0.1
CCM2-210ENST00000478169 CFDP1Q9UEE9 299 aaPredicted RBP15.68■□□□□ 0.1
CCM2-210ENST00000478169 LTBP4Q8N2S1 1624 aa15.68■□□□□ 0.1
CCM2-210ENST00000478169 IQSEC2Q5JU85 1478 aa15.67■□□□□ 0.1
CCM2-210ENST00000478169 CCNB3Q8WWL7 1395 aa15.67■□□□□ 0.1
CCM2-210ENST00000478169 PLXNC1O60486 1568 aa15.66■□□□□ 0.1
CCM2-210ENST00000478169 INO80Q9ULG1 1556 aaPredicted RBP15.66■□□□□ 0.1
CCM2-210ENST00000478169 CAMSAP1Q5T5Y3 1602 aa15.66■□□□□ 0.1
CCM2-210ENST00000478169 CLTCQ00610 1675 aaKnown RBP15.66■□□□□ 0.1
CCM2-210ENST00000478169 A2MP01023 1474 aa15.65■□□□□ 0.1
CCM2-210ENST00000478169 PPP6R1Q9UPN7 881 aa15.64■□□□□ 0.09
CCM2-210ENST00000478169 ADGBQ8N7X0 1667 aa15.63■□□□□ 0.09
CCM2-210ENST00000478169 MTUS2Q5JR59 1369 aa15.63■□□□□ 0.09
CCM2-210ENST00000478169 ZNF142P52746 1687 aaPredicted RBP15.63■□□□□ 0.09
CCM2-210ENST00000478169 DISP3Q9P2K9 1392 aa15.62■□□□□ 0.09
CCM2-210ENST00000478169 MYO3AQ8NEV4 1616 aa15.61■□□□□ 0.09
CCM2-210ENST00000478169 PTPRKQ15262 1439 aa15.6■□□□□ 0.09
CCM2-210ENST00000478169 PLA2R1Q13018 1463 aa15.6■□□□□ 0.09
CCM2-210ENST00000478169 PKD2Q13563 968 aa15.6■□□□□ 0.09
CCM2-210ENST00000478169 GGT6Q6P531 493 aa15.6■□□□□ 0.09
CCM2-210ENST00000478169 SENP3Q9H4L4 574 aaPredicted RBP15.6■□□□□ 0.09
CCM2-210ENST00000478169 NCKAP5LQ9HCH0 1330 aa15.59■□□□□ 0.09
CCM2-210ENST00000478169 TIAM1Q13009 1591 aa15.58■□□□□ 0.09
CCM2-210ENST00000478169 CEP170BQ9Y4F5 1589 aaPredicted RBP15.58■□□□□ 0.09
CCM2-210ENST00000478169 RTEL1-TNFRSF6BF6WH68 1400 aa15.58■□□□□ 0.08
CCM2-210ENST00000478169 EHBP1L1Q8N3D4 1523 aa15.58■□□□□ 0.08
CCM2-210ENST00000478169 MBD5Q9P267 1494 aa15.57■□□□□ 0.08
CCM2-210ENST00000478169 ILDR2Q71H61 639 aa15.56■□□□□ 0.08
CCM2-210ENST00000478169 ZNF644Q9H582 1327 aaPredicted RBP15.56■□□□□ 0.08
CCM2-210ENST00000478169 TCOF1Q13428 1488 aaKnown RBP15.56■□□□□ 0.08
CCM2-210ENST00000478169 SPATA31D1Q6ZQQ2 1576 aa15.55■□□□□ 0.08
CCM2-210ENST00000478169 CEP162Q5TB80 1403 aa15.55■□□□□ 0.08
CCM2-210ENST00000478169 DHX29Q7Z478 1369 aaKnown RBP15.54■□□□□ 0.08
CCM2-210ENST00000478169 ZNF335Q9H4Z2 1342 aaPredicted RBP15.54■□□□□ 0.08
CCM2-210ENST00000478169 SOCS7O14512 581 aa15.54■□□□□ 0.08
CCM2-210ENST00000478169 A2ML1A8K2U0 1454 aa15.53■□□□□ 0.08
CCM2-210ENST00000478169 RSPH4AQ5TD94 716 aa15.52■□□□□ 0.08
CCM2-210ENST00000478169 DNMT1P26358 1616 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms