RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 CEP162Q5TB80 1403 aa36.64■■■■□ 3.46
CNIH4-208ENST00000477413 CDC42BPBQ9Y5S2 1711 aa36.62■■■■□ 3.45
CNIH4-208ENST00000477413 ADAMTSL3P82987 1691 aa36.59■■■■□ 3.45
CNIH4-208ENST00000477413 ARHGAP5Q13017 1502 aa36.59■■■■□ 3.45
CNIH4-208ENST00000477413 SCAPERQ9BY12 1400 aa36.59■■■■□ 3.45
CNIH4-208ENST00000477413 EFCAB2Q5VUJ9 269 aa36.58■■■■□ 3.45
CNIH4-208ENST00000477413 ZFYVE16Q7Z3T8 1539 aa36.57■■■■□ 3.44
CNIH4-208ENST00000477413 BCORL1Q5H9F3 1711 aa36.55■■■■□ 3.44
CNIH4-208ENST00000477413 CDC42BPAQ5VT25 1732 aa36.55■■■■□ 3.44
CNIH4-208ENST00000477413 KDM5CP41229 1560 aa36.54■■■■□ 3.44
CNIH4-208ENST00000477413 ZNF518AQ6AHZ1 1483 aa36.51■■■■□ 3.44
CNIH4-208ENST00000477413 YEATS2Q9ULM3 1422 aa36.49■■■■□ 3.43
CNIH4-208ENST00000477413 ABCC1P33527 1531 aa36.49■■■■□ 3.43
CNIH4-208ENST00000477413 SIGLEC1Q9BZZ2 1709 aa36.45■■■■□ 3.43
CNIH4-208ENST00000477413 ITSN2Q9NZM3 1697 aa36.42■■■■□ 3.42
CNIH4-208ENST00000477413 EHBP1L1Q8N3D4 1523 aa36.4■■■■□ 3.42
CNIH4-208ENST00000477413 HECW2Q9P2P5 1572 aa36.4■■■■□ 3.42
CNIH4-208ENST00000477413 MADDQ8WXG6 1647 aa36.38■■■■□ 3.41
CNIH4-208ENST00000477413 GPATCH8Q9UKJ3 1502 aaKnown RBP36.38■■■■□ 3.41
CNIH4-208ENST00000477413 ARHGEF12Q9NZN5 1544 aa36.36■■■■□ 3.41
CNIH4-208ENST00000477413 PTPRMP28827 1452 aa36.35■■■■□ 3.41
CNIH4-208ENST00000477413 ATP10AO60312 1499 aa36.34■■■■□ 3.41
CNIH4-208ENST00000477413 MLH3Q9UHC1 1453 aa36.34■■■■□ 3.41
CNIH4-208ENST00000477413 REREQ9P2R6 1566 aa36.34■■■■□ 3.41
CNIH4-208ENST00000477413 C9orf84Q5VXU9 1444 aa36.34■■■■□ 3.41
CNIH4-208ENST00000477413 SAMD9LQ8IVG5 1584 aa36.33■■■■□ 3.41
CNIH4-208ENST00000477413 MTUS2Q5JR59 1369 aa36.32■■■■□ 3.4
CNIH4-208ENST00000477413 DIP2CQ9Y2E4 1556 aa36.3■■■■□ 3.4
CNIH4-208ENST00000477413 VPS8Q8N3P4 1428 aa36.28■■■■□ 3.4
CNIH4-208ENST00000477413 TIAM1Q13009 1591 aa36.27■■■■□ 3.4
CNIH4-208ENST00000477413 TRAPPC8Q9Y2L5 1435 aa36.27■■■■□ 3.4
CNIH4-208ENST00000477413 ARID4BQ4LE39 1312 aaPredicted RBP36.26■■■■□ 3.39
CNIH4-208ENST00000477413 ABCA6Q8N139 1617 aa36.26■■■■□ 3.39
CNIH4-208ENST00000477413 LOC105371045A0A1W2PR82 267 aa36.24■■■■□ 3.39
CNIH4-208ENST00000477413 AFAP1Q8N556 730 aa36.24■■■■□ 3.39
CNIH4-208ENST00000477413 RIMS1Q86UR5 1692 aaKnown RBP36.23■■■■□ 3.39
CNIH4-208ENST00000477413 KIAA1107Q9UPP5 1409 aa36.23■■■■□ 3.39
CNIH4-208ENST00000477413 PLEKHH2Q8IVE3 1493 aa36.23■■■■□ 3.39
CNIH4-208ENST00000477413 SYCP2Q9BX26 1530 aa36.23■■■■□ 3.39
CNIH4-208ENST00000477413 KIDINS220Q9ULH0 1771 aa36.22■■■■□ 3.39
CNIH4-208ENST00000477413 CCNB3Q8WWL7 1395 aa36.21■■■■□ 3.39
CNIH4-208ENST00000477413 FER1L4A9Z1Z3 1794 aa36.19■■■■□ 3.38
CNIH4-208ENST00000477413 SUPT6HQ7KZ85 1726 aaKnown RBP36.17■■■■□ 3.38
CNIH4-208ENST00000477413 MAP3K1Q13233 1512 aa36.16■■■■□ 3.38
CNIH4-208ENST00000477413 AGLP35573 1532 aa36.15■■■■□ 3.38
CNIH4-208ENST00000477413 INO80Q9ULG1 1556 aaPredicted RBP36.11■■■■□ 3.37
CNIH4-208ENST00000477413 CFDP1Q9UEE9 299 aaPredicted RBP36.11■■■■□ 3.37
CNIH4-208ENST00000477413 NCOA2Q15596 1464 aa36.09■■■■□ 3.37
CNIH4-208ENST00000477413 LRRC9Q6ZRR7 1453 aa36.05■■■■□ 3.36
CNIH4-208ENST00000477413 ATP7AQ04656 1500 aa36.05■■■■□ 3.36
CNIH4-208ENST00000477413 MBD5Q9P267 1494 aa36.03■■■■□ 3.36
CNIH4-208ENST00000477413 ZNF777Q9ULD5 760 aaPredicted RBP36.02■■■■□ 3.36
CNIH4-208ENST00000477413 PLXNC1O60486 1568 aa36■■■■□ 3.35
CNIH4-208ENST00000477413 LMTK3Q96Q04 1460 aa35.99■■■■□ 3.35
CNIH4-208ENST00000477413 HNRNPMP52272 730 aaKnown RBP eCLIP35.97■■■■□ 3.35
CNIH4-208ENST00000477413 SPAG9O60271 1321 aaKnown RBP35.96■■■■□ 3.35
CNIH4-208ENST00000477413 MLECQ14165 292 aa35.93■■■■□ 3.34
CNIH4-208ENST00000477413 MYT1LQ9UL68 1186 aa35.93■■■■□ 3.34
CNIH4-208ENST00000477413 CAMSAP2Q08AD1 1489 aa35.92■■■■□ 3.34
CNIH4-208ENST00000477413 ADGBQ8N7X0 1667 aa35.91■■■■□ 3.34
CNIH4-208ENST00000477413 ZNF644Q9H582 1327 aaPredicted RBP35.9■■■■□ 3.34
CNIH4-208ENST00000477413 RTEL1-TNFRSF6BF6WH68 1400 aa35.9■■■■□ 3.34
CNIH4-208ENST00000477413 ARHGEF5Q12774 1597 aa35.88■■■■□ 3.33
CNIH4-208ENST00000477413 CCDC141Q6ZP82 1450 aa35.86■■■■□ 3.33
CNIH4-208ENST00000477413 A2MP01023 1474 aa35.86■■■■□ 3.33
CNIH4-208ENST00000477413 PREX1Q8TCU6 1659 aa35.83■■■■□ 3.33
CNIH4-208ENST00000477413 MROH2AA6NES4 1674 aa35.82■■■■□ 3.33
CNIH4-208ENST00000477413 CNTLNQ9NXG0 1405 aa35.82■■■■□ 3.32
CNIH4-208ENST00000477413 C3P01024 1663 aa35.81■■■■□ 3.32
CNIH4-208ENST00000477413 MIA2Q96PC5 1412 aa35.78■■■■□ 3.32
CNIH4-208ENST00000477413 KANK4Q5T7N3 995 aaPredicted RBP35.78■■■■□ 3.32
CNIH4-208ENST00000477413 RSPH4AQ5TD94 716 aa35.78■■■■□ 3.32
CNIH4-208ENST00000477413 SETD1BQ9UPS6 1966 aaKnown RBP35.76■■■■□ 3.32
CNIH4-208ENST00000477413 MYOM3Q5VTT5 1437 aa35.76■■■■□ 3.32
CNIH4-208ENST00000477413 MAST1Q9Y2H9 1570 aa35.72■■■■□ 3.31
CNIH4-208ENST00000477413 DHX29Q7Z478 1369 aaKnown RBP35.66■■■■□ 3.3
CNIH4-208ENST00000477413 FAM135AQ9P2D6 1515 aa35.65■■■■□ 3.3
CNIH4-208ENST00000477413 CEBPAP49715 358 aaPredicted RBP35.64■■■■□ 3.3
CNIH4-208ENST00000477413 NPATQ14207 1427 aa35.62■■■■□ 3.29
CNIH4-208ENST00000477413 CLTCQ00610 1675 aaKnown RBP35.62■■■■□ 3.29
CNIH4-208ENST00000477413 UHRF1BP1Q6BDS2 1440 aa35.61■■■■□ 3.29
CNIH4-208ENST00000477413 ESF1Q9H501 851 aaKnown RBP35.61■■■■□ 3.29
CNIH4-208ENST00000477413 PPP6R1Q9UPN7 881 aa35.61■■■■□ 3.29
CNIH4-208ENST00000477413 PLPPR3Q6T4P5 718 aa35.59■■■■□ 3.29
CNIH4-208ENST00000477413 APLP2Q06481 763 aa35.57■■■■□ 3.28
CNIH4-208ENST00000477413 CROCC2H7BZ55 1655 aa35.55■■■■□ 3.28
CNIH4-208ENST00000477413 PTPN23Q9H3S7 1636 aa35.54■■■■□ 3.28
CNIH4-208ENST00000477413 ZMYM3Q14202 1370 aa35.54■■■■□ 3.28
CNIH4-208ENST00000477413 HSPA2P54652 639 aa35.54■■■■□ 3.28
CNIH4-208ENST00000477413 TCOF1Q13428 1488 aaKnown RBP35.53■■■■□ 3.28
CNIH4-208ENST00000477413 SHANK2Q9UPX8 1470 aa35.53■■■■□ 3.28
CNIH4-208ENST00000477413 EIF2AK4Q9P2K8 1649 aaKnown RBP35.51■■■■□ 3.28
CNIH4-208ENST00000477413 TSPY4P0CV99 314 aa35.51■■■■□ 3.28
CNIH4-208ENST00000477413 TSPY10P0CW01 314 aa35.51■■■■□ 3.28
CNIH4-208ENST00000477413 RNF17Q9BXT8 1623 aaKnown RBP35.5■■■■□ 3.27
CNIH4-208ENST00000477413 FGD6Q6ZV73 1430 aa35.49■■■■□ 3.27
CNIH4-208ENST00000477413 KDM5DQ9BY66 1539 aa35.48■■■■□ 3.27
CNIH4-208ENST00000477413 ZNF142P52746 1687 aaPredicted RBP35.47■■■■□ 3.27
CNIH4-208ENST00000477413 STRCQ7RTU9 1775 aa35.46■■■■□ 3.27
CNIH4-208ENST00000477413 PTPRKQ15262 1439 aa35.46■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms