RNA–Protein interactions for RNA: ENST00000477148.1

TFRC-212, Transcript of transferrin receptor, humanhuman

TSL 4

Gene TFRC, Length 570 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-212ENST00000477148 CADPS2Q86UW7 1296 aa14.49□□□□□ -0.09
TFRC-212ENST00000477148 TMC2Q8TDI7 906 aa14.46□□□□□ -0.09
TFRC-212ENST00000477148 PDE4AP27815 886 aa14.45□□□□□ -0.1
TFRC-212ENST00000477148 VSIG10Q8N0Z9 540 aa14.41□□□□□ -0.1
TFRC-212ENST00000477148 CRISPLD2Q9H0B8 497 aa14.41□□□□□ -0.1
TFRC-212ENST00000477148 NCKAP5LQ9HCH0 1330 aa14.41□□□□□ -0.1
TFRC-212ENST00000477148 GPHNQ9NQX3 736 aaPredicted RBP14.4□□□□□ -0.1
TFRC-212ENST00000477148 TMEM92Q6UXU6 159 aa14.38□□□□□ -0.11
TFRC-212ENST00000477148 SLAIN1Q8ND83 568 aa14.38□□□□□ -0.11
TFRC-212ENST00000477148 LARP6Q9BRS8 491 aaKnown RBP14.38□□□□□ -0.11
TFRC-212ENST00000477148 C2orf72A6NCS6 295 aa14.37□□□□□ -0.11
TFRC-212ENST00000477148 WDR70Q9NW82 654 aa14.37□□□□□ -0.11
TFRC-212ENST00000477148 KIF3CO14782 793 aa14.35□□□□□ -0.11
TFRC-212ENST00000477148 OTUD5Q96G74 571 aa14.35□□□□□ -0.11
TFRC-212ENST00000477148 DDX27Q96GQ7 796 aaKnown RBP14.35□□□□□ -0.11
TFRC-212ENST00000477148 MFSD10Q14728 455 aa14.32□□□□□ -0.12
TFRC-212ENST00000477148 PPP1R15BQ5SWA1 713 aa14.31□□□□□ -0.12
TFRC-212ENST00000477148 FOXK1P85037 733 aa14.3□□□□□ -0.12
TFRC-212ENST00000477148 KDM2AQ9Y2K7 1162 aa14.3□□□□□ -0.12
TFRC-212ENST00000477148 DSG2Q14126 1118 aa14.29□□□□□ -0.12
TFRC-212ENST00000477148 PLPP6Q8IY26 295 aa14.26□□□□□ -0.13
TFRC-212ENST00000477148 SNPHO15079 494 aa14.2□□□□□ -0.14
TFRC-212ENST00000477148 E2F4Q16254 413 aa14.19□□□□□ -0.14
TFRC-212ENST00000477148 DOK7Q18PE1 504 aa14.17□□□□□ -0.14
TFRC-212ENST00000477148 P3H3Q8IVL6 736 aa14.17□□□□□ -0.14
TFRC-212ENST00000477148 CAMK2BQ13554 666 aa14.15□□□□□ -0.14
TFRC-212ENST00000477148 RIMBP2O15034 1052 aa14.13□□□□□ -0.15
TFRC-212ENST00000477148 SLC34A2O95436 690 aa14.12□□□□□ -0.15
TFRC-212ENST00000477148 HOXB3P14651 431 aaPredicted RBP14.11□□□□□ -0.15
TFRC-212ENST00000477148 ZNF710Q8N1W2 664 aa14.11□□□□□ -0.15
TFRC-212ENST00000477148 KCNV2Q8TDN2 545 aa14.09□□□□□ -0.15
TFRC-212ENST00000477148 UPF1Q92900 1129 aaKnown RBP eCLIP14.09□□□□□ -0.15
TFRC-212ENST00000477148 TBC1D12O60347 775 aa14.08□□□□□ -0.16
TFRC-212ENST00000477148 EMILIN3Q9NT22 766 aa14.08□□□□□ -0.16
TFRC-212ENST00000477148 PTCD2Q8WV60 388 aaKnown RBP14.07□□□□□ -0.16
TFRC-212ENST00000477148 OXER1Q8TDS5 423 aa14.06□□□□□ -0.16
TFRC-212ENST00000477148 ZSWIM6Q9HCJ5 1215 aa14.06□□□□□ -0.16
TFRC-212ENST00000477148 MAP3K9P80192 1104 aa14.04□□□□□ -0.16
TFRC-212ENST00000477148 ARHGEF1Q92888 912 aaKnown RBP14.04□□□□□ -0.16
TFRC-212ENST00000477148 ARIH1Q9Y4X5 557 aaPredicted RBP14.03□□□□□ -0.16
TFRC-212ENST00000477148 PCDHGA4Q9Y5G9 962 aa14.03□□□□□ -0.16
TFRC-212ENST00000477148 DPYSL4O14531 572 aa14.02□□□□□ -0.17
TFRC-212ENST00000477148 ZNF316A6NFI3 1004 aaPredicted RBP14.01□□□□□ -0.17
TFRC-212ENST00000477148 ARSIQ5FYB1 569 aa13.97□□□□□ -0.17
TFRC-212ENST00000477148 FAM163AQ96GL9 167 aaPredicted RBP13.97□□□□□ -0.17
TFRC-212ENST00000477148 SPDYE16A6NNV3 312 aaPredicted RBP13.95□□□□□ -0.18
TFRC-212ENST00000477148 GPR153Q6NV75 609 aa13.95□□□□□ -0.18
TFRC-212ENST00000477148 HOXB1P14653 301 aaPredicted RBP13.94□□□□□ -0.18
TFRC-212ENST00000477148 ST18O60284 1047 aa13.93□□□□□ -0.18
TFRC-212ENST00000477148 EVI5O60447 810 aa13.93□□□□□ -0.18
TFRC-212ENST00000477148 PDIA6Q15084 440 aa13.93□□□□□ -0.18
TFRC-212ENST00000477148 NUDT7P0C024 238 aa13.91□□□□□ -0.18
TFRC-212ENST00000477148 NBR1Q14596 966 aa13.91□□□□□ -0.18
TFRC-212ENST00000477148 KHSRPQ92945 711 aaKnown RBP eCLIP13.91□□□□□ -0.189e-24■■□□□ 11.4
TFRC-212ENST00000477148 ANO8Q9HCE9 1232 aaPredicted RBP13.85□□□□□ -0.19
TFRC-212ENST00000477148 KDM4FA0A1W2PPD8 638 aa13.84□□□□□ -0.19
TFRC-212ENST00000477148 EMP3P54852 163 aa13.84□□□□□ -0.19
TFRC-212ENST00000477148 BCANQ96GW7 911 aa13.82□□□□□ -0.2
TFRC-212ENST00000477148 MARVELD3Q96A59 401 aa13.81□□□□□ -0.2
TFRC-212ENST00000477148 SEMA3EO15041 775 aa13.8□□□□□ -0.2
TFRC-212ENST00000477148 LHX6Q9UPM6 363 aa13.8□□□□□ -0.2
TFRC-212ENST00000477148 PSDA5PKW4 1024 aaPredicted RBP13.79□□□□□ -0.2
TFRC-212ENST00000477148 PTGER2P43116 358 aa13.79□□□□□ -0.2
TFRC-212ENST00000477148 LCE2DQ5TA82 110 aaPredicted RBP13.79□□□□□ -0.2
TFRC-212ENST00000477148 ERBB3P21860 1342 aa13.78□□□□□ -0.2
TFRC-212ENST00000477148 DDX12PQ92771 950 aa13.77□□□□□ -0.21
TFRC-212ENST00000477148 JPH4Q96JJ6 628 aa13.76□□□□□ -0.21
TFRC-212ENST00000477148 TESPA1A2RU30 521 aaPredicted RBP13.75□□□□□ -0.21
TFRC-212ENST00000477148 GRXCR2A6NFK2 248 aa13.75□□□□□ -0.21
TFRC-212ENST00000477148 TULP1O00294 542 aaPredicted RBP13.75□□□□□ -0.21
TFRC-212ENST00000477148 SMYD5Q6GMV2 418 aa13.75□□□□□ -0.21
TFRC-212ENST00000477148 ZNF454Q8N9F8 522 aa13.75□□□□□ -0.21
TFRC-212ENST00000477148 PHF14O94880 888 aa13.73□□□□□ -0.21
TFRC-212ENST00000477148 MLLT3P42568 568 aaPredicted RBP13.73□□□□□ -0.21
TFRC-212ENST00000477148 FOSBP53539 338 aa13.73□□□□□ -0.21
TFRC-212ENST00000477148 PPP4R3BQ5MIZ7 849 aa13.73□□□□□ -0.21
TFRC-212ENST00000477148 EPAS1Q99814 870 aa13.73□□□□□ -0.21
TFRC-212ENST00000477148 FAM205CA6NFA0 338 aa13.72□□□□□ -0.21
TFRC-212ENST00000477148 VARS2Q5ST30 1063 aaKnown RBP13.72□□□□□ -0.21
TFRC-212ENST00000477148 TYW1BQ6NUM6 668 aa13.7□□□□□ -0.22
TFRC-212ENST00000477148 FBXW7Q969H0 707 aa13.7□□□□□ -0.22
TFRC-212ENST00000477148 PCDHGA10Q9Y5H3 936 aa13.7□□□□□ -0.22
TFRC-212ENST00000477148 ZDHHC16Q969W1 377 aa13.68□□□□□ -0.22
TFRC-212ENST00000477148 HS3ST6Q96QI5 342 aa13.66□□□□□ -0.22
TFRC-212ENST00000477148 OSBPP22059 807 aa13.64□□□□□ -0.23
TFRC-212ENST00000477148 MAP3K7O43318 606 aa13.62□□□□□ -0.23
TFRC-212ENST00000477148 EN1Q05925 392 aaPredicted RBP13.62□□□□□ -0.23
TFRC-212ENST00000477148 POTEGQ6S5H5 508 aa13.62□□□□□ -0.23
TFRC-212ENST00000477148 RBM33Q96EV2 1170 aaKnown RBP13.62□□□□□ -0.23
TFRC-212ENST00000477148 KCNH8Q96L42 1107 aa13.6□□□□□ -0.23
TFRC-212ENST00000477148 ADAM33Q9BZ11 813 aa13.6□□□□□ -0.23
TFRC-212ENST00000477148 BCL2L12Q9HB09 334 aa13.6□□□□□ -0.23
TFRC-212ENST00000477148 POTEMA6NI47 508 aa13.59□□□□□ -0.23
TFRC-212ENST00000477148 ZNF687Q8N1G0 1237 aa13.59□□□□□ -0.23
TFRC-212ENST00000477148 POTEB3A0JP26 581 aa13.58□□□□□ -0.24
TFRC-212ENST00000477148 POTEBQ6S5H4 581 aa13.58□□□□□ -0.24
TFRC-212ENST00000477148 PTPREP23469 700 aa13.56□□□□□ -0.24
TFRC-212ENST00000477148 PBX2P40425 430 aa13.56□□□□□ -0.24
TFRC-212ENST00000477148 PRIM1P49642 420 aaKnown RBP13.56□□□□□ -0.24
TFRC-212ENST00000477148 RBM26Q5T8P6 1007 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms