RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 ATP10BO94823 1461 aa16.66■□□□□ 0.26
NUP188-205ENST00000477069 KDM5BQ9UGL1 1544 aa16.65■□□□□ 0.26
NUP188-205ENST00000477069 NEUROD1Q13562 356 aa16.65■□□□□ 0.26
NUP188-205ENST00000477069 RRP7BPQ9NSQ0 103 aa16.65■□□□□ 0.26
NUP188-205ENST00000477069 ABCC10Q5T3U5 1492 aa16.65■□□□□ 0.26
NUP188-205ENST00000477069 CHIC2Q9UKJ5 165 aa16.63■□□□□ 0.25
NUP188-205ENST00000477069 ZNF644Q9H582 1327 aaPredicted RBP16.62■□□□□ 0.25
NUP188-205ENST00000477069 ACIN1Q9UKV3 1341 aaKnown RBP16.62■□□□□ 0.25
NUP188-205ENST00000477069 PPP1R15AO75807 674 aaPredicted RBP16.61■□□□□ 0.25
NUP188-205ENST00000477069 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
NUP188-205ENST00000477069 ADGRL2O95490 1459 aa16.6■□□□□ 0.25
NUP188-205ENST00000477069 PTPRGP23470 1445 aa16.58■□□□□ 0.24
NUP188-205ENST00000477069 CLASP1Q7Z460 1538 aa16.57■□□□□ 0.24
NUP188-205ENST00000477069 TONSLQ96HA7 1378 aa16.56■□□□□ 0.24
NUP188-205ENST00000477069 ERCC6L2Q5T890 1561 aa16.56■□□□□ 0.24
NUP188-205ENST00000477069 CENPBP07199 599 aaPredicted RBP16.56■□□□□ 0.24
NUP188-205ENST00000477069 CFDP1Q9UEE9 299 aaPredicted RBP16.55■□□□□ 0.24
NUP188-205ENST00000477069 PREX2Q70Z35 1606 aa16.54■□□□□ 0.24
NUP188-205ENST00000477069 SHANK2Q9UPX8 1470 aa16.54■□□□□ 0.24
NUP188-205ENST00000477069 NCOA1Q15788 1441 aa16.54■□□□□ 0.24
NUP188-205ENST00000477069 CDC42BPBQ9Y5S2 1711 aa16.54■□□□□ 0.24
NUP188-205ENST00000477069 PLEKHD1A6NEE1 506 aa16.52■□□□□ 0.24
NUP188-205ENST00000477069 MPHOSPH9Q99550 1183 aa16.52■□□□□ 0.24
NUP188-205ENST00000477069 ARHGEF5Q12774 1597 aa16.52■□□□□ 0.23
NUP188-205ENST00000477069 ABCC2Q92887 1545 aa16.51■□□□□ 0.23
NUP188-205ENST00000477069 PZPP20742 1482 aa16.5■□□□□ 0.23
NUP188-205ENST00000477069 TRIM52Q96A61 297 aa16.49■□□□□ 0.23
NUP188-205ENST00000477069 SAMD9LQ8IVG5 1584 aa16.49■□□□□ 0.23
NUP188-205ENST00000477069 ANKRD30BQ9BXX2 1392 aa16.47■□□□□ 0.23
NUP188-205ENST00000477069 TTC37Q6PGP7 1564 aa16.47■□□□□ 0.23
NUP188-205ENST00000477069 RPRD2Q5VT52 1461 aaKnown RBP16.46■□□□□ 0.23
NUP188-205ENST00000477069 MBD5Q9P267 1494 aa16.46■□□□□ 0.23
NUP188-205ENST00000477069 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.45■□□□□ 0.221e-6■■■■■ 29.5
NUP188-205ENST00000477069 ANKRD30AQ9BXX3 1397 aa16.45■□□□□ 0.22
NUP188-205ENST00000477069 TEX14Q8IWB6 1497 aa16.44■□□□□ 0.22
NUP188-205ENST00000477069 C9orf84Q5VXU9 1444 aa16.44■□□□□ 0.22
NUP188-205ENST00000477069 ZCCHC11Q5TAX3 1644 aaKnown RBP16.43■□□□□ 0.22
NUP188-205ENST00000477069 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
NUP188-205ENST00000477069 ZNF777Q9ULD5 760 aaPredicted RBP16.43■□□□□ 0.22
NUP188-205ENST00000477069 MYO5CQ9NQX4 1742 aa16.43■□□□□ 0.22
NUP188-205ENST00000477069 KDM5DQ9BY66 1539 aa16.43■□□□□ 0.22
NUP188-205ENST00000477069 UHRF1BP1LA0JNW5 1464 aa16.43■□□□□ 0.22
NUP188-205ENST00000477069 DNAJC5Q9H3Z4 198 aa16.42■□□□□ 0.22
NUP188-205ENST00000477069 ANKRD50Q9ULJ7 1429 aa16.41■□□□□ 0.22
NUP188-205ENST00000477069 MAST1Q9Y2H9 1570 aa16.4■□□□□ 0.22
NUP188-205ENST00000477069 FOXD1Q16676 465 aa16.4■□□□□ 0.22
NUP188-205ENST00000477069 CCDC141Q6ZP82 1450 aa16.39■□□□□ 0.21
NUP188-205ENST00000477069 KIAA1107Q9UPP5 1409 aa16.37■□□□□ 0.21
NUP188-205ENST00000477069 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
NUP188-205ENST00000477069 SYCP2Q9BX26 1530 aa16.36■□□□□ 0.21
NUP188-205ENST00000477069 HIRIP3Q9BW71 556 aaPredicted RBP16.36■□□□□ 0.21
NUP188-205ENST00000477069 DDX10Q13206 875 aaKnown RBP16.35■□□□□ 0.21
NUP188-205ENST00000477069 L3MBTL2Q969R5 705 aa16.35■□□□□ 0.21
NUP188-205ENST00000477069 ARHGAP5Q13017 1502 aa16.35■□□□□ 0.21
NUP188-205ENST00000477069 GTF3C3Q9Y5Q9 886 aa16.35■□□□□ 0.21
NUP188-205ENST00000477069 PLXNC1O60486 1568 aa16.34■□□□□ 0.21
NUP188-205ENST00000477069 KIF15Q9NS87 1388 aa16.33■□□□□ 0.2
NUP188-205ENST00000477069 HNRNPMP52272 730 aaKnown RBP eCLIP16.32■□□□□ 0.2
NUP188-205ENST00000477069 UNC13BO14795 1591 aa16.32■□□□□ 0.2
NUP188-205ENST00000477069 POLR1AO95602 1720 aaPredicted RBP16.32■□□□□ 0.2
NUP188-205ENST00000477069 PLEKHH2Q8IVE3 1493 aa16.3■□□□□ 0.2
NUP188-205ENST00000477069 TSPY4P0CV99 314 aa16.3■□□□□ 0.2
NUP188-205ENST00000477069 TSPY10P0CW01 314 aa16.3■□□□□ 0.2
NUP188-205ENST00000477069 RSPH4AQ5TD94 716 aa16.3■□□□□ 0.2
NUP188-205ENST00000477069 ARHGEF12Q9NZN5 1544 aa16.29■□□□□ 0.2
NUP188-205ENST00000477069 PLCH2O75038 1416 aa16.28■□□□□ 0.2
NUP188-205ENST00000477069 ABCC1P33527 1531 aa16.28■□□□□ 0.2
NUP188-205ENST00000477069 ARAP3Q8WWN8 1544 aa16.27■□□□□ 0.19
NUP188-205ENST00000477069 NBPF8Q3BBV2 869 aa16.27■□□□□ 0.19
NUP188-205ENST00000477069 HSPA5P11021 654 aaKnown RBP16.26■□□□□ 0.19
NUP188-205ENST00000477069 FAM135AQ9P2D6 1515 aa16.26■□□□□ 0.19
NUP188-205ENST00000477069 NUP155O75694 1391 aa16.26■□□□□ 0.19
NUP188-205ENST00000477069 PKD2Q13563 968 aa16.26■□□□□ 0.19
NUP188-205ENST00000477069 SPATA31E1Q6ZUB1 1445 aa16.25■□□□□ 0.19
NUP188-205ENST00000477069 KCNH8Q96L42 1107 aa16.25■□□□□ 0.19
NUP188-205ENST00000477069 IQGAP3Q86VI3 1631 aa16.24■□□□□ 0.19
NUP188-205ENST00000477069 WASHC2AQ641Q2 1341 aa16.23■□□□□ 0.19
NUP188-205ENST00000477069 MAGI2Q86UL8 1455 aa16.22■□□□□ 0.19
NUP188-205ENST00000477069 EIF4G2P78344 907 aaKnown RBP eCLIP16.22■□□□□ 0.192e-12■■■■■ 51.9
NUP188-205ENST00000477069 DUOX2Q9NRD8 1548 aa16.21■□□□□ 0.19
NUP188-205ENST00000477069 UHRF1BP1Q6BDS2 1440 aa16.21■□□□□ 0.19
NUP188-205ENST00000477069 ABCA9Q8IUA7 1624 aa16.21■□□□□ 0.19
NUP188-205ENST00000477069 CCER2I3L3R5 266 aa16.21■□□□□ 0.18
NUP188-205ENST00000477069 WDR7Q9Y4E6 1490 aa16.19■□□□□ 0.18
NUP188-205ENST00000477069 KDM5CP41229 1560 aa16.19■□□□□ 0.18
NUP188-205ENST00000477069 ERBINQ96RT1 1412 aa16.18■□□□□ 0.18
NUP188-205ENST00000477069 ANP32CO43423 234 aa16.17■□□□□ 0.18
NUP188-205ENST00000477069 RALGAPBQ86X10 1494 aa16.16■□□□□ 0.18
NUP188-205ENST00000477069 CNTLNQ9NXG0 1405 aa16.16■□□□□ 0.18
NUP188-205ENST00000477069 ZFYVE16Q7Z3T8 1539 aa16.16■□□□□ 0.18
NUP188-205ENST00000477069 TRAPPC8Q9Y2L5 1435 aa16.16■□□□□ 0.18
NUP188-205ENST00000477069 CCDC7Q96M83 1385 aa16.16■□□□□ 0.18
NUP188-205ENST00000477069 BCORL1Q5H9F3 1711 aa16.15■□□□□ 0.18
NUP188-205ENST00000477069 C11orf95C9JLR9 678 aaPredicted RBP16.15■□□□□ 0.18
NUP188-205ENST00000477069 EFCAB2Q5VUJ9 269 aa16.15■□□□□ 0.18
NUP188-205ENST00000477069 PELP1Q8IZL8 1130 aaKnown RBP16.15■□□□□ 0.18
NUP188-205ENST00000477069 PLA2R1Q13018 1463 aa16.13■□□□□ 0.17
NUP188-205ENST00000477069 INO80Q9ULG1 1556 aaPredicted RBP16.13■□□□□ 0.17
NUP188-205ENST00000477069 DEPDC5O75140 1603 aa16.13■□□□□ 0.17
NUP188-205ENST00000477069 RTEL1-TNFRSF6BF6WH68 1400 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms