RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 ADCY10Q96PN6 1610 aa29.73■■■□□ 2.35
LIMS2-214ENST00000476932 ITSN2Q9NZM3 1697 aa29.72■■■□□ 2.35
LIMS2-214ENST00000476932 ZNF644Q9H582 1327 aaPredicted RBP29.71■■■□□ 2.35
LIMS2-214ENST00000476932 TROQ12816 1431 aaPredicted RBP29.71■■■□□ 2.35
LIMS2-214ENST00000476932 PLB1Q6P1J6 1458 aa29.69■■■□□ 2.34
LIMS2-214ENST00000476932 PRG4Q92954 1404 aaPredicted RBP29.69■■■□□ 2.34
LIMS2-214ENST00000476932 KIF14Q15058 1648 aa29.68■■■□□ 2.34
LIMS2-214ENST00000476932 ADGBQ8N7X0 1667 aa29.67■■■□□ 2.34
LIMS2-214ENST00000476932 CAMSAP2Q08AD1 1489 aa29.66■■■□□ 2.34
LIMS2-214ENST00000476932 NUP160Q12769 1436 aa29.65■■■□□ 2.34
LIMS2-214ENST00000476932 CROCC2H7BZ55 1655 aa29.65■■■□□ 2.34
LIMS2-214ENST00000476932 ANKRD30BQ9BXX2 1392 aa29.65■■■□□ 2.34
LIMS2-214ENST00000476932 CDK11AQ9UQ88 783 aaPredicted RBP29.65■■■□□ 2.34
LIMS2-214ENST00000476932 RPRD2Q5VT52 1461 aaKnown RBP29.64■■■□□ 2.34
LIMS2-214ENST00000476932 FOXD1Q16676 465 aa29.63■■■□□ 2.33
LIMS2-214ENST00000476932 TEX14Q8IWB6 1497 aa29.63■■■□□ 2.33
LIMS2-214ENST00000476932 HSPA5P11021 654 aaKnown RBP29.62■■■□□ 2.33
LIMS2-214ENST00000476932 GPATCH8Q9UKJ3 1502 aaKnown RBP29.61■■■□□ 2.33
LIMS2-214ENST00000476932 CHMP7Q8WUX9 453 aaPredicted RBP29.6■■■□□ 2.33
LIMS2-214ENST00000476932 L3MBTL2Q969R5 705 aa29.6■■■□□ 2.33
LIMS2-214ENST00000476932 WASHC2AQ641Q2 1341 aa29.6■■■□□ 2.33
LIMS2-214ENST00000476932 PZPP20742 1482 aa29.56■■■□□ 2.32
LIMS2-214ENST00000476932 ADGRL2O95490 1459 aa29.55■■■□□ 2.32
LIMS2-214ENST00000476932 CARMIL2Q6F5E8 1435 aa29.54■■■□□ 2.32
LIMS2-214ENST00000476932 ABCA8O94911 1581 aa29.53■■■□□ 2.32
LIMS2-214ENST00000476932 NCOA1Q15788 1441 aa29.53■■■□□ 2.32
LIMS2-214ENST00000476932 CDC42BPAQ5VT25 1732 aa29.52■■■□□ 2.32
LIMS2-214ENST00000476932 EIF4G2P78344 907 aaKnown RBP eCLIP29.51■■■□□ 2.32
LIMS2-214ENST00000476932 CFDP1Q9UEE9 299 aaPredicted RBP29.5■■■□□ 2.31
LIMS2-214ENST00000476932 POLR1AO95602 1720 aaPredicted RBP29.49■■■□□ 2.31
LIMS2-214ENST00000476932 JPH4Q96JJ6 628 aa29.48■■■□□ 2.31
LIMS2-214ENST00000476932 FBLN2P98095 1184 aa29.46■■■□□ 2.31
LIMS2-214ENST00000476932 NBPF8Q3BBV2 869 aa29.46■■■□□ 2.31
LIMS2-214ENST00000476932 SLC4A1APQ9BWU0 796 aaKnown RBP29.46■■■□□ 2.31
LIMS2-214ENST00000476932 CNTLNQ9NXG0 1405 aa29.46■■■□□ 2.31
LIMS2-214ENST00000476932 ABCC10Q5T3U5 1492 aa29.44■■■□□ 2.3
LIMS2-214ENST00000476932 SPATA31E1Q6ZUB1 1445 aa29.41■■■□□ 2.3
LIMS2-214ENST00000476932 C11orf95C9JLR9 678 aaPredicted RBP29.41■■■□□ 2.3
LIMS2-214ENST00000476932 MBD5Q9P267 1494 aa29.41■■■□□ 2.3
LIMS2-214ENST00000476932 CCDC7Q96M83 1385 aa29.4■■■□□ 2.3
LIMS2-214ENST00000476932 FKBP8Q14318 412 aa29.4■■■□□ 2.3
LIMS2-214ENST00000476932 ATP10BO94823 1461 aa29.39■■■□□ 2.3
LIMS2-214ENST00000476932 KIAA1107Q9UPP5 1409 aa29.36■■■□□ 2.29
LIMS2-214ENST00000476932 SHANK2Q9UPX8 1470 aa29.36■■■□□ 2.29
LIMS2-214ENST00000476932 ZNF777Q9ULD5 760 aaPredicted RBP29.36■■■□□ 2.29
LIMS2-214ENST00000476932 ANKRD30AQ9BXX3 1397 aa29.35■■■□□ 2.29
LIMS2-214ENST00000476932 TSHZ2Q9NRE2 1034 aa29.33■■■□□ 2.29
LIMS2-214ENST00000476932 BCANQ96GW7 911 aa29.33■■■□□ 2.29
LIMS2-214ENST00000476932 ANKRD50Q9ULJ7 1429 aa29.31■■■□□ 2.28
LIMS2-214ENST00000476932 C9orf84Q5VXU9 1444 aa29.28■■■□□ 2.28
LIMS2-214ENST00000476932 PLEKHD1A6NEE1 506 aa29.27■■■□□ 2.28
LIMS2-214ENST00000476932 KDM5DQ9BY66 1539 aa29.26■■■□□ 2.27
LIMS2-214ENST00000476932 KIF7Q2M1P5 1343 aa29.25■■■□□ 2.27
LIMS2-214ENST00000476932 ARHGEF5Q12774 1597 aa29.24■■■□□ 2.27
LIMS2-214ENST00000476932 NEFLP07196 543 aa29.23■■■□□ 2.27
LIMS2-214ENST00000476932 HNRNPUQ00839 825 aaKnown RBP eCLIP29.23■■■□□ 2.27
LIMS2-214ENST00000476932 PKD2Q13563 968 aa29.22■■■□□ 2.27
LIMS2-214ENST00000476932 CCDC184Q52MB2 194 aa29.22■■■□□ 2.27
LIMS2-214ENST00000476932 BCORL1Q5H9F3 1711 aa29.22■■■□□ 2.27
LIMS2-214ENST00000476932 PRKRIP1Q9H875 184 aaPredicted RBP29.22■■■□□ 2.27
LIMS2-214ENST00000476932 CDC42BPBQ9Y5S2 1711 aa29.21■■■□□ 2.27
LIMS2-214ENST00000476932 KDM5CP41229 1560 aa29.19■■■□□ 2.26
LIMS2-214ENST00000476932 PREX2Q70Z35 1606 aa29.19■■■□□ 2.26
LIMS2-214ENST00000476932 CHD1O14646 1710 aa29.19■■■□□ 2.26
LIMS2-214ENST00000476932 SAMD9LQ8IVG5 1584 aa29.18■■■□□ 2.26
LIMS2-214ENST00000476932 PTPRGP23470 1445 aa29.14■■■□□ 2.26
LIMS2-214ENST00000476932 UHRF1BP1Q6BDS2 1440 aa29.14■■■□□ 2.26
LIMS2-214ENST00000476932 NUP155O75694 1391 aa29.13■■■□□ 2.25
LIMS2-214ENST00000476932 ARHGEF12Q9NZN5 1544 aa29.13■■■□□ 2.25
LIMS2-214ENST00000476932 USP47Q96K76 1375 aa29.12■■■□□ 2.25
LIMS2-214ENST00000476932 SHROOM2Q13796 1616 aa29.11■■■□□ 2.25
LIMS2-214ENST00000476932 KIF15Q9NS87 1388 aa29.11■■■□□ 2.25
LIMS2-214ENST00000476932 RALGAPBQ86X10 1494 aa29.11■■■□□ 2.25
LIMS2-214ENST00000476932 CCDC141Q6ZP82 1450 aa29.08■■■□□ 2.25
LIMS2-214ENST00000476932 DHX29Q7Z478 1369 aaKnown RBP29.07■■■□□ 2.24
LIMS2-214ENST00000476932 HNRNPMP52272 730 aaKnown RBP eCLIP29.06■■■□□ 2.24
LIMS2-214ENST00000476932 TSPY4P0CV99 314 aa29.05■■■□□ 2.24
LIMS2-214ENST00000476932 TSPY10P0CW01 314 aa29.05■■■□□ 2.24
LIMS2-214ENST00000476932 TTC37Q6PGP7 1564 aa29.05■■■□□ 2.24
LIMS2-214ENST00000476932 MRS2Q9HD23 443 aa29.03■■■□□ 2.24
LIMS2-214ENST00000476932 ZNF326Q5BKZ1 582 aaKnown RBP29.02■■■□□ 2.24
LIMS2-214ENST00000476932 MAST1Q9Y2H9 1570 aa29■■■□□ 2.23
LIMS2-214ENST00000476932 FAM135AQ9P2D6 1515 aa29■■■□□ 2.23
LIMS2-214ENST00000476932 SYCP2Q9BX26 1530 aa28.99■■■□□ 2.23
LIMS2-214ENST00000476932 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.98■■■□□ 2.23
LIMS2-214ENST00000476932 MYT1Q01538 1121 aa28.97■■■□□ 2.23
LIMS2-214ENST00000476932 FAM9BQ8IZU0 186 aa28.97■■■□□ 2.23
LIMS2-214ENST00000476932 UNC13BO14795 1591 aa28.97■■■□□ 2.23
LIMS2-214ENST00000476932 ARID4BQ4LE39 1312 aaPredicted RBP28.95■■■□□ 2.23
LIMS2-214ENST00000476932 ERCC6L2Q5T890 1561 aa28.95■■■□□ 2.23
LIMS2-214ENST00000476932 ZBED9Q6R2W3 1325 aa28.95■■■□□ 2.22
LIMS2-214ENST00000476932 MYO5CQ9NQX4 1742 aa28.94■■■□□ 2.22
LIMS2-214ENST00000476932 ARHGAP5Q13017 1502 aa28.92■■■□□ 2.22
LIMS2-214ENST00000476932 ABCC2Q92887 1545 aa28.92■■■□□ 2.22
LIMS2-214ENST00000476932 PLXNC1O60486 1568 aa28.9■■■□□ 2.22
LIMS2-214ENST00000476932 RSPH4AQ5TD94 716 aa28.89■■■□□ 2.22
LIMS2-214ENST00000476932 E9PCH4 1651 aa28.89■■■□□ 2.22
LIMS2-214ENST00000476932 TRPM1Q7Z4N2 1603 aa28.88■■■□□ 2.21
LIMS2-214ENST00000476932 IRX6P78412 446 aaPredicted RBP28.87■■■□□ 2.21
LIMS2-214ENST00000476932 CARD11Q9BXL7 1154 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms