RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 VPS8Q8N3P4 1428 aa12.15□□□□□ -0.46
RBM39-230ENST00000476806 LCE2DQ5TA82 110 aaPredicted RBP12.15□□□□□ -0.46
RBM39-230ENST00000476806 ADAMTS12P58397 1594 aa12.13□□□□□ -0.47
RBM39-230ENST00000476806 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
RBM39-230ENST00000476806 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
RBM39-230ENST00000476806 TDRD9Q8NDG6 1382 aaKnown RBP12.12□□□□□ -0.47
RBM39-230ENST00000476806 EIF4G3O43432 1585 aaKnown RBP12.12□□□□□ -0.47
RBM39-230ENST00000476806 TRIM26Q12899 539 aaPredicted RBP12.08□□□□□ -0.48
RBM39-230ENST00000476806 SYNJ2O15056 1496 aa12.07□□□□□ -0.48
RBM39-230ENST00000476806 FMN1Q68DA7 1419 aa12.06□□□□□ -0.48
RBM39-230ENST00000476806 ILDR1Q86SU0 546 aaPredicted RBP12.05□□□□□ -0.48
RBM39-230ENST00000476806 FAM163AQ96GL9 167 aaPredicted RBP12.05□□□□□ -0.48
RBM39-230ENST00000476806 MAP3K1Q13233 1512 aa12.05□□□□□ -0.48
RBM39-230ENST00000476806 AQRO60306 1485 aaKnown RBP eCLIP12.04□□□□□ -0.482e-12■■■■□ 25.2
RBM39-230ENST00000476806 IQGAP2Q13576 1575 aa12.04□□□□□ -0.48
RBM39-230ENST00000476806 SNAPC4Q5SXM2 1469 aa12.03□□□□□ -0.48
RBM39-230ENST00000476806 SCUBE2Q9NQ36 999 aa12.03□□□□□ -0.48
RBM39-230ENST00000476806 GRIN2AQ12879 1464 aa12.02□□□□□ -0.48
RBM39-230ENST00000476806 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.48
RBM39-230ENST00000476806 ATN1P54259 1190 aaPredicted RBP12.02□□□□□ -0.49
RBM39-230ENST00000476806 KIAA0586Q9BVV6 1533 aa12.01□□□□□ -0.49
RBM39-230ENST00000476806 FYCO1Q9BQS8 1478 aa12□□□□□ -0.49
RBM39-230ENST00000476806 SAMD9Q5K651 1589 aa12□□□□□ -0.49
RBM39-230ENST00000476806 UGGT2Q9NYU1 1516 aa11.98□□□□□ -0.49
RBM39-230ENST00000476806 POTEFA5A3E0 1075 aa11.98□□□□□ -0.49
RBM39-230ENST00000476806 CHMP7Q8WUX9 453 aaPredicted RBP11.97□□□□□ -0.49
RBM39-230ENST00000476806 CCDC61Q9Y6R9 512 aa11.97□□□□□ -0.49
RBM39-230ENST00000476806 TSPYL2Q9H2G4 693 aaPredicted RBP11.96□□□□□ -0.49
RBM39-230ENST00000476806 CHD1O14646 1710 aa11.96□□□□□ -0.49
RBM39-230ENST00000476806 CARMIL2Q6F5E8 1435 aa11.95□□□□□ -0.5
RBM39-230ENST00000476806 NUP160Q12769 1436 aa11.94□□□□□ -0.5
RBM39-230ENST00000476806 CCDC18Q5T9S5 1454 aa11.94□□□□□ -0.5
RBM39-230ENST00000476806 CASKIN1Q8WXD9 1431 aa11.94□□□□□ -0.5
RBM39-230ENST00000476806 KIF12Q96FN5 646 aa11.93□□□□□ -0.5
RBM39-230ENST00000476806 BMP2KQ9NSY1 1161 aaPredicted RBP11.92□□□□□ -0.5
RBM39-230ENST00000476806 HECW1Q76N89 1606 aa11.91□□□□□ -0.5
RBM39-230ENST00000476806 CFAP43Q8NDM7 1665 aa11.91□□□□□ -0.5
RBM39-230ENST00000476806 TRPC6Q9Y210 931 aa11.9□□□□□ -0.5
RBM39-230ENST00000476806 TIAM1Q13009 1591 aa11.89□□□□□ -0.51
RBM39-230ENST00000476806 PCGF6Q9BYE7 350 aa11.89□□□□□ -0.51
RBM39-230ENST00000476806 CLASP1Q7Z460 1538 aa11.88□□□□□ -0.51
RBM39-230ENST00000476806 KIAA0556O60303 1618 aa11.88□□□□□ -0.51
RBM39-230ENST00000476806 PCF11O94913 1555 aaKnown RBP11.88□□□□□ -0.51
RBM39-230ENST00000476806 RANGAP1P46060 587 aaPredicted RBP11.87□□□□□ -0.51
RBM39-230ENST00000476806 FHOD3Q2V2M9 1422 aa11.86□□□□□ -0.51
RBM39-230ENST00000476806 CEP170Q5SW79 1584 aa11.86□□□□□ -0.51
RBM39-230ENST00000476806 KDM4FA0A1W2PPD8 638 aa11.84□□□□□ -0.51
RBM39-230ENST00000476806 TIE1P35590 1138 aa11.84□□□□□ -0.51
RBM39-230ENST00000476806 CDAN1Q8IWY9 1227 aa11.84□□□□□ -0.51
RBM39-230ENST00000476806 EHBP1L1Q8N3D4 1523 aa11.83□□□□□ -0.52
RBM39-230ENST00000476806 COLQQ9Y215 455 aaPredicted RBP11.83□□□□□ -0.52
RBM39-230ENST00000476806 LRRC9Q6ZRR7 1453 aa11.83□□□□□ -0.52
RBM39-230ENST00000476806 CDK11AQ9UQ88 783 aaPredicted RBP11.82□□□□□ -0.52
RBM39-230ENST00000476806 MAP3K13O43283 966 aa11.81□□□□□ -0.52
RBM39-230ENST00000476806 ZEB1P37275 1124 aaPredicted RBP11.81□□□□□ -0.52
RBM39-230ENST00000476806 DISP1Q96F81 1524 aa11.8□□□□□ -0.52
RBM39-230ENST00000476806 MTUS2Q5JR59 1369 aa11.79□□□□□ -0.52
RBM39-230ENST00000476806 PROM2Q8N271 834 aa11.79□□□□□ -0.52
RBM39-230ENST00000476806 JPH4Q96JJ6 628 aa11.79□□□□□ -0.52
RBM39-230ENST00000476806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.79□□□□□ -0.52
RBM39-230ENST00000476806 RRBP1Q9P2E9 1410 aaKnown RBP11.78□□□□□ -0.52
RBM39-230ENST00000476806 TTLL13PA6NNM8 815 aa11.78□□□□□ -0.52
RBM39-230ENST00000476806 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
RBM39-230ENST00000476806 RAPGEF6Q8TEU7 1601 aa11.78□□□□□ -0.52
RBM39-230ENST00000476806 SUPT6HQ7KZ85 1726 aaKnown RBP11.77□□□□□ -0.52
RBM39-230ENST00000476806 SEC24BO95487 1268 aa11.76□□□□□ -0.53
RBM39-230ENST00000476806 ACIN1Q9UKV3 1341 aaKnown RBP11.76□□□□□ -0.53
RBM39-230ENST00000476806 EPRSP07814 1512 aaKnown RBP11.75□□□□□ -0.53
RBM39-230ENST00000476806 P3H3Q8IVL6 736 aa11.74□□□□□ -0.53
RBM39-230ENST00000476806 ERCC6L2Q5T890 1561 aa11.74□□□□□ -0.53
RBM39-230ENST00000476806 RASEFQ8IZ41 740 aa11.73□□□□□ -0.53
RBM39-230ENST00000476806 CCNB3Q8WWL7 1395 aa11.73□□□□□ -0.53
RBM39-230ENST00000476806 ATP1B4Q9UN42 357 aaPredicted RBP11.73□□□□□ -0.53
RBM39-230ENST00000476806 PRG4Q92954 1404 aaPredicted RBP11.71□□□□□ -0.53
RBM39-230ENST00000476806 IER5LQ5T953 404 aa11.71□□□□□ -0.53
RBM39-230ENST00000476806 ST18O60284 1047 aa11.7□□□□□ -0.54
RBM39-230ENST00000476806 TRIM35Q9UPQ4 493 aa11.7□□□□□ -0.54
RBM39-230ENST00000476806 PTPRGP23470 1445 aa11.69□□□□□ -0.54
RBM39-230ENST00000476806 MIA2Q96PC5 1412 aa11.69□□□□□ -0.54
RBM39-230ENST00000476806 ABCA8O94911 1581 aa11.69□□□□□ -0.54
RBM39-230ENST00000476806 NUP153P49790 1475 aaKnown RBP11.67□□□□□ -0.54
RBM39-230ENST00000476806 ITSN2Q9NZM3 1697 aa11.67□□□□□ -0.54
RBM39-230ENST00000476806 MYOM3Q5VTT5 1437 aa11.67□□□□□ -0.54
RBM39-230ENST00000476806 KANK4Q5T7N3 995 aaPredicted RBP11.66□□□□□ -0.54
RBM39-230ENST00000476806 SLAIN1Q8ND83 568 aa11.66□□□□□ -0.54
RBM39-230ENST00000476806 ADCY10Q96PN6 1610 aa11.66□□□□□ -0.54
RBM39-230ENST00000476806 TROQ12816 1431 aaPredicted RBP11.66□□□□□ -0.54
RBM39-230ENST00000476806 NCOA2Q15596 1464 aa11.65□□□□□ -0.54
RBM39-230ENST00000476806 HRCP23327 699 aa11.65□□□□□ -0.54
RBM39-230ENST00000476806 PPARGC1BQ86YN6 1023 aaKnown RBP11.65□□□□□ -0.54
RBM39-230ENST00000476806 UACAQ9BZF9 1416 aa11.65□□□□□ -0.54
RBM39-230ENST00000476806 KIF14Q15058 1648 aa11.64□□□□□ -0.55
RBM39-230ENST00000476806 UHRF1BP1LA0JNW5 1464 aa11.64□□□□□ -0.55
RBM39-230ENST00000476806 CLSPNQ9HAW4 1339 aa11.64□□□□□ -0.55
RBM39-230ENST00000476806 FGD6Q6ZV73 1430 aa11.64□□□□□ -0.55
RBM39-230ENST00000476806 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
RBM39-230ENST00000476806 KIF13AQ9H1H9 1805 aa11.64□□□□□ -0.55
RBM39-230ENST00000476806 ABCC2Q92887 1545 aa11.64□□□□□ -0.55
RBM39-230ENST00000476806 FAM69CQ0P6D2 419 aa11.63□□□□□ -0.55
RBM39-230ENST00000476806 LRRIQ1Q96JM4 1722 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms