RNA–Protein interactions for RNA: ENST00000474955.5

ATP13A1-208, Transcript of ATPase 13A1, humanhuman

TSL 5

Gene ATP13A1, Length 927 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-208ENST00000474955 VPS8Q8N3P4 1428 aa22.23■■□□□ 1.15
ATP13A1-208ENST00000474955 MTUS2Q5JR59 1369 aa22.23■■□□□ 1.15
ATP13A1-208ENST00000474955 CDC42BPBQ9Y5S2 1711 aa22.21■■□□□ 1.15
ATP13A1-208ENST00000474955 POGZQ7Z3K3 1410 aa22.21■■□□□ 1.15
ATP13A1-208ENST00000474955 PREX2Q70Z35 1606 aa22.2■■□□□ 1.15
ATP13A1-208ENST00000474955 ZMYM4Q5VZL5 1548 aa22.2■■□□□ 1.14
ATP13A1-208ENST00000474955 GPATCH8Q9UKJ3 1502 aaKnown RBP22.18■■□□□ 1.14
ATP13A1-208ENST00000474955 CDC42BPAQ5VT25 1732 aa22.17■■□□□ 1.14
ATP13A1-208ENST00000474955 EHBP1L1Q8N3D4 1523 aa22.16■■□□□ 1.14
ATP13A1-208ENST00000474955 MAGI2Q86UL8 1455 aa22.16■■□□□ 1.14
ATP13A1-208ENST00000474955 ARHGEF40Q8TER5 1519 aa22.15■■□□□ 1.14
ATP13A1-208ENST00000474955 YEATS2Q9ULM3 1422 aa22.14■■□□□ 1.14
ATP13A1-208ENST00000474955 AFAP1Q8N556 730 aa22.14■■□□□ 1.13
ATP13A1-208ENST00000474955 CCNB3Q8WWL7 1395 aa22.13■■□□□ 1.13
ATP13A1-208ENST00000474955 ZNF518AQ6AHZ1 1483 aa22.13■■□□□ 1.13
ATP13A1-208ENST00000474955 TIAM1Q13009 1591 aa22.12■■□□□ 1.13
ATP13A1-208ENST00000474955 ZFYVE16Q7Z3T8 1539 aa22.12■■□□□ 1.13
ATP13A1-208ENST00000474955 ABCC1P33527 1531 aa22.11■■□□□ 1.13
ATP13A1-208ENST00000474955 ARHGEF12Q9NZN5 1544 aa22.11■■□□□ 1.13
ATP13A1-208ENST00000474955 CFDP1Q9UEE9 299 aaPredicted RBP22.11■■□□□ 1.13
ATP13A1-208ENST00000474955 ZNF777Q9ULD5 760 aaPredicted RBP22.1■■□□□ 1.13
ATP13A1-208ENST00000474955 KDM5CP41229 1560 aa22.09■■□□□ 1.13
ATP13A1-208ENST00000474955 TRAPPC8Q9Y2L5 1435 aa22.09■■□□□ 1.13
ATP13A1-208ENST00000474955 ARID4BQ4LE39 1312 aaPredicted RBP22.07■■□□□ 1.12
ATP13A1-208ENST00000474955 MAP3K1Q13233 1512 aa22.07■■□□□ 1.12
ATP13A1-208ENST00000474955 SAMD9LQ8IVG5 1584 aa22.07■■□□□ 1.12
ATP13A1-208ENST00000474955 LRRC9Q6ZRR7 1453 aa22.06■■□□□ 1.12
ATP13A1-208ENST00000474955 ITSN2Q9NZM3 1697 aa22.05■■□□□ 1.12
ATP13A1-208ENST00000474955 ATP10AO60312 1499 aa22.05■■□□□ 1.12
ATP13A1-208ENST00000474955 NCOA2Q15596 1464 aa22.05■■□□□ 1.12
ATP13A1-208ENST00000474955 MLH3Q9UHC1 1453 aa22.04■■□□□ 1.12
ATP13A1-208ENST00000474955 KIAA1107Q9UPP5 1409 aa22.04■■□□□ 1.12
ATP13A1-208ENST00000474955 HNRNPMP52272 730 aaKnown RBP eCLIP22.03■■□□□ 1.12
ATP13A1-208ENST00000474955 SUPT6HQ7KZ85 1726 aaKnown RBP22.03■■□□□ 1.12
ATP13A1-208ENST00000474955 PLEKHH2Q8IVE3 1493 aa22.03■■□□□ 1.12
ATP13A1-208ENST00000474955 ADAMTSL3P82987 1691 aa22.02■■□□□ 1.12
ATP13A1-208ENST00000474955 KANK4Q5T7N3 995 aaPredicted RBP22.02■■□□□ 1.12
ATP13A1-208ENST00000474955 HECW2Q9P2P5 1572 aa22.02■■□□□ 1.12
ATP13A1-208ENST00000474955 BCORL1Q5H9F3 1711 aa22.02■■□□□ 1.12
ATP13A1-208ENST00000474955 SYCP2Q9BX26 1530 aa22.01■■□□□ 1.11
ATP13A1-208ENST00000474955 C9orf84Q5VXU9 1444 aa22■■□□□ 1.11
ATP13A1-208ENST00000474955 MYT1LQ9UL68 1186 aa22■■□□□ 1.11
ATP13A1-208ENST00000474955 ZNF644Q9H582 1327 aaPredicted RBP22■■□□□ 1.11
ATP13A1-208ENST00000474955 SIGLEC1Q9BZZ2 1709 aa22■■□□□ 1.11
ATP13A1-208ENST00000474955 DIP2CQ9Y2E4 1556 aa21.96■■□□□ 1.11
ATP13A1-208ENST00000474955 APLP2Q06481 763 aa21.95■■□□□ 1.1
ATP13A1-208ENST00000474955 SPAG9O60271 1321 aaKnown RBP21.94■■□□□ 1.1
ATP13A1-208ENST00000474955 MBD5Q9P267 1494 aa21.94■■□□□ 1.1
ATP13A1-208ENST00000474955 ABCA6Q8N139 1617 aa21.94■■□□□ 1.1
ATP13A1-208ENST00000474955 KIDINS220Q9ULH0 1771 aa21.94■■□□□ 1.1
ATP13A1-208ENST00000474955 PTPRMP28827 1452 aa21.93■■□□□ 1.1
ATP13A1-208ENST00000474955 MADDQ8WXG6 1647 aa21.93■■□□□ 1.1
ATP13A1-208ENST00000474955 REREQ9P2R6 1566 aa21.93■■□□□ 1.1
ATP13A1-208ENST00000474955 MLECQ14165 292 aa21.92■■□□□ 1.1
ATP13A1-208ENST00000474955 CAMSAP2Q08AD1 1489 aa21.89■■□□□ 1.09
ATP13A1-208ENST00000474955 AGLP35573 1532 aa21.87■■□□□ 1.09
ATP13A1-208ENST00000474955 ATP7AQ04656 1500 aa21.87■■□□□ 1.09
ATP13A1-208ENST00000474955 INO80Q9ULG1 1556 aaPredicted RBP21.87■■□□□ 1.09
ATP13A1-208ENST00000474955 RSPH4AQ5TD94 716 aa21.86■■□□□ 1.09
ATP13A1-208ENST00000474955 MYOM3Q5VTT5 1437 aa21.86■■□□□ 1.09
ATP13A1-208ENST00000474955 RIMS1Q86UR5 1692 aaKnown RBP21.85■■□□□ 1.09
ATP13A1-208ENST00000474955 MIA2Q96PC5 1412 aa21.84■■□□□ 1.09
ATP13A1-208ENST00000474955 RTEL1-TNFRSF6BF6WH68 1400 aa21.83■■□□□ 1.09
ATP13A1-208ENST00000474955 CCDC141Q6ZP82 1450 aa21.83■■□□□ 1.08
ATP13A1-208ENST00000474955 FER1L4A9Z1Z3 1794 aa21.8■■□□□ 1.08
ATP13A1-208ENST00000474955 ARHGEF5Q12774 1597 aa21.8■■□□□ 1.08
ATP13A1-208ENST00000474955 A2MP01023 1474 aa21.79■■□□□ 1.08
ATP13A1-208ENST00000474955 PLXNC1O60486 1568 aa21.78■■□□□ 1.08
ATP13A1-208ENST00000474955 TSPY4P0CV99 314 aa21.75■■□□□ 1.07
ATP13A1-208ENST00000474955 TSPY10P0CW01 314 aa21.75■■□□□ 1.07
ATP13A1-208ENST00000474955 PLPPR3Q6T4P5 718 aa21.74■■□□□ 1.07
ATP13A1-208ENST00000474955 ADGBQ8N7X0 1667 aa21.74■■□□□ 1.07
ATP13A1-208ENST00000474955 DHX29Q7Z478 1369 aaKnown RBP21.73■■□□□ 1.07
ATP13A1-208ENST00000474955 FGD6Q6ZV73 1430 aa21.72■■□□□ 1.07
ATP13A1-208ENST00000474955 CEBPAP49715 358 aaPredicted RBP21.71■■□□□ 1.07
ATP13A1-208ENST00000474955 ESF1Q9H501 851 aaKnown RBP21.7■■□□□ 1.06
ATP13A1-208ENST00000474955 PTPN23Q9H3S7 1636 aa21.69■■□□□ 1.06
ATP13A1-208ENST00000474955 CNTLNQ9NXG0 1405 aa21.69■■□□□ 1.06
ATP13A1-208ENST00000474955 MAST1Q9Y2H9 1570 aa21.69■■□□□ 1.06
ATP13A1-208ENST00000474955 TCOF1Q13428 1488 aaKnown RBP21.68■■□□□ 1.06
ATP13A1-208ENST00000474955 GGT6Q6P531 493 aa21.67■■□□□ 1.06
ATP13A1-208ENST00000474955 LMTK3Q96Q04 1460 aa21.66■■□□□ 1.06
ATP13A1-208ENST00000474955 PPP6R1Q9UPN7 881 aa21.66■■□□□ 1.06
ATP13A1-208ENST00000474955 ABCC5O15440 1437 aa21.65■■□□□ 1.06
ATP13A1-208ENST00000474955 KIF3BO15066 747 aa21.63■■□□□ 1.05
ATP13A1-208ENST00000474955 C3P01024 1663 aa21.62■■□□□ 1.05
ATP13A1-208ENST00000474955 ZMYM3Q14202 1370 aa21.61■■□□□ 1.05
ATP13A1-208ENST00000474955 DAPK1P53355 1430 aa21.61■■□□□ 1.05
ATP13A1-208ENST00000474955 SHANK2Q9UPX8 1470 aa21.6■■□□□ 1.05
ATP13A1-208ENST00000474955 MROH2AA6NES4 1674 aa21.6■■□□□ 1.05
ATP13A1-208ENST00000474955 DNMT1P26358 1616 aaKnown RBP21.59■■□□□ 1.05
ATP13A1-208ENST00000474955 CROCC2H7BZ55 1655 aa21.56■■□□□ 1.04
ATP13A1-208ENST00000474955 CLTCQ00610 1675 aaKnown RBP21.56■■□□□ 1.04
ATP13A1-208ENST00000474955 HSPA2P54652 639 aa21.56■■□□□ 1.04
ATP13A1-208ENST00000474955 SETD1BQ9UPS6 1966 aaKnown RBP21.56■■□□□ 1.04
ATP13A1-208ENST00000474955 FAM50AQ14320 339 aaKnown RBP21.55■■□□□ 1.04
ATP13A1-208ENST00000474955 PPARGC1BQ86YN6 1023 aaKnown RBP21.55■■□□□ 1.04
ATP13A1-208ENST00000474955 PREX1Q8TCU6 1659 aa21.55■■□□□ 1.04
ATP13A1-208ENST00000474955 DUOX2Q9NRD8 1548 aa21.55■■□□□ 1.04
ATP13A1-208ENST00000474955 NPATQ14207 1427 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms