RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 ADGRL1O94910 1474 aa10.01□□□□□ -0.81
CPSF7-210ENST00000474684 TTC37Q6PGP7 1564 aa10.01□□□□□ -0.81
CPSF7-210ENST00000474684 CD109Q6YHK3 1445 aa9.99□□□□□ -0.81
CPSF7-210ENST00000474684 CDK13Q14004 1512 aaKnown RBP9.98□□□□□ -0.81
CPSF7-210ENST00000474684 KDM4FA0A1W2PPD8 638 aa9.98□□□□□ -0.81
CPSF7-210ENST00000474684 MYCNP04198 464 aaPredicted RBP9.98□□□□□ -0.81
CPSF7-210ENST00000474684 RICTORQ6R327 1708 aa9.98□□□□□ -0.81
CPSF7-210ENST00000474684 RANGAP1P46060 587 aaPredicted RBP9.97□□□□□ -0.81
CPSF7-210ENST00000474684 HECW1Q76N89 1606 aa9.96□□□□□ -0.81
CPSF7-210ENST00000474684 ZBTB12Q9Y330 459 aaPredicted RBP9.96□□□□□ -0.82
CPSF7-210ENST00000474684 ARHGAP35Q9NRY4 1499 aa9.96□□□□□ -0.82
CPSF7-210ENST00000474684 SIGLEC1Q9BZZ2 1709 aa9.96□□□□□ -0.82
CPSF7-210ENST00000474684 KCNH8Q96L42 1107 aa9.95□□□□□ -0.82
CPSF7-210ENST00000474684 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.95□□□□□ -0.82
CPSF7-210ENST00000474684 MYO5CQ9NQX4 1742 aa9.94□□□□□ -0.82
CPSF7-210ENST00000474684 KIF14Q15058 1648 aa9.94□□□□□ -0.82
CPSF7-210ENST00000474684 PCF11O94913 1555 aaKnown RBP9.94□□□□□ -0.82
CPSF7-210ENST00000474684 ARAP3Q8WWN8 1544 aa9.94□□□□□ -0.82
CPSF7-210ENST00000474684 EHMT2Q96KQ7 1210 aa9.94□□□□□ -0.82
CPSF7-210ENST00000474684 CFAP74Q9C0B2 1584 aa9.92□□□□□ -0.82
CPSF7-210ENST00000474684 ARHGEF40Q8TER5 1519 aa9.92□□□□□ -0.82
CPSF7-210ENST00000474684 ADAMTSL3P82987 1691 aa9.91□□□□□ -0.82
CPSF7-210ENST00000474684 NEO1Q92859 1461 aa9.91□□□□□ -0.82
CPSF7-210ENST00000474684 BCORL1Q5H9F3 1711 aa9.9□□□□□ -0.82
CPSF7-210ENST00000474684 HECW2Q9P2P5 1572 aa9.9□□□□□ -0.82
CPSF7-210ENST00000474684 MADDQ8WXG6 1647 aa9.89□□□□□ -0.83
CPSF7-210ENST00000474684 PIP4P2Q8N4L2 257 aa9.89□□□□□ -0.83
CPSF7-210ENST00000474684 CDC42BPBQ9Y5S2 1711 aa9.89□□□□□ -0.83
CPSF7-210ENST00000474684 ZMYM4Q5VZL5 1548 aa9.87□□□□□ -0.83
CPSF7-210ENST00000474684 RIMS1Q86UR5 1692 aaKnown RBP9.87□□□□□ -0.83
CPSF7-210ENST00000474684 HAX1O00165 279 aa9.87□□□□□ -0.83
CPSF7-210ENST00000474684 REM2Q8IYK8 340 aaPredicted RBP9.87□□□□□ -0.83
CPSF7-210ENST00000474684 CDC42BPAQ5VT25 1732 aa9.87□□□□□ -0.83
CPSF7-210ENST00000474684 FANCAO15360 1455 aa9.86□□□□□ -0.83
CPSF7-210ENST00000474684 PREX2Q70Z35 1606 aa9.86□□□□□ -0.83
CPSF7-210ENST00000474684 FMN1Q68DA7 1419 aa9.85□□□□□ -0.83
CPSF7-210ENST00000474684 FER1L4A9Z1Z3 1794 aa9.85□□□□□ -0.83
CPSF7-210ENST00000474684 UBTFP17480 764 aaKnown RBP9.84□□□□□ -0.83
CPSF7-210ENST00000474684 ITSN2Q9NZM3 1697 aa9.83□□□□□ -0.84
CPSF7-210ENST00000474684 ZFYVE16Q7Z3T8 1539 aa9.83□□□□□ -0.84
CPSF7-210ENST00000474684 RAPGEF3O95398 923 aa9.83□□□□□ -0.84
CPSF7-210ENST00000474684 DENND4BO75064 1496 aaPredicted RBP9.83□□□□□ -0.84
CPSF7-210ENST00000474684 AKNAQ7Z591 1439 aa9.82□□□□□ -0.84
CPSF7-210ENST00000474684 YEATS2Q9ULM3 1422 aa9.82□□□□□ -0.84
CPSF7-210ENST00000474684 PHLDB1Q86UU1 1377 aa9.81□□□□□ -0.84
CPSF7-210ENST00000474684 ABCA6Q8N139 1617 aa9.81□□□□□ -0.84
CPSF7-210ENST00000474684 TROQ12816 1431 aaPredicted RBP9.81□□□□□ -0.84
CPSF7-210ENST00000474684 POGZQ7Z3K3 1410 aa9.81□□□□□ -0.84
CPSF7-210ENST00000474684 KDM5CP41229 1560 aa9.8□□□□□ -0.84
CPSF7-210ENST00000474684 FXR2P51116 673 aaKnown RBP eCLIP9.8□□□□□ -0.84
CPSF7-210ENST00000474684 PTPRMP28827 1452 aa9.79□□□□□ -0.84
CPSF7-210ENST00000474684 FYCO1Q9BQS8 1478 aa9.79□□□□□ -0.84
CPSF7-210ENST00000474684 ABCC1P33527 1531 aa9.79□□□□□ -0.84
CPSF7-210ENST00000474684 ARHGAP5Q13017 1502 aa9.79□□□□□ -0.84
CPSF7-210ENST00000474684 PLEKHD1A6NEE1 506 aa9.79□□□□□ -0.84
CPSF7-210ENST00000474684 PLCH2O75038 1416 aa9.79□□□□□ -0.84
CPSF7-210ENST00000474684 CASKIN1Q8WXD9 1431 aa9.79□□□□□ -0.84
CPSF7-210ENST00000474684 DIP2CQ9Y2E4 1556 aa9.79□□□□□ -0.84
CPSF7-210ENST00000474684 CCDC18Q5T9S5 1454 aa9.79□□□□□ -0.84
CPSF7-210ENST00000474684 CLIP1P30622 1438 aa9.77□□□□□ -0.85
CPSF7-210ENST00000474684 SAMD9LQ8IVG5 1584 aa9.76□□□□□ -0.85
CPSF7-210ENST00000474684 KIDINS220Q9ULH0 1771 aa9.76□□□□□ -0.85
CPSF7-210ENST00000474684 SCAPERQ9BY12 1400 aa9.76□□□□□ -0.85
CPSF7-210ENST00000474684 ATP1B4Q9UN42 357 aaPredicted RBP9.76□□□□□ -0.85
CPSF7-210ENST00000474684 PITPNM1O00562 1244 aa9.75□□□□□ -0.85
CPSF7-210ENST00000474684 ARHGEF12Q9NZN5 1544 aa9.75□□□□□ -0.85
CPSF7-210ENST00000474684 MAGI2Q86UL8 1455 aa9.73□□□□□ -0.85
CPSF7-210ENST00000474684 SYCP2Q9BX26 1530 aa9.73□□□□□ -0.85
CPSF7-210ENST00000474684 ZNF518AQ6AHZ1 1483 aa9.72□□□□□ -0.85
CPSF7-210ENST00000474684 LMTK3Q96Q04 1460 aa9.72□□□□□ -0.85
CPSF7-210ENST00000474684 TIAM1Q13009 1591 aa9.72□□□□□ -0.85
CPSF7-210ENST00000474684 REREQ9P2R6 1566 aa9.72□□□□□ -0.85
CPSF7-210ENST00000474684 C9orf84Q5VXU9 1444 aa9.72□□□□□ -0.85
CPSF7-210ENST00000474684 INO80Q9ULG1 1556 aaPredicted RBP9.71□□□□□ -0.85
CPSF7-210ENST00000474684 C3P01024 1663 aa9.71□□□□□ -0.85
CPSF7-210ENST00000474684 PREX1Q8TCU6 1659 aa9.71□□□□□ -0.85
CPSF7-210ENST00000474684 TRAPPC8Q9Y2L5 1435 aa9.71□□□□□ -0.86
CPSF7-210ENST00000474684 SUPT6HQ7KZ85 1726 aaKnown RBP9.7□□□□□ -0.86
CPSF7-210ENST00000474684 ARID4BQ4LE39 1312 aaPredicted RBP9.7□□□□□ -0.86
CPSF7-210ENST00000474684 EHBP1L1Q8N3D4 1523 aa9.7□□□□□ -0.86
CPSF7-210ENST00000474684 ATP10AO60312 1499 aa9.69□□□□□ -0.86
CPSF7-210ENST00000474684 CEP162Q5TB80 1403 aa9.69□□□□□ -0.86
CPSF7-210ENST00000474684 ADGBQ8N7X0 1667 aa9.69□□□□□ -0.86
CPSF7-210ENST00000474684 GPATCH8Q9UKJ3 1502 aaKnown RBP9.68□□□□□ -0.86
CPSF7-210ENST00000474684 EFCAB2Q5VUJ9 269 aa9.67□□□□□ -0.86
CPSF7-210ENST00000474684 CDK11AQ9UQ88 783 aaPredicted RBP9.67□□□□□ -0.86
CPSF7-210ENST00000474684 PLXNC1O60486 1568 aa9.67□□□□□ -0.86
CPSF7-210ENST00000474684 ATP7AQ04656 1500 aa9.66□□□□□ -0.86
CPSF7-210ENST00000474684 MLH3Q9UHC1 1453 aa9.66□□□□□ -0.86
CPSF7-210ENST00000474684 STRCQ7RTU9 1775 aa9.65□□□□□ -0.86
CPSF7-210ENST00000474684 SETD1BQ9UPS6 1966 aaKnown RBP9.65□□□□□ -0.86
CPSF7-210ENST00000474684 MLECQ14165 292 aa9.65□□□□□ -0.86
CPSF7-210ENST00000474684 AFAP1Q8N556 730 aa9.65□□□□□ -0.86
CPSF7-210ENST00000474684 AGLP35573 1532 aa9.65□□□□□ -0.86
CPSF7-210ENST00000474684 MROH2AA6NES4 1674 aa9.64□□□□□ -0.87
CPSF7-210ENST00000474684 CLTCQ00610 1675 aaKnown RBP9.64□□□□□ -0.87
CPSF7-210ENST00000474684 MTUS2Q5JR59 1369 aa9.62□□□□□ -0.87
CPSF7-210ENST00000474684 ATF5Q9Y2D1 282 aaPredicted RBP9.61□□□□□ -0.87
CPSF7-210ENST00000474684 MYO3AQ8NEV4 1616 aa9.6□□□□□ -0.87
CPSF7-210ENST00000474684 NCOA2Q15596 1464 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms