RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 SLC4A1APQ9BWU0 796 aaKnown RBP14.74□□□□□ -0.05
LSS-208ENST00000474319 PTPRGP23470 1445 aa14.73□□□□□ -0.05
LSS-208ENST00000474319 ADAMTS12P58397 1594 aa14.73□□□□□ -0.05
LSS-208ENST00000474319 KIAA0586Q9BVV6 1533 aa14.73□□□□□ -0.05
LSS-208ENST00000474319 THOC2Q8NI27 1593 aaKnown RBP14.73□□□□□ -0.05
LSS-208ENST00000474319 PBRM1Q86U86 1689 aa14.72□□□□□ -0.05
LSS-208ENST00000474319 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.054e-9■□□□□ 9.5
LSS-208ENST00000474319 NBPF8Q3BBV2 869 aa14.71□□□□□ -0.05
LSS-208ENST00000474319 KDM2AQ9Y2K7 1162 aa14.71□□□□□ -0.05
LSS-208ENST00000474319 NAIPQ13075 1403 aa14.7□□□□□ -0.06
LSS-208ENST00000474319 HNRNPMP52272 730 aaKnown RBP eCLIP14.7□□□□□ -0.06
LSS-208ENST00000474319 NCOA2Q15596 1464 aa14.7□□□□□ -0.06
LSS-208ENST00000474319 UACAQ9BZF9 1416 aa14.69□□□□□ -0.06
LSS-208ENST00000474319 FYCO1Q9BQS8 1478 aa14.68□□□□□ -0.06
LSS-208ENST00000474319 PRKRIP1Q9H875 184 aaPredicted RBP14.68□□□□□ -0.06
LSS-208ENST00000474319 MAGI1Q96QZ7 1491 aaPredicted RBP14.68□□□□□ -0.06
LSS-208ENST00000474319 EFCAB5A4FU69 1503 aa14.67□□□□□ -0.06
LSS-208ENST00000474319 NPM2Q86SE8 214 aaKnown RBP14.66□□□□□ -0.06
LSS-208ENST00000474319 CTTNBP2Q8WZ74 1663 aa14.66□□□□□ -0.06
LSS-208ENST00000474319 CYB5RLQ6IPT4 315 aa14.65□□□□□ -0.06
LSS-208ENST00000474319 HFM1A2PYH4 1435 aa14.65□□□□□ -0.06
LSS-208ENST00000474319 MYOM3Q5VTT5 1437 aa14.65□□□□□ -0.06
LSS-208ENST00000474319 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
LSS-208ENST00000474319 PPP4R2Q9NY27 417 aa14.64□□□□□ -0.07
LSS-208ENST00000474319 EPRSP07814 1512 aaKnown RBP14.64□□□□□ -0.07
LSS-208ENST00000474319 SENP3Q9H4L4 574 aaPredicted RBP14.63□□□□□ -0.07
LSS-208ENST00000474319 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
LSS-208ENST00000474319 TSPY4P0CV99 314 aa14.62□□□□□ -0.07
LSS-208ENST00000474319 TSPY10P0CW01 314 aa14.62□□□□□ -0.07
LSS-208ENST00000474319 CEP170Q5SW79 1584 aa14.62□□□□□ -0.07
LSS-208ENST00000474319 DISP1Q96F81 1524 aa14.62□□□□□ -0.07
LSS-208ENST00000474319 MAP3K1Q13233 1512 aa14.62□□□□□ -0.07
LSS-208ENST00000474319 KIF7Q2M1P5 1343 aa14.61□□□□□ -0.07
LSS-208ENST00000474319 CCDC136Q96JN2 1154 aa14.61□□□□□ -0.07
LSS-208ENST00000474319 PTPN23Q9H3S7 1636 aa14.6□□□□□ -0.07
LSS-208ENST00000474319 AKNAQ7Z591 1439 aa14.58□□□□□ -0.07
LSS-208ENST00000474319 CCDC7Q96M83 1385 aa14.58□□□□□ -0.08
LSS-208ENST00000474319 PAK3O75914 559 aaPredicted RBP14.57□□□□□ -0.08
LSS-208ENST00000474319 TMC1Q8TDI8 760 aa14.57□□□□□ -0.08
LSS-208ENST00000474319 CFAP43Q8NDM7 1665 aa14.57□□□□□ -0.08
LSS-208ENST00000474319 NUP153P49790 1475 aaKnown RBP14.56□□□□□ -0.08
LSS-208ENST00000474319 MAGI3Q5TCQ9 1506 aa14.56□□□□□ -0.08
LSS-208ENST00000474319 RGL3Q3MIN7 710 aa14.55□□□□□ -0.08
LSS-208ENST00000474319 CNTLNQ9NXG0 1405 aa14.55□□□□□ -0.08
LSS-208ENST00000474319 PKD2Q13563 968 aa14.54□□□□□ -0.08
LSS-208ENST00000474319 KDM6BO15054 1643 aa14.54□□□□□ -0.08
LSS-208ENST00000474319 NUP160Q12769 1436 aa14.53□□□□□ -0.08
LSS-208ENST00000474319 KIAA0556O60303 1618 aa14.52□□□□□ -0.08
LSS-208ENST00000474319 SKAP1Q86WV1 359 aa14.52□□□□□ -0.08
LSS-208ENST00000474319 SAMD9Q5K651 1589 aa14.52□□□□□ -0.09
LSS-208ENST00000474319 ERCC6L2Q5T890 1561 aa14.52□□□□□ -0.09
LSS-208ENST00000474319 UGGT2Q9NYU1 1516 aa14.51□□□□□ -0.09
LSS-208ENST00000474319 DEKP35659 375 aaKnown RBP14.51□□□□□ -0.09
LSS-208ENST00000474319 ARHGEF11O15085 1522 aa14.5□□□□□ -0.09
LSS-208ENST00000474319 CARD11Q9BXL7 1154 aa14.5□□□□□ -0.09
LSS-208ENST00000474319 HECW1Q76N89 1606 aa14.5□□□□□ -0.09
LSS-208ENST00000474319 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.49□□□□□ -0.095e-8■□□□□ 8.8
LSS-208ENST00000474319 ZBED9Q6R2W3 1325 aa14.49□□□□□ -0.09
LSS-208ENST00000474319 FANCIQ9NVI1 1328 aa14.49□□□□□ -0.09
LSS-208ENST00000474319 DENND4BO75064 1496 aaPredicted RBP14.48□□□□□ -0.09
LSS-208ENST00000474319 AFAP1Q8N556 730 aa14.48□□□□□ -0.09
LSS-208ENST00000474319 PLPPR3Q6T4P5 718 aa14.48□□□□□ -0.09
LSS-208ENST00000474319 DCAF11Q8TEB1 546 aa14.48□□□□□ -0.09
LSS-208ENST00000474319 ATP10BO94823 1461 aa14.48□□□□□ -0.09
LSS-208ENST00000474319 TROQ12816 1431 aaPredicted RBP14.47□□□□□ -0.09
LSS-208ENST00000474319 NOP58Q9Y2X3 529 aaKnown RBP14.47□□□□□ -0.09
LSS-208ENST00000474319 LAS1LQ9Y4W2 734 aaKnown RBP14.46□□□□□ -0.09
LSS-208ENST00000474319 KDM5BQ9UGL1 1544 aa14.46□□□□□ -0.09
LSS-208ENST00000474319 ST20-MTHFSA0A0A6YYL1 179 aa14.46□□□□□ -0.09
LSS-208ENST00000474319 EHBP1L1Q8N3D4 1523 aa14.46□□□□□ -0.1
LSS-208ENST00000474319 PLIN1O60240 522 aa14.45□□□□□ -0.1
LSS-208ENST00000474319 CC2D1BQ5T0F9 858 aaKnown RBP14.45□□□□□ -0.1
LSS-208ENST00000474319 USP47Q96K76 1375 aa14.44□□□□□ -0.1
LSS-208ENST00000474319 ANP32AP39687 249 aaKnown RBP14.44□□□□□ -0.1
LSS-208ENST00000474319 CHD1O14646 1710 aa14.43□□□□□ -0.1
LSS-208ENST00000474319 NUDCQ9Y266 331 aa14.43□□□□□ -0.1
LSS-208ENST00000474319 RAPGEF6Q8TEU7 1601 aa14.43□□□□□ -0.1
LSS-208ENST00000474319 ANKRD30BQ9BXX2 1392 aa14.43□□□□□ -0.1
LSS-208ENST00000474319 SUPT6HQ7KZ85 1726 aaKnown RBP14.43□□□□□ -0.1
LSS-208ENST00000474319 NCOA1Q15788 1441 aa14.43□□□□□ -0.1
LSS-208ENST00000474319 EXOC6Q8TAG9 804 aa14.42□□□□□ -0.1
LSS-208ENST00000474319 RTN4Q9NQC3 1192 aaKnown RBP14.42□□□□□ -0.1
LSS-208ENST00000474319 NUP155O75694 1391 aa14.41□□□□□ -0.1
LSS-208ENST00000474319 EFCAB2Q5VUJ9 269 aa14.41□□□□□ -0.1
LSS-208ENST00000474319 CHGAP10645 457 aaKnown RBP14.4□□□□□ -0.1
LSS-208ENST00000474319 LRRIQ1Q96JM4 1722 aa14.4□□□□□ -0.1
LSS-208ENST00000474319 CDCA7LQ96GN5 454 aa14.4□□□□□ -0.1
LSS-208ENST00000474319 ZBTB47Q9UFB7 747 aaPredicted RBP14.4□□□□□ -0.1
LSS-208ENST00000474319 RTL5Q5HYW3 569 aaPredicted RBP14.4□□□□□ -0.1
LSS-208ENST00000474319 ABCC5O15440 1437 aa14.38□□□□□ -0.11
LSS-208ENST00000474319 DAPK1P53355 1430 aa14.38□□□□□ -0.11
LSS-208ENST00000474319 GPATCH8Q9UKJ3 1502 aaKnown RBP14.36□□□□□ -0.11
LSS-208ENST00000474319 KIF14Q15058 1648 aa14.36□□□□□ -0.11
LSS-208ENST00000474319 GGT6Q6P531 493 aa14.36□□□□□ -0.11
LSS-208ENST00000474319 PNISRQ8TF01 805 aaKnown RBP14.36□□□□□ -0.11
LSS-208ENST00000474319 ANKRD30AQ9BXX3 1397 aa14.35□□□□□ -0.11
LSS-208ENST00000474319 NBPF1Q3BBV0 1214 aa14.34□□□□□ -0.11
LSS-208ENST00000474319 ARHGAP5Q13017 1502 aa14.34□□□□□ -0.11
LSS-208ENST00000474319 MLECQ14165 292 aa14.34□□□□□ -0.11
LSS-208ENST00000474319 KIF3BO15066 747 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms