RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 TAOK2Q9UL54 1235 aa14□□□□□ -0.17
SSB-210ENST00000474273 NLRP6P59044 892 aa13.97□□□□□ -0.17
SSB-210ENST00000474273 BCL11BQ9C0K0 894 aaPredicted RBP13.97□□□□□ -0.17
SSB-210ENST00000474273 FBXO22Q8NEZ5 403 aa13.94□□□□□ -0.18
SSB-210ENST00000474273 VARS2Q5ST30 1063 aaKnown RBP13.93□□□□□ -0.18
SSB-210ENST00000474273 GPR153Q6NV75 609 aa13.92□□□□□ -0.18
SSB-210ENST00000474273 STK24Q9Y6E0 443 aa13.92□□□□□ -0.18
SSB-210ENST00000474273 MFRPQ9BY79 579 aa13.88□□□□□ -0.19
SSB-210ENST00000474273 STK25O00506 426 aa13.86□□□□□ -0.19
SSB-210ENST00000474273 ECM2O94769 699 aaPredicted RBP13.86□□□□□ -0.19
SSB-210ENST00000474273 ZNF687Q8N1G0 1237 aa13.86□□□□□ -0.19
SSB-210ENST00000474273 ARSIQ5FYB1 569 aa13.82□□□□□ -0.2
SSB-210ENST00000474273 KIF3CO14782 793 aa13.78□□□□□ -0.2
SSB-210ENST00000474273 PKD2Q13563 968 aa13.77□□□□□ -0.21
SSB-210ENST00000474273 RNF166Q96A37 237 aaPredicted RBP13.76□□□□□ -0.21
SSB-210ENST00000474273 C2orf72A6NCS6 295 aa13.75□□□□□ -0.21
SSB-210ENST00000474273 ZNF316A6NFI3 1004 aaPredicted RBP13.75□□□□□ -0.21
SSB-210ENST00000474273 RGL2O15211 777 aa13.75□□□□□ -0.21
SSB-210ENST00000474273 KHSRPQ92945 711 aaKnown RBP eCLIP13.75□□□□□ -0.214e-7■□□□□ 9.3
SSB-210ENST00000474273 MYT1LQ9UL68 1186 aa13.73□□□□□ -0.21
SSB-210ENST00000474273 PTGER2P43116 358 aa13.69□□□□□ -0.22
SSB-210ENST00000474273 SLC34A2O95436 690 aa13.66□□□□□ -0.22
SSB-210ENST00000474273 TMC2Q8TDI7 906 aa13.65□□□□□ -0.22
SSB-210ENST00000474273 NUDT7P0C024 238 aa13.64□□□□□ -0.23
SSB-210ENST00000474273 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
SSB-210ENST00000474273 PCDHGA4Q9Y5G9 962 aa13.62□□□□□ -0.23
SSB-210ENST00000474273 LSM11P83369 360 aaKnown RBP eCLIP13.61□□□□□ -0.23
SSB-210ENST00000474273 PPP1R37O75864 691 aa13.6□□□□□ -0.23
SSB-210ENST00000474273 PBX2P40425 430 aa13.59□□□□□ -0.23
SSB-210ENST00000474273 LHX6Q9UPM6 363 aa13.59□□□□□ -0.23
SSB-210ENST00000474273 POTEEQ6S8J3 1075 aa13.53□□□□□ -0.24
SSB-210ENST00000474273 HS6ST3Q8IZP7 471 aa13.5□□□□□ -0.25
SSB-210ENST00000474273 AXIN2Q9Y2T1 843 aa13.49□□□□□ -0.25
SSB-210ENST00000474273 PSDA5PKW4 1024 aaPredicted RBP13.48□□□□□ -0.25
SSB-210ENST00000474273 PTCD2Q8WV60 388 aaKnown RBP13.48□□□□□ -0.25
SSB-210ENST00000474273 KDM4FA0A1W2PPD8 638 aa13.46□□□□□ -0.25
SSB-210ENST00000474273 FOXK1P85037 733 aa13.46□□□□□ -0.25
SSB-210ENST00000474273 GPHNQ9NQX3 736 aaPredicted RBP13.44□□□□□ -0.26
SSB-210ENST00000474273 PLPP6Q8IY26 295 aa13.43□□□□□ -0.26
SSB-210ENST00000474273 ARHGAP33O14559 1287 aa13.42□□□□□ -0.26
SSB-210ENST00000474273 ADGRD1Q6QNK2 874 aa13.39□□□□□ -0.27
SSB-210ENST00000474273 DSG2Q14126 1118 aa13.38□□□□□ -0.27
SSB-210ENST00000474273 CHGAP10645 457 aaKnown RBP13.36□□□□□ -0.27
SSB-210ENST00000474273 TBC1D12O60347 775 aa13.35□□□□□ -0.27
SSB-210ENST00000474273 TK2O00142 265 aa13.34□□□□□ -0.27
SSB-210ENST00000474273 DNAJC5Q9H3Z4 198 aa13.34□□□□□ -0.27
SSB-210ENST00000474273 PPP4R3BQ5MIZ7 849 aa13.33□□□□□ -0.28
SSB-210ENST00000474273 HCSTQ9UBK5 93 aa13.32□□□□□ -0.28
SSB-210ENST00000474273 PSEN2P49810 448 aa13.31□□□□□ -0.28
SSB-210ENST00000474273 DMRTA1Q5VZB9 504 aa13.31□□□□□ -0.28
SSB-210ENST00000474273 NKX1-1Q15270 411 aaPredicted RBP13.3□□□□□ -0.28
SSB-210ENST00000474273 RYDENQ9NUL5 291 aaKnown RBP13.29□□□□□ -0.28
SSB-210ENST00000474273 HRO43593 1189 aa13.28□□□□□ -0.28
SSB-210ENST00000474273 OXER1Q8TDS5 423 aa13.26□□□□□ -0.29
SSB-210ENST00000474273 CRISPLD2Q9H0B8 497 aa13.25□□□□□ -0.29
SSB-210ENST00000474273 PLA2G2EQ9NZK7 142 aa13.25□□□□□ -0.29
SSB-210ENST00000474273 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
SSB-210ENST00000474273 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.29
SSB-210ENST00000474273 KCNK17Q96T54 332 aa13.21□□□□□ -0.29
SSB-210ENST00000474273 PPP1R15BQ5SWA1 713 aa13.19□□□□□ -0.3
SSB-210ENST00000474273 STAC3Q96MF2 364 aa13.17□□□□□ -0.3
SSB-210ENST00000474273 ZNF454Q8N9F8 522 aa13.16□□□□□ -0.3
SSB-210ENST00000474273 KCTD12Q96CX2 325 aaKnown RBP13.16□□□□□ -0.3
SSB-210ENST00000474273 VPS9D1Q9Y2B5 631 aa13.15□□□□□ -0.3
SSB-210ENST00000474273 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
SSB-210ENST00000474273 PDE4AP27815 886 aa13.14□□□□□ -0.31
SSB-210ENST00000474273 BCL2L12Q9HB09 334 aa13.14□□□□□ -0.31
SSB-210ENST00000474273 FOSBP53539 338 aa13.12□□□□□ -0.31
SSB-210ENST00000474273 SLC4A5Q9BY07 1137 aa13.12□□□□□ -0.31
SSB-210ENST00000474273 ANO8Q9HCE9 1232 aaPredicted RBP13.09□□□□□ -0.31
SSB-210ENST00000474273 GTPBP6O43824 516 aaPredicted RBP13.08□□□□□ -0.32
SSB-210ENST00000474273 PTPREP23469 700 aa13.07□□□□□ -0.32
SSB-210ENST00000474273 JPH4Q96JJ6 628 aa13.07□□□□□ -0.32
SSB-210ENST00000474273 EVI5O60447 810 aa13.05□□□□□ -0.32
SSB-210ENST00000474273 DDX27Q96GQ7 796 aaKnown RBP13.04□□□□□ -0.32
SSB-210ENST00000474273 LARP6Q9BRS8 491 aaKnown RBP13.04□□□□□ -0.32
SSB-210ENST00000474273 BHMG1C9JSJ3 638 aaPredicted RBP13.03□□□□□ -0.32
SSB-210ENST00000474273 ZBED2Q9BTP6 218 aa13.03□□□□□ -0.32
SSB-210ENST00000474273 MFSD10Q14728 455 aa13.02□□□□□ -0.33
SSB-210ENST00000474273 ZDHHC16Q969W1 377 aa13.02□□□□□ -0.33
SSB-210ENST00000474273 PTPN5P54829 565 aa13.01□□□□□ -0.33
SSB-210ENST00000474273 ADAM33Q9BZ11 813 aa12.99□□□□□ -0.33
SSB-210ENST00000474273 MAP3K9P80192 1104 aa12.97□□□□□ -0.33
SSB-210ENST00000474273 THSD4Q6ZMP0 1018 aa12.97□□□□□ -0.33
SSB-210ENST00000474273 MRPL50Q8N5N7 158 aaKnown RBP12.96□□□□□ -0.33
SSB-210ENST00000474273 GOLGA8CPA6NN73 597 aa12.95□□□□□ -0.34
SSB-210ENST00000474273 WNT2BQ93097 391 aa12.94□□□□□ -0.34
SSB-210ENST00000474273 NBPF3Q9H094 633 aa12.94□□□□□ -0.34
SSB-210ENST00000474273 EMILIN3Q9NT22 766 aa12.94□□□□□ -0.34
SSB-210ENST00000474273 IFFO2Q5TF58 517 aa12.92□□□□□ -0.34
SSB-210ENST00000474273 PPP1R3GB7ZBB8 358 aa12.9□□□□□ -0.34
SSB-210ENST00000474273 PCDHGA10Q9Y5H3 936 aa12.9□□□□□ -0.34
SSB-210ENST00000474273 DCAF8L2P0C7V8 631 aa12.88□□□□□ -0.35
SSB-210ENST00000474273 CADPS2Q86UW7 1296 aa12.87□□□□□ -0.35
SSB-210ENST00000474273 RABGEF1Q9UJ41 708 aa12.86□□□□□ -0.35
SSB-210ENST00000474273 RGS20O76081 388 aa12.85□□□□□ -0.35
SSB-210ENST00000474273 TYW1BQ6NUM6 668 aa12.85□□□□□ -0.35
SSB-210ENST00000474273 FBXW7Q969H0 707 aa12.85□□□□□ -0.35
SSB-210ENST00000474273 PHF14O94880 888 aa12.84□□□□□ -0.35
SSB-210ENST00000474273 COL9A1P20849 921 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms