RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 HS3ST6Q96QI5 342 aa11.6□□□□□ -0.55
TMEM50B-208ENST00000474272 DOK7Q18PE1 504 aa11.57□□□□□ -0.56
TMEM50B-208ENST00000474272 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
TMEM50B-208ENST00000474272 SPNS2Q8IVW8 549 aa11.52□□□□□ -0.57
TMEM50B-208ENST00000474272 KRTAP3-3Q9BYR6 98 aa11.51□□□□□ -0.57
TMEM50B-208ENST00000474272 KRTAP3-2Q9BYR7 98 aa11.51□□□□□ -0.57
TMEM50B-208ENST00000474272 ERBB3P21860 1342 aa11.5□□□□□ -0.57
TMEM50B-208ENST00000474272 RIMBP2O15034 1052 aa11.49□□□□□ -0.57
TMEM50B-208ENST00000474272 PPP1R37O75864 691 aa11.49□□□□□ -0.57
TMEM50B-208ENST00000474272 MMRN1Q13201 1228 aa11.47□□□□□ -0.57
TMEM50B-208ENST00000474272 C2orf72A6NCS6 295 aa11.46□□□□□ -0.57
TMEM50B-208ENST00000474272 ARSIQ5FYB1 569 aa11.46□□□□□ -0.57
TMEM50B-208ENST00000474272 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
TMEM50B-208ENST00000474272 KHSRPQ92945 711 aaKnown RBP eCLIP11.46□□□□□ -0.572e-26■□□□□ 9.9
TMEM50B-208ENST00000474272 VARS2Q5ST30 1063 aaKnown RBP11.45□□□□□ -0.58
TMEM50B-208ENST00000474272 KIF3CO14782 793 aa11.42□□□□□ -0.58
TMEM50B-208ENST00000474272 CHGAP10645 457 aaKnown RBP11.42□□□□□ -0.58
TMEM50B-208ENST00000474272 ZSWIM6Q9HCJ5 1215 aa11.41□□□□□ -0.58
TMEM50B-208ENST00000474272 HS6ST3Q8IZP7 471 aa11.39□□□□□ -0.59
TMEM50B-208ENST00000474272 TMC2Q8TDI7 906 aa11.36□□□□□ -0.59
TMEM50B-208ENST00000474272 NUDT7P0C024 238 aa11.32□□□□□ -0.6
TMEM50B-208ENST00000474272 NKX1-1Q15270 411 aaPredicted RBP11.32□□□□□ -0.6
TMEM50B-208ENST00000474272 ZNF687Q8N1G0 1237 aa11.31□□□□□ -0.6
TMEM50B-208ENST00000474272 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
TMEM50B-208ENST00000474272 PCDHGA4Q9Y5G9 962 aa11.28□□□□□ -0.6
TMEM50B-208ENST00000474272 LHX6Q9UPM6 363 aa11.25□□□□□ -0.61
TMEM50B-208ENST00000474272 SLC34A2O95436 690 aa11.24□□□□□ -0.61
TMEM50B-208ENST00000474272 PLPP6Q8IY26 295 aa11.23□□□□□ -0.61
TMEM50B-208ENST00000474272 DSG2Q14126 1118 aa11.22□□□□□ -0.61
TMEM50B-208ENST00000474272 ANKRD13DQ6ZTN6 518 aa11.22□□□□□ -0.61
TMEM50B-208ENST00000474272 GPHNQ9NQX3 736 aaPredicted RBP11.21□□□□□ -0.61
TMEM50B-208ENST00000474272 DCAF8L2P0C7V8 631 aa11.2□□□□□ -0.62
TMEM50B-208ENST00000474272 AXIN2Q9Y2T1 843 aa11.2□□□□□ -0.62
TMEM50B-208ENST00000474272 FOXK1P85037 733 aa11.19□□□□□ -0.62
TMEM50B-208ENST00000474272 DNAJC5Q9H3Z4 198 aa11.19□□□□□ -0.62
TMEM50B-208ENST00000474272 POTEEQ6S8J3 1075 aa11.18□□□□□ -0.62
TMEM50B-208ENST00000474272 PTCD2Q8WV60 388 aaKnown RBP11.15□□□□□ -0.62
TMEM50B-208ENST00000474272 RNF166Q96A37 237 aaPredicted RBP11.15□□□□□ -0.62
TMEM50B-208ENST00000474272 MYT1LQ9UL68 1186 aa11.15□□□□□ -0.62
TMEM50B-208ENST00000474272 LSM11P83369 360 aaKnown RBP eCLIP11.14□□□□□ -0.63
TMEM50B-208ENST00000474272 KDM4FA0A1W2PPD8 638 aa11.13□□□□□ -0.63
TMEM50B-208ENST00000474272 GTPBP6O43824 516 aaPredicted RBP11.13□□□□□ -0.63
TMEM50B-208ENST00000474272 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.63
TMEM50B-208ENST00000474272 RYDENQ9NUL5 291 aaKnown RBP11.1□□□□□ -0.63
TMEM50B-208ENST00000474272 CRISPLD2Q9H0B8 497 aa11.09□□□□□ -0.63
TMEM50B-208ENST00000474272 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
TMEM50B-208ENST00000474272 PBX2P40425 430 aa11.06□□□□□ -0.64
TMEM50B-208ENST00000474272 PPP1R15BQ5SWA1 713 aa11.06□□□□□ -0.64
TMEM50B-208ENST00000474272 TBC1D12O60347 775 aa11.05□□□□□ -0.64
TMEM50B-208ENST00000474272 PSEN2P49810 448 aa11.05□□□□□ -0.64
TMEM50B-208ENST00000474272 OXER1Q8TDS5 423 aa11.04□□□□□ -0.64
TMEM50B-208ENST00000474272 ARHGAP33O14559 1287 aa11.03□□□□□ -0.64
TMEM50B-208ENST00000474272 LARP6Q9BRS8 491 aaKnown RBP11.03□□□□□ -0.64
TMEM50B-208ENST00000474272 PDE4AP27815 886 aa11.02□□□□□ -0.65
TMEM50B-208ENST00000474272 DMRTA1Q5VZB9 504 aa11.02□□□□□ -0.65
TMEM50B-208ENST00000474272 PSDA5PKW4 1024 aaPredicted RBP11.01□□□□□ -0.65
TMEM50B-208ENST00000474272 PTGER2P43116 358 aa11□□□□□ -0.65
TMEM50B-208ENST00000474272 PPP4R3BQ5MIZ7 849 aa10.99□□□□□ -0.65
TMEM50B-208ENST00000474272 CADPS2Q86UW7 1296 aa10.99□□□□□ -0.65
TMEM50B-208ENST00000474272 ADGRD1Q6QNK2 874 aa10.98□□□□□ -0.65
TMEM50B-208ENST00000474272 KCNK17Q96T54 332 aa10.96□□□□□ -0.65
TMEM50B-208ENST00000474272 ZNF454Q8N9F8 522 aa10.95□□□□□ -0.66
TMEM50B-208ENST00000474272 DDX27Q96GQ7 796 aaKnown RBP10.95□□□□□ -0.66
TMEM50B-208ENST00000474272 EVI5O60447 810 aa10.91□□□□□ -0.66
TMEM50B-208ENST00000474272 MFSD10Q14728 455 aa10.9□□□□□ -0.66
TMEM50B-208ENST00000474272 EMILIN3Q9NT22 766 aa10.9□□□□□ -0.66
TMEM50B-208ENST00000474272 HRO43593 1189 aa10.89□□□□□ -0.67
TMEM50B-208ENST00000474272 MAP3K9P80192 1104 aa10.89□□□□□ -0.67
TMEM50B-208ENST00000474272 TK2O00142 265 aa10.88□□□□□ -0.67
TMEM50B-208ENST00000474272 FOSBP53539 338 aa10.88□□□□□ -0.67
TMEM50B-208ENST00000474272 ANO8Q9HCE9 1232 aaPredicted RBP10.87□□□□□ -0.67
TMEM50B-208ENST00000474272 KCNH8Q96L42 1107 aa10.85□□□□□ -0.67
TMEM50B-208ENST00000474272 BCL2L12Q9HB09 334 aa10.85□□□□□ -0.67
TMEM50B-208ENST00000474272 VPS9D1Q9Y2B5 631 aa10.85□□□□□ -0.67
TMEM50B-208ENST00000474272 KCTD12Q96CX2 325 aaKnown RBP10.84□□□□□ -0.67
TMEM50B-208ENST00000474272 ADAM33Q9BZ11 813 aa10.84□□□□□ -0.67
TMEM50B-208ENST00000474272 STAC3Q96MF2 364 aa10.83□□□□□ -0.68
TMEM50B-208ENST00000474272 BBXQ8WY36 941 aaPredicted RBP10.82□□□□□ -0.68
TMEM50B-208ENST00000474272 JPH4Q96JJ6 628 aa10.82□□□□□ -0.68
TMEM50B-208ENST00000474272 PTPREP23469 700 aa10.81□□□□□ -0.68
TMEM50B-208ENST00000474272 ZDHHC16Q969W1 377 aa10.81□□□□□ -0.68
TMEM50B-208ENST00000474272 HCSTQ9UBK5 93 aa10.81□□□□□ -0.68
TMEM50B-208ENST00000474272 RTN4Q9NQC3 1192 aaKnown RBP10.8□□□□□ -0.68
TMEM50B-208ENST00000474272 PCDHGA10Q9Y5H3 936 aa10.78□□□□□ -0.68
TMEM50B-208ENST00000474272 DPYSL4O14531 572 aa10.77□□□□□ -0.69
TMEM50B-208ENST00000474272 ZBED2Q9BTP6 218 aa10.77□□□□□ -0.69
TMEM50B-208ENST00000474272 PTPN5P54829 565 aa10.75□□□□□ -0.69
TMEM50B-208ENST00000474272 PLA2G2EQ9NZK7 142 aa10.75□□□□□ -0.69
TMEM50B-208ENST00000474272 SPRYD3Q8NCJ5 442 aa10.74□□□□□ -0.69
TMEM50B-208ENST00000474272 SLC4A5Q9BY07 1137 aa10.74□□□□□ -0.69
TMEM50B-208ENST00000474272 BHMG1C9JSJ3 638 aaPredicted RBP10.73□□□□□ -0.69
TMEM50B-208ENST00000474272 CAMK2BQ13554 666 aa10.73□□□□□ -0.69
TMEM50B-208ENST00000474272 AMER1Q5JTC6 1135 aaPredicted RBP10.73□□□□□ -0.69
TMEM50B-208ENST00000474272 COL9A1P20849 921 aa10.72□□□□□ -0.69
TMEM50B-208ENST00000474272 PROX2Q3B8N5 592 aa10.72□□□□□ -0.69
TMEM50B-208ENST00000474272 CFAP44Q96MT7 982 aa10.71□□□□□ -0.69
TMEM50B-208ENST00000474272 TYW1BQ6NUM6 668 aa10.7□□□□□ -0.7
TMEM50B-208ENST00000474272 PAXIP1Q6ZW49 1069 aaPredicted RBP10.69□□□□□ -0.7
TMEM50B-208ENST00000474272 MRPL50Q8N5N7 158 aaKnown RBP10.69□□□□□ -0.7
TMEM50B-208ENST00000474272 DDX12PQ92771 950 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms