RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 POGZQ7Z3K3 1410 aa17.86■□□□□ 0.45
CKS1B-206ENST00000474215 ARID4BQ4LE39 1312 aaPredicted RBP17.85■□□□□ 0.45
CKS1B-206ENST00000474215 ZMYM4Q5VZL5 1548 aa17.84■□□□□ 0.45
CKS1B-206ENST00000474215 MAGI2Q86UL8 1455 aa17.84■□□□□ 0.45
CKS1B-206ENST00000474215 MTUS2Q5JR59 1369 aa17.83■□□□□ 0.45
CKS1B-206ENST00000474215 AFAP1Q8N556 730 aa17.83■□□□□ 0.44
CKS1B-206ENST00000474215 YEATS2Q9ULM3 1422 aa17.81■□□□□ 0.44
CKS1B-206ENST00000474215 ZFYVE16Q7Z3T8 1539 aa17.81■□□□□ 0.44
CKS1B-206ENST00000474215 ARHGEF40Q8TER5 1519 aa17.81■□□□□ 0.44
CKS1B-206ENST00000474215 CDC42BPBQ9Y5S2 1711 aa17.81■□□□□ 0.44
CKS1B-206ENST00000474215 ZNF518AQ6AHZ1 1483 aa17.8■□□□□ 0.44
CKS1B-206ENST00000474215 PREX2Q70Z35 1606 aa17.8■□□□□ 0.44
CKS1B-206ENST00000474215 GPATCH8Q9UKJ3 1502 aaKnown RBP17.78■□□□□ 0.44
CKS1B-206ENST00000474215 ZNF777Q9ULD5 760 aaPredicted RBP17.78■□□□□ 0.44
CKS1B-206ENST00000474215 CCNB3Q8WWL7 1395 aa17.78■□□□□ 0.44
CKS1B-206ENST00000474215 CFDP1Q9UEE9 299 aaPredicted RBP17.77■□□□□ 0.44
CKS1B-206ENST00000474215 VPS8Q8N3P4 1428 aa17.76■□□□□ 0.43
CKS1B-206ENST00000474215 MYT1LQ9UL68 1186 aa17.76■□□□□ 0.43
CKS1B-206ENST00000474215 ARHGEF12Q9NZN5 1544 aa17.76■□□□□ 0.43
CKS1B-206ENST00000474215 ATP10AO60312 1499 aa17.75■□□□□ 0.43
CKS1B-206ENST00000474215 CDC42BPAQ5VT25 1732 aa17.75■□□□□ 0.43
CKS1B-206ENST00000474215 ADAMTSL3P82987 1691 aa17.74■□□□□ 0.43
CKS1B-206ENST00000474215 TRAPPC8Q9Y2L5 1435 aa17.74■□□□□ 0.43
CKS1B-206ENST00000474215 ABCC1P33527 1531 aa17.73■□□□□ 0.43
CKS1B-206ENST00000474215 BCORL1Q5H9F3 1711 aa17.73■□□□□ 0.43
CKS1B-206ENST00000474215 KDM5CP41229 1560 aa17.73■□□□□ 0.43
CKS1B-206ENST00000474215 EHBP1L1Q8N3D4 1523 aa17.72■□□□□ 0.43
CKS1B-206ENST00000474215 HNRNPMP52272 730 aaKnown RBP eCLIP17.72■□□□□ 0.43
CKS1B-206ENST00000474215 PTPRMP28827 1452 aa17.71■□□□□ 0.43
CKS1B-206ENST00000474215 MLH3Q9UHC1 1453 aa17.71■□□□□ 0.43
CKS1B-206ENST00000474215 C9orf84Q5VXU9 1444 aa17.71■□□□□ 0.43
CKS1B-206ENST00000474215 MLECQ14165 292 aa17.7■□□□□ 0.42
CKS1B-206ENST00000474215 KIAA1107Q9UPP5 1409 aa17.7■□□□□ 0.42
CKS1B-206ENST00000474215 SAMD9LQ8IVG5 1584 aa17.69■□□□□ 0.42
CKS1B-206ENST00000474215 PLEKHH2Q8IVE3 1493 aa17.69■□□□□ 0.42
CKS1B-206ENST00000474215 TIAM1Q13009 1591 aa17.68■□□□□ 0.42
CKS1B-206ENST00000474215 ITSN2Q9NZM3 1697 aa17.67■□□□□ 0.42
CKS1B-206ENST00000474215 SIGLEC1Q9BZZ2 1709 aa17.67■□□□□ 0.42
CKS1B-206ENST00000474215 HECW2Q9P2P5 1572 aa17.67■□□□□ 0.42
CKS1B-206ENST00000474215 MADDQ8WXG6 1647 aa17.67■□□□□ 0.42
CKS1B-206ENST00000474215 ZNF644Q9H582 1327 aaPredicted RBP17.67■□□□□ 0.42
CKS1B-206ENST00000474215 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
CKS1B-206ENST00000474215 SYCP2Q9BX26 1530 aa17.66■□□□□ 0.42
CKS1B-206ENST00000474215 SPAG9O60271 1321 aaKnown RBP17.66■□□□□ 0.42
CKS1B-206ENST00000474215 LRRC9Q6ZRR7 1453 aa17.64■□□□□ 0.41
CKS1B-206ENST00000474215 DIP2CQ9Y2E4 1556 aa17.64■□□□□ 0.41
CKS1B-206ENST00000474215 MAP3K1Q13233 1512 aa17.63■□□□□ 0.41
CKS1B-206ENST00000474215 KANK4Q5T7N3 995 aaPredicted RBP17.63■□□□□ 0.41
CKS1B-206ENST00000474215 SUPT6HQ7KZ85 1726 aaKnown RBP17.62■□□□□ 0.41
CKS1B-206ENST00000474215 REREQ9P2R6 1566 aa17.62■□□□□ 0.41
CKS1B-206ENST00000474215 ABCA6Q8N139 1617 aa17.61■□□□□ 0.41
CKS1B-206ENST00000474215 APLP2Q06481 763 aa17.61■□□□□ 0.41
CKS1B-206ENST00000474215 KIDINS220Q9ULH0 1771 aa17.61■□□□□ 0.41
CKS1B-206ENST00000474215 RIMS1Q86UR5 1692 aaKnown RBP17.6■□□□□ 0.41
CKS1B-206ENST00000474215 MBD5Q9P267 1494 aa17.59■□□□□ 0.41
CKS1B-206ENST00000474215 PLPPR3Q6T4P5 718 aa17.59■□□□□ 0.41
CKS1B-206ENST00000474215 AGLP35573 1532 aa17.58■□□□□ 0.41
CKS1B-206ENST00000474215 RSPH4AQ5TD94 716 aa17.57■□□□□ 0.4
CKS1B-206ENST00000474215 ATP7AQ04656 1500 aa17.56■□□□□ 0.4
CKS1B-206ENST00000474215 FER1L4A9Z1Z3 1794 aa17.54■□□□□ 0.4
CKS1B-206ENST00000474215 ESF1Q9H501 851 aaKnown RBP17.54■□□□□ 0.4
CKS1B-206ENST00000474215 CAMSAP2Q08AD1 1489 aa17.54■□□□□ 0.4
CKS1B-206ENST00000474215 CEBPAP49715 358 aaPredicted RBP17.53■□□□□ 0.4
CKS1B-206ENST00000474215 RTEL1-TNFRSF6BF6WH68 1400 aa17.53■□□□□ 0.4
CKS1B-206ENST00000474215 INO80Q9ULG1 1556 aaPredicted RBP17.53■□□□□ 0.4
CKS1B-206ENST00000474215 A2MP01023 1474 aa17.51■□□□□ 0.39
CKS1B-206ENST00000474215 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
CKS1B-206ENST00000474215 MYOM3Q5VTT5 1437 aa17.5■□□□□ 0.39
CKS1B-206ENST00000474215 TSPY4P0CV99 314 aa17.5■□□□□ 0.39
CKS1B-206ENST00000474215 TSPY10P0CW01 314 aa17.5■□□□□ 0.39
CKS1B-206ENST00000474215 MIA2Q96PC5 1412 aa17.49■□□□□ 0.39
CKS1B-206ENST00000474215 LMTK3Q96Q04 1460 aa17.49■□□□□ 0.39
CKS1B-206ENST00000474215 DHX29Q7Z478 1369 aaKnown RBP17.47■□□□□ 0.39
CKS1B-206ENST00000474215 CNTLNQ9NXG0 1405 aa17.47■□□□□ 0.39
CKS1B-206ENST00000474215 PLXNC1O60486 1568 aa17.46■□□□□ 0.39
CKS1B-206ENST00000474215 GGT6Q6P531 493 aa17.46■□□□□ 0.39
CKS1B-206ENST00000474215 ARHGEF5Q12774 1597 aa17.45■□□□□ 0.38
CKS1B-206ENST00000474215 ADGBQ8N7X0 1667 aa17.45■□□□□ 0.38
CKS1B-206ENST00000474215 HSPA2P54652 639 aa17.44■□□□□ 0.38
CKS1B-206ENST00000474215 PPP6R1Q9UPN7 881 aa17.44■□□□□ 0.38
CKS1B-206ENST00000474215 ZMYM3Q14202 1370 aa17.41■□□□□ 0.38
CKS1B-206ENST00000474215 KIF3BO15066 747 aa17.41■□□□□ 0.38
CKS1B-206ENST00000474215 C3P01024 1663 aa17.39■□□□□ 0.37
CKS1B-206ENST00000474215 UHRF1BP1Q6BDS2 1440 aa17.38■□□□□ 0.37
CKS1B-206ENST00000474215 FGD6Q6ZV73 1430 aa17.38■□□□□ 0.37
CKS1B-206ENST00000474215 MAST1Q9Y2H9 1570 aa17.36■□□□□ 0.37
CKS1B-206ENST00000474215 PREX1Q8TCU6 1659 aa17.36■□□□□ 0.37
CKS1B-206ENST00000474215 NPATQ14207 1427 aa17.35■□□□□ 0.37
CKS1B-206ENST00000474215 PTPN23Q9H3S7 1636 aa17.35■□□□□ 0.37
CKS1B-206ENST00000474215 MROH2AA6NES4 1674 aa17.35■□□□□ 0.37
CKS1B-206ENST00000474215 SETD1BQ9UPS6 1966 aaKnown RBP17.35■□□□□ 0.37
CKS1B-206ENST00000474215 ABCC5O15440 1437 aa17.34■□□□□ 0.37
CKS1B-206ENST00000474215 CLTCQ00610 1675 aaKnown RBP17.33■□□□□ 0.37
CKS1B-206ENST00000474215 TCOF1Q13428 1488 aaKnown RBP17.33■□□□□ 0.37
CKS1B-206ENST00000474215 WASHC2CQ9Y4E1 1318 aa17.33■□□□□ 0.36
CKS1B-206ENST00000474215 SENP3Q9H4L4 574 aaPredicted RBP17.32■□□□□ 0.36
CKS1B-206ENST00000474215 RRP7BPQ9NSQ0 103 aa17.31■□□□□ 0.36
CKS1B-206ENST00000474215 DAPK1P53355 1430 aa17.3■□□□□ 0.36
CKS1B-206ENST00000474215 PTPRKQ15262 1439 aa17.3■□□□□ 0.36
CKS1B-206ENST00000474215 SHANK2Q9UPX8 1470 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms