RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ABCA9Q8IUA7 1624 aa15.47■□□□□ 0.07
PRPF38A-202ENST00000474048 ITGAEP38570 1179 aa15.47■□□□□ 0.07
PRPF38A-202ENST00000474048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.47■□□□□ 0.07
PRPF38A-202ENST00000474048 CAMSAP2Q08AD1 1489 aa15.45■□□□□ 0.06
PRPF38A-202ENST00000474048 TCOF1Q13428 1488 aaKnown RBP15.45■□□□□ 0.06
PRPF38A-202ENST00000474048 CFAP74Q9C0B2 1584 aa15.45■□□□□ 0.06
PRPF38A-202ENST00000474048 CDC42BPBQ9Y5S2 1711 aa15.44■□□□□ 0.06
PRPF38A-202ENST00000474048 DNAJC5Q9H3Z4 198 aa15.44■□□□□ 0.06
PRPF38A-202ENST00000474048 PLEKHH2Q8IVE3 1493 aa15.43■□□□□ 0.06
PRPF38A-202ENST00000474048 EFCAB2Q5VUJ9 269 aa15.42■□□□□ 0.06
PRPF38A-202ENST00000474048 ARAP3Q8WWN8 1544 aa15.42■□□□□ 0.06
PRPF38A-202ENST00000474048 PLCH2O75038 1416 aa15.41■□□□□ 0.06
PRPF38A-202ENST00000474048 CD109Q6YHK3 1445 aa15.39■□□□□ 0.05
PRPF38A-202ENST00000474048 DNMT1P26358 1616 aaKnown RBP15.39■□□□□ 0.05
PRPF38A-202ENST00000474048 GLI2P10070 1586 aa15.38■□□□□ 0.05
PRPF38A-202ENST00000474048 DIP2BQ9P265 1576 aa15.38■□□□□ 0.05
PRPF38A-202ENST00000474048 FANCAO15360 1455 aa15.38■□□□□ 0.05
PRPF38A-202ENST00000474048 SAMD9LQ8IVG5 1584 aa15.37■□□□□ 0.05
PRPF38A-202ENST00000474048 FAM69CQ0P6D2 419 aa15.37■□□□□ 0.05
PRPF38A-202ENST00000474048 CROCC2H7BZ55 1655 aa15.36■□□□□ 0.05
PRPF38A-202ENST00000474048 MAP3K4Q9Y6R4 1608 aa15.35■□□□□ 0.05
PRPF38A-202ENST00000474048 DAPK1P53355 1430 aa15.35■□□□□ 0.05
PRPF38A-202ENST00000474048 SYCP2Q9BX26 1530 aa15.35■□□□□ 0.05
PRPF38A-202ENST00000474048 RSPH4AQ5TD94 716 aa15.35■□□□□ 0.05
PRPF38A-202ENST00000474048 ADGBQ8N7X0 1667 aa15.35■□□□□ 0.05
PRPF38A-202ENST00000474048 ARHGEF5Q12774 1597 aa15.34■□□□□ 0.05
PRPF38A-202ENST00000474048 TSPY4P0CV99 314 aa15.34■□□□□ 0.05
PRPF38A-202ENST00000474048 TSPY10P0CW01 314 aa15.34■□□□□ 0.05
PRPF38A-202ENST00000474048 ZNF644Q9H582 1327 aaPredicted RBP15.34■□□□□ 0.05
PRPF38A-202ENST00000474048 CCDC141Q6ZP82 1450 aa15.33■□□□□ 0.05
PRPF38A-202ENST00000474048 ADGRL1O94910 1474 aa15.33■□□□□ 0.04
PRPF38A-202ENST00000474048 TEX14Q8IWB6 1497 aa15.33■□□□□ 0.04
PRPF38A-202ENST00000474048 ABCC1P33527 1531 aa15.33■□□□□ 0.04
PRPF38A-202ENST00000474048 TSPOAP1O95153 1857 aa15.32■□□□□ 0.04
PRPF38A-202ENST00000474048 KIAA1107Q9UPP5 1409 aa15.32■□□□□ 0.04
PRPF38A-202ENST00000474048 SHANK2Q9UPX8 1470 aa15.31■□□□□ 0.04
PRPF38A-202ENST00000474048 NEO1Q92859 1461 aa15.3■□□□□ 0.04
PRPF38A-202ENST00000474048 KIF13AQ9H1H9 1805 aa15.3■□□□□ 0.04
PRPF38A-202ENST00000474048 CHIC2Q9UKJ5 165 aa15.3■□□□□ 0.04
PRPF38A-202ENST00000474048 MYT1LQ9UL68 1186 aa15.3■□□□□ 0.04
PRPF38A-202ENST00000474048 AKNAQ7Z591 1439 aa15.29■□□□□ 0.04
PRPF38A-202ENST00000474048 HNRNPMP52272 730 aaKnown RBP eCLIP15.29■□□□□ 0.04
PRPF38A-202ENST00000474048 ABCC5O15440 1437 aa15.28■□□□□ 0.04
PRPF38A-202ENST00000474048 C9orf84Q5VXU9 1444 aa15.28■□□□□ 0.04
PRPF38A-202ENST00000474048 ANKRD30AQ9BXX3 1397 aa15.28■□□□□ 0.04
PRPF38A-202ENST00000474048 GCC2Q8IWJ2 1684 aa15.28■□□□□ 0.04
PRPF38A-202ENST00000474048 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
PRPF38A-202ENST00000474048 SCAPERQ9BY12 1400 aa15.26■□□□□ 0.03
PRPF38A-202ENST00000474048 SETD5Q9C0A6 1442 aa15.26■□□□□ 0.03
PRPF38A-202ENST00000474048 ROCK1Q13464 1354 aa15.26■□□□□ 0.03
PRPF38A-202ENST00000474048 ZNF518AQ6AHZ1 1483 aa15.25■□□□□ 0.03
PRPF38A-202ENST00000474048 HFM1A2PYH4 1435 aa15.25■□□□□ 0.03
PRPF38A-202ENST00000474048 MBD5Q9P267 1494 aa15.24■□□□□ 0.03
PRPF38A-202ENST00000474048 MAST1Q9Y2H9 1570 aa15.24■□□□□ 0.03
PRPF38A-202ENST00000474048 ACIN1Q9UKV3 1341 aaKnown RBP15.23■□□□□ 0.03
PRPF38A-202ENST00000474048 RRP7BPQ9NSQ0 103 aa15.23■□□□□ 0.03
PRPF38A-202ENST00000474048 SPAG9O60271 1321 aaKnown RBP15.22■□□□□ 0.03
PRPF38A-202ENST00000474048 DENND4BO75064 1496 aaPredicted RBP15.22■□□□□ 0.03
PRPF38A-202ENST00000474048 ADGRL2O95490 1459 aa15.22■□□□□ 0.03
PRPF38A-202ENST00000474048 PTPRKQ15262 1439 aa15.22■□□□□ 0.03
PRPF38A-202ENST00000474048 RAB3GAP2Q9H2M9 1393 aa15.21■□□□□ 0.02
PRPF38A-202ENST00000474048 PLXNC1O60486 1568 aa15.2■□□□□ 0.02
PRPF38A-202ENST00000474048 CCER1Q8TC90 406 aaPredicted RBP15.2■□□□□ 0.02
PRPF38A-202ENST00000474048 ARHGEF12Q9NZN5 1544 aa15.2■□□□□ 0.02
PRPF38A-202ENST00000474048 PPRC1Q5VV67 1664 aaKnown RBP15.19■□□□□ 0.02
PRPF38A-202ENST00000474048 NAIPQ13075 1403 aa15.19■□□□□ 0.02
PRPF38A-202ENST00000474048 POGZQ7Z3K3 1410 aa15.19■□□□□ 0.02
PRPF38A-202ENST00000474048 TRAPPC8Q9Y2L5 1435 aa15.19■□□□□ 0.02
PRPF38A-202ENST00000474048 KIF15Q9NS87 1388 aa15.19■□□□□ 0.02
PRPF38A-202ENST00000474048 ATP7AQ04656 1500 aa15.18■□□□□ 0.02
PRPF38A-202ENST00000474048 HECW2Q9P2P5 1572 aa15.18■□□□□ 0.02
PRPF38A-202ENST00000474048 RTEL1-TNFRSF6BF6WH68 1400 aa15.17■□□□□ 0.02
PRPF38A-202ENST00000474048 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
PRPF38A-202ENST00000474048 ZFYVE16Q7Z3T8 1539 aa15.17■□□□□ 0.02
PRPF38A-202ENST00000474048 INO80Q9ULG1 1556 aaPredicted RBP15.16■□□□□ 0.02
PRPF38A-202ENST00000474048 AFAP1Q8N556 730 aa15.16■□□□□ 0.02
PRPF38A-202ENST00000474048 HRCP23327 699 aa15.15■□□□□ 0.02
PRPF38A-202ENST00000474048 TRIM52Q96A61 297 aa15.15■□□□□ 0.02
PRPF38A-202ENST00000474048 DUOX2Q9NRD8 1548 aa15.15■□□□□ 0.02
PRPF38A-202ENST00000474048 KDM5CP41229 1560 aa15.15■□□□□ 0.02
PRPF38A-202ENST00000474048 RICTORQ6R327 1708 aa15.14■□□□□ 0.01
PRPF38A-202ENST00000474048 ANKRD50Q9ULJ7 1429 aa15.14■□□□□ 0.01
PRPF38A-202ENST00000474048 ERBINQ96RT1 1412 aa15.11■□□□□ 0.01
PRPF38A-202ENST00000474048 MLH3Q9UHC1 1453 aa15.1■□□□□ 0.01
PRPF38A-202ENST00000474048 RAPGEF3O95398 923 aa15.1■□□□□ 0.01
PRPF38A-202ENST00000474048 KIDINS220Q9ULH0 1771 aa15.1■□□□□ 0.01
PRPF38A-202ENST00000474048 ZMYM4Q5VZL5 1548 aa15.08■□□□□ 0.01
PRPF38A-202ENST00000474048 MAGI2Q86UL8 1455 aa15.08■□□□□ 0
PRPF38A-202ENST00000474048 KDM6BO15054 1643 aa15.07■□□□□ 0
PRPF38A-202ENST00000474048 EIF2AK4Q9P2K8 1649 aaKnown RBP15.07■□□□□ 0
PRPF38A-202ENST00000474048 FRMPD1Q5SYB0 1578 aa15.07■□□□□ 0
PRPF38A-202ENST00000474048 ZEB1P37275 1124 aaPredicted RBP15.06■□□□□ 0
PRPF38A-202ENST00000474048 ABCA6Q8N139 1617 aa15.06■□□□□ 0
PRPF38A-202ENST00000474048 A2MP01023 1474 aa15.05■□□□□ -0
PRPF38A-202ENST00000474048 KANK1Q14678 1352 aa15.04■□□□□ -0
PRPF38A-202ENST00000474048 DHX57Q6P158 1386 aaKnown RBP15.04■□□□□ -0
PRPF38A-202ENST00000474048 DIP2CQ9Y2E4 1556 aa15.03■□□□□ -0
PRPF38A-202ENST00000474048 DHX29Q7Z478 1369 aaKnown RBP15.03■□□□□ -0
PRPF38A-202ENST00000474048 CLSPNQ9HAW4 1339 aa15.03■□□□□ -0
PRPF38A-202ENST00000474048 UNC13BO14795 1591 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms