RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 SNPHO15079 494 aa11.64□□□□□ -0.55
CNOT4-209ENST00000473470 CRISPLD2Q9H0B8 497 aa11.63□□□□□ -0.55
CNOT4-209ENST00000473470 KIF3CO14782 793 aa11.62□□□□□ -0.55
CNOT4-209ENST00000473470 TMEM92Q6UXU6 159 aa11.62□□□□□ -0.55
CNOT4-209ENST00000473470 PDE4AP27815 886 aa11.61□□□□□ -0.55
CNOT4-209ENST00000473470 GPHNQ9NQX3 736 aaPredicted RBP11.61□□□□□ -0.55
CNOT4-209ENST00000473470 C2orf72A6NCS6 295 aa11.6□□□□□ -0.55
CNOT4-209ENST00000473470 FOXK1P85037 733 aa11.57□□□□□ -0.56
CNOT4-209ENST00000473470 DOK7Q18PE1 504 aa11.57□□□□□ -0.56
CNOT4-209ENST00000473470 RIMBP2O15034 1052 aa11.56□□□□□ -0.56
CNOT4-209ENST00000473470 DDX27Q96GQ7 796 aaKnown RBP11.56□□□□□ -0.56
CNOT4-209ENST00000473470 NCKAP5LQ9HCH0 1330 aa11.56□□□□□ -0.56
CNOT4-209ENST00000473470 MFSD10Q14728 455 aa11.55□□□□□ -0.56
CNOT4-209ENST00000473470 PPP1R15BQ5SWA1 713 aa11.54□□□□□ -0.56
CNOT4-209ENST00000473470 CADPS2Q86UW7 1296 aa11.54□□□□□ -0.56
CNOT4-209ENST00000473470 HAP1P54257 671 aaPredicted RBP11.52□□□□□ -0.57
CNOT4-209ENST00000473470 LARP6Q9BRS8 491 aaKnown RBP11.51□□□□□ -0.57
CNOT4-209ENST00000473470 DSG2Q14126 1118 aa11.5□□□□□ -0.57
CNOT4-209ENST00000473470 ZSWIM6Q9HCJ5 1215 aa11.5□□□□□ -0.57
CNOT4-209ENST00000473470 TSHZ2Q9NRE2 1034 aa11.5□□□□□ -0.57
CNOT4-209ENST00000473470 PLPP6Q8IY26 295 aa11.49□□□□□ -0.57
CNOT4-209ENST00000473470 ZNF710Q8N1W2 664 aa11.49□□□□□ -0.57
CNOT4-209ENST00000473470 WDR70Q9NW82 654 aa11.48□□□□□ -0.57
CNOT4-209ENST00000473470 SLC34A2O95436 690 aa11.47□□□□□ -0.57
CNOT4-209ENST00000473470 HOXB3P14651 431 aaPredicted RBP11.46□□□□□ -0.57
CNOT4-209ENST00000473470 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
CNOT4-209ENST00000473470 P3H3Q8IVL6 736 aa11.4□□□□□ -0.58
CNOT4-209ENST00000473470 TBC1D12O60347 775 aa11.39□□□□□ -0.59
CNOT4-209ENST00000473470 CAMK2BQ13554 666 aa11.39□□□□□ -0.59
CNOT4-209ENST00000473470 PTCD2Q8WV60 388 aaKnown RBP11.39□□□□□ -0.59
CNOT4-209ENST00000473470 ST18O60284 1047 aa11.37□□□□□ -0.59
CNOT4-209ENST00000473470 HOXB1P14653 301 aaPredicted RBP11.37□□□□□ -0.59
CNOT4-209ENST00000473470 E2F4Q16254 413 aa11.37□□□□□ -0.59
CNOT4-209ENST00000473470 VSIG10Q8N0Z9 540 aa11.37□□□□□ -0.59
CNOT4-209ENST00000473470 FAM163AQ96GL9 167 aaPredicted RBP11.37□□□□□ -0.59
CNOT4-209ENST00000473470 OXER1Q8TDS5 423 aa11.36□□□□□ -0.59
CNOT4-209ENST00000473470 PCDHGA4Q9Y5G9 962 aa11.36□□□□□ -0.59
CNOT4-209ENST00000473470 UPF1Q92900 1129 aaKnown RBP eCLIP11.33□□□□□ -0.6
CNOT4-209ENST00000473470 EMP3P54852 163 aa11.32□□□□□ -0.6
CNOT4-209ENST00000473470 GPR153Q6NV75 609 aa11.32□□□□□ -0.6
CNOT4-209ENST00000473470 LCE2DQ5TA82 110 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-209ENST00000473470 ARIH1Q9Y4X5 557 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-209ENST00000473470 EMILIN3Q9NT22 766 aa11.3□□□□□ -0.6
CNOT4-209ENST00000473470 ARSIQ5FYB1 569 aa11.29□□□□□ -0.6
CNOT4-209ENST00000473470 PSDA5PKW4 1024 aaPredicted RBP11.28□□□□□ -0.6
CNOT4-209ENST00000473470 MAP3K9P80192 1104 aa11.28□□□□□ -0.6
CNOT4-209ENST00000473470 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
CNOT4-209ENST00000473470 NUDT7P0C024 238 aa11.26□□□□□ -0.61
CNOT4-209ENST00000473470 DPYSL4O14531 572 aa11.25□□□□□ -0.61
CNOT4-209ENST00000473470 PDIA6Q15084 440 aa11.25□□□□□ -0.61
CNOT4-209ENST00000473470 KCNV2Q8TDN2 545 aa11.25□□□□□ -0.61
CNOT4-209ENST00000473470 ARHGEF1Q92888 912 aaKnown RBP11.25□□□□□ -0.61
CNOT4-209ENST00000473470 SPDYE16A6NNV3 312 aaPredicted RBP11.24□□□□□ -0.61
CNOT4-209ENST00000473470 MARVELD3Q96A59 401 aa11.23□□□□□ -0.61
CNOT4-209ENST00000473470 EVI5O60447 810 aa11.22□□□□□ -0.61
CNOT4-209ENST00000473470 ERBB3P21860 1342 aa11.22□□□□□ -0.61
CNOT4-209ENST00000473470 KDM2AQ9Y2K7 1162 aa11.22□□□□□ -0.61
CNOT4-209ENST00000473470 POTEMA6NI47 508 aa11.21□□□□□ -0.61
CNOT4-209ENST00000473470 POTEGQ6S5H5 508 aa11.21□□□□□ -0.61
CNOT4-209ENST00000473470 KDM4FA0A1W2PPD8 638 aa11.2□□□□□ -0.62
CNOT4-209ENST00000473470 KHSRPQ92945 711 aaKnown RBP eCLIP11.2□□□□□ -0.62
CNOT4-209ENST00000473470 FAM205CA6NFA0 338 aa11.18□□□□□ -0.62
CNOT4-209ENST00000473470 JPH4Q96JJ6 628 aa11.18□□□□□ -0.62
CNOT4-209ENST00000473470 HS3ST6Q96QI5 342 aa11.18□□□□□ -0.62
CNOT4-209ENST00000473470 PPP4R3BQ5MIZ7 849 aa11.17□□□□□ -0.62
CNOT4-209ENST00000473470 VARS2Q5ST30 1063 aaKnown RBP11.17□□□□□ -0.62
CNOT4-209ENST00000473470 ANO8Q9HCE9 1232 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-209ENST00000473470 LHX6Q9UPM6 363 aa11.17□□□□□ -0.62
CNOT4-209ENST00000473470 PTGER2P43116 358 aa11.13□□□□□ -0.63
CNOT4-209ENST00000473470 PHF14O94880 888 aa11.12□□□□□ -0.63
CNOT4-209ENST00000473470 ZNF454Q8N9F8 522 aa11.12□□□□□ -0.63
CNOT4-209ENST00000473470 KCNH8Q96L42 1107 aa11.12□□□□□ -0.63
CNOT4-209ENST00000473470 PBX2P40425 430 aa11.11□□□□□ -0.63
CNOT4-209ENST00000473470 FOSBP53539 338 aa11.11□□□□□ -0.63
CNOT4-209ENST00000473470 FBXW7Q969H0 707 aa11.11□□□□□ -0.63
CNOT4-209ENST00000473470 PCDH10Q9P2E7 1040 aa11.11□□□□□ -0.63
CNOT4-209ENST00000473470 EPAS1Q99814 870 aa11.1□□□□□ -0.63
CNOT4-209ENST00000473470 ZNF687Q8N1G0 1237 aa11.09□□□□□ -0.63
CNOT4-209ENST00000473470 TYW1BQ6NUM6 668 aa11.08□□□□□ -0.64
CNOT4-209ENST00000473470 ZDHHC16Q969W1 377 aa11.07□□□□□ -0.64
CNOT4-209ENST00000473470 NBR1Q14596 966 aa11.05□□□□□ -0.64
CNOT4-209ENST00000473470 BCL2L12Q9HB09 334 aa11.05□□□□□ -0.64
CNOT4-209ENST00000473470 CDAN1Q8IWY9 1227 aa11.04□□□□□ -0.64
CNOT4-209ENST00000473470 DDX12PQ92771 950 aa11.04□□□□□ -0.64
CNOT4-209ENST00000473470 PCDHGA10Q9Y5H3 936 aa11.04□□□□□ -0.64
CNOT4-209ENST00000473470 POTEB3A0JP26 581 aa11.02□□□□□ -0.65
CNOT4-209ENST00000473470 TULP1O00294 542 aaPredicted RBP11.02□□□□□ -0.65
CNOT4-209ENST00000473470 SMYD5Q6GMV2 418 aa11.02□□□□□ -0.65
CNOT4-209ENST00000473470 POTEBQ6S5H4 581 aa11.02□□□□□ -0.65
CNOT4-209ENST00000473470 PTPREP23469 700 aa11.01□□□□□ -0.65
CNOT4-209ENST00000473470 EN1Q05925 392 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-209ENST00000473470 GRXCR2A6NFK2 248 aa11□□□□□ -0.65
CNOT4-209ENST00000473470 ARHGAP33O14559 1287 aa10.99□□□□□ -0.65
CNOT4-209ENST00000473470 TESPA1A2RU30 521 aaPredicted RBP10.98□□□□□ -0.65
CNOT4-209ENST00000473470 SEMA3EO15041 775 aa10.97□□□□□ -0.65
CNOT4-209ENST00000473470 MAP3K7O43318 606 aa10.97□□□□□ -0.65
CNOT4-209ENST00000473470 KCNK17Q96T54 332 aa10.97□□□□□ -0.65
CNOT4-209ENST00000473470 ADAM33Q9BZ11 813 aa10.97□□□□□ -0.65
CNOT4-209ENST00000473470 PPP1R3GB7ZBB8 358 aa10.96□□□□□ -0.65
CNOT4-209ENST00000473470 MLLT3P42568 568 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms