RNA–Protein interactions for RNA: ENST00000470650.1

CCDC93-206, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-206ENST00000470650 RYDENQ9NUL5 291 aaKnown RBP13.15□□□□□ -0.3
CCDC93-206ENST00000470650 HOXB3P14651 431 aaPredicted RBP13.12□□□□□ -0.31
CCDC93-206ENST00000470650 KIF3CO14782 793 aa13.11□□□□□ -0.31
CCDC93-206ENST00000470650 SNPHO15079 494 aa13.11□□□□□ -0.31
CCDC93-206ENST00000470650 CFAP44Q96MT7 982 aa13.11□□□□□ -0.31
CCDC93-206ENST00000470650 PAXIP1Q6ZW49 1069 aaPredicted RBP13.09□□□□□ -0.31
CCDC93-206ENST00000470650 TMC2Q8TDI7 906 aa13.09□□□□□ -0.31
CCDC93-206ENST00000470650 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.08□□□□□ -0.32
CCDC93-206ENST00000470650 SPRYD3Q8NCJ5 442 aa13.07□□□□□ -0.32
CCDC93-206ENST00000470650 POTEMA6NI47 508 aa13.06□□□□□ -0.32
CCDC93-206ENST00000470650 POTEGQ6S5H5 508 aa13.06□□□□□ -0.32
CCDC93-206ENST00000470650 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
CCDC93-206ENST00000470650 MARVELD3Q96A59 401 aa13.06□□□□□ -0.32
CCDC93-206ENST00000470650 CCDC180Q9P1Z9 1646 aa13.04□□□□□ -0.32
CCDC93-206ENST00000470650 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
CCDC93-206ENST00000470650 ZNF710Q8N1W2 664 aa13.01□□□□□ -0.33
CCDC93-206ENST00000470650 GPHNQ9NQX3 736 aaPredicted RBP13.01□□□□□ -0.33
CCDC93-206ENST00000470650 NCKAP5LQ9HCH0 1330 aa13.01□□□□□ -0.33
CCDC93-206ENST00000470650 DSG2Q14126 1118 aa13□□□□□ -0.33
CCDC93-206ENST00000470650 KHSRPQ92945 711 aaKnown RBP eCLIP12.98□□□□□ -0.33
CCDC93-206ENST00000470650 PLPP6Q8IY26 295 aa12.97□□□□□ -0.33
CCDC93-206ENST00000470650 CRISPLD2Q9H0B8 497 aa12.97□□□□□ -0.33
CCDC93-206ENST00000470650 FOXK1P85037 733 aa12.95□□□□□ -0.34
CCDC93-206ENST00000470650 ARSIQ5FYB1 569 aa12.95□□□□□ -0.34
CCDC93-206ENST00000470650 LARP6Q9BRS8 491 aaKnown RBP12.95□□□□□ -0.34
CCDC93-206ENST00000470650 PDE4AP27815 886 aa12.93□□□□□ -0.34
CCDC93-206ENST00000470650 GPR153Q6NV75 609 aa12.93□□□□□ -0.34
CCDC93-206ENST00000470650 RIMBP2O15034 1052 aa12.92□□□□□ -0.34
CCDC93-206ENST00000470650 EMP3P54852 163 aa12.92□□□□□ -0.34
CCDC93-206ENST00000470650 HOXB1P14653 301 aaPredicted RBP12.91□□□□□ -0.34
CCDC93-206ENST00000470650 PPP1R15BQ5SWA1 713 aa12.9□□□□□ -0.34
CCDC93-206ENST00000470650 POTEB3A0JP26 581 aa12.89□□□□□ -0.35
CCDC93-206ENST00000470650 FAM205CA6NFA0 338 aa12.89□□□□□ -0.35
CCDC93-206ENST00000470650 POTEBQ6S5H4 581 aa12.89□□□□□ -0.35
CCDC93-206ENST00000470650 PCDHGA4Q9Y5G9 962 aa12.87□□□□□ -0.35
CCDC93-206ENST00000470650 NUDT7P0C024 238 aa12.85□□□□□ -0.35
CCDC93-206ENST00000470650 UPF1Q92900 1129 aaKnown RBP eCLIP12.85□□□□□ -0.35
CCDC93-206ENST00000470650 DDX27Q96GQ7 796 aaKnown RBP12.85□□□□□ -0.35
CCDC93-206ENST00000470650 ZSWIM6Q9HCJ5 1215 aa12.85□□□□□ -0.35
CCDC93-206ENST00000470650 SLC34A2O95436 690 aa12.84□□□□□ -0.35
CCDC93-206ENST00000470650 TSHZ2Q9NRE2 1034 aa12.84□□□□□ -0.35
CCDC93-206ENST00000470650 HS3ST6Q96QI5 342 aa12.83□□□□□ -0.36
CCDC93-206ENST00000470650 MFSD10Q14728 455 aa12.82□□□□□ -0.36
CCDC93-206ENST00000470650 CDAN1Q8IWY9 1227 aa12.82□□□□□ -0.36
CCDC93-206ENST00000470650 ERBB3P21860 1342 aa12.82□□□□□ -0.36
CCDC93-206ENST00000470650 PTCD2Q8WV60 388 aaKnown RBP12.8□□□□□ -0.36
CCDC93-206ENST00000470650 VARS2Q5ST30 1063 aaKnown RBP12.78□□□□□ -0.36
CCDC93-206ENST00000470650 OXER1Q8TDS5 423 aa12.76□□□□□ -0.37
CCDC93-206ENST00000470650 EMILIN3Q9NT22 766 aa12.76□□□□□ -0.37
CCDC93-206ENST00000470650 LHX6Q9UPM6 363 aa12.75□□□□□ -0.37
CCDC93-206ENST00000470650 PLCB2Q00722 1185 aa12.74□□□□□ -0.37
CCDC93-206ENST00000470650 ZNF316A6NFI3 1004 aaPredicted RBP12.73□□□□□ -0.37
CCDC93-206ENST00000470650 KDM4FA0A1W2PPD8 638 aa12.72□□□□□ -0.37
CCDC93-206ENST00000470650 TBC1D12O60347 775 aa12.71□□□□□ -0.37
CCDC93-206ENST00000470650 MAP3K9P80192 1104 aa12.67□□□□□ -0.38
CCDC93-206ENST00000470650 WDR70Q9NW82 654 aa12.66□□□□□ -0.38
CCDC93-206ENST00000470650 PCDH10Q9P2E7 1040 aa12.66□□□□□ -0.38
CCDC93-206ENST00000470650 CAMK2BQ13554 666 aa12.65□□□□□ -0.38
CCDC93-206ENST00000470650 KRTAP3-3Q9BYR6 98 aa12.65□□□□□ -0.38
CCDC93-206ENST00000470650 KRTAP3-2Q9BYR7 98 aa12.65□□□□□ -0.38
CCDC93-206ENST00000470650 DPYSL4O14531 572 aa12.64□□□□□ -0.39
CCDC93-206ENST00000470650 EVI5O60447 810 aa12.64□□□□□ -0.39
CCDC93-206ENST00000470650 HAP1P54257 671 aaPredicted RBP12.63□□□□□ -0.39
CCDC93-206ENST00000470650 ZNF687Q8N1G0 1237 aa12.63□□□□□ -0.39
CCDC93-206ENST00000470650 RB1CC1Q8TDY2 1594 aa12.61□□□□□ -0.39
CCDC93-206ENST00000470650 E2F4Q16254 413 aa12.6□□□□□ -0.39
CCDC93-206ENST00000470650 PLSCR2Q9NRY7 297 aa12.6□□□□□ -0.39
CCDC93-206ENST00000470650 AXIN2Q9Y2T1 843 aa12.6□□□□□ -0.39
CCDC93-206ENST00000470650 POTEEQ6S8J3 1075 aa12.59□□□□□ -0.39
CCDC93-206ENST00000470650 ANO8Q9HCE9 1232 aaPredicted RBP12.56□□□□□ -0.4
CCDC93-206ENST00000470650 ZNF454Q8N9F8 522 aa12.55□□□□□ -0.4
CCDC93-206ENST00000470650 PSEN2P49810 448 aa12.51□□□□□ -0.41
CCDC93-206ENST00000470650 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
CCDC93-206ENST00000470650 FOSBP53539 338 aa12.5□□□□□ -0.41
CCDC93-206ENST00000470650 PSDA5PKW4 1024 aaPredicted RBP12.49□□□□□ -0.41
CCDC93-206ENST00000470650 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
CCDC93-206ENST00000470650 SPNS2Q8IVW8 549 aa12.49□□□□□ -0.41
CCDC93-206ENST00000470650 KCNV2Q8TDN2 545 aa12.48□□□□□ -0.41
CCDC93-206ENST00000470650 DDX12PQ92771 950 aa12.48□□□□□ -0.41
CCDC93-206ENST00000470650 KDM2AQ9Y2K7 1162 aa12.48□□□□□ -0.41
CCDC93-206ENST00000470650 PCDHGA10Q9Y5H3 936 aa12.47□□□□□ -0.41
CCDC93-206ENST00000470650 UNC13AQ9UPW8 1703 aa12.46□□□□□ -0.41
CCDC93-206ENST00000470650 DMRTA1Q5VZB9 504 aa12.46□□□□□ -0.41
CCDC93-206ENST00000470650 JPH4Q96JJ6 628 aa12.46□□□□□ -0.41
CCDC93-206ENST00000470650 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
CCDC93-206ENST00000470650 ADAM33Q9BZ11 813 aa12.45□□□□□ -0.42
CCDC93-206ENST00000470650 ARHGAP33O14559 1287 aa12.44□□□□□ -0.42
CCDC93-206ENST00000470650 LSM11P83369 360 aaKnown RBP eCLIP12.44□□□□□ -0.42
CCDC93-206ENST00000470650 PDIA6Q15084 440 aa12.44□□□□□ -0.42
CCDC93-206ENST00000470650 ZDHHC16Q969W1 377 aa12.43□□□□□ -0.42
CCDC93-206ENST00000470650 PBX2P40425 430 aa12.41□□□□□ -0.42
CCDC93-206ENST00000470650 NACADO15069 1562 aa12.4□□□□□ -0.42
CCDC93-206ENST00000470650 RBM33Q96EV2 1170 aaKnown RBP12.4□□□□□ -0.42
CCDC93-206ENST00000470650 ARIH1Q9Y4X5 557 aaPredicted RBP12.4□□□□□ -0.42
CCDC93-206ENST00000470650 GRXCR2A6NFK2 248 aa12.39□□□□□ -0.43
CCDC93-206ENST00000470650 SPDYE16A6NNV3 312 aaPredicted RBP12.39□□□□□ -0.43
CCDC93-206ENST00000470650 PHF14O94880 888 aa12.39□□□□□ -0.43
CCDC93-206ENST00000470650 BCL2L12Q9HB09 334 aa12.39□□□□□ -0.43
CCDC93-206ENST00000470650 PTGER2P43116 358 aa12.38□□□□□ -0.43
CCDC93-206ENST00000470650 MMRN1Q13201 1228 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms