RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 EEA1Q15075 1411 aa21.02■□□□□ 0.96
HIGD1A-205ENST00000470543 PREX1Q8TCU6 1659 aa21.02■□□□□ 0.95
HIGD1A-205ENST00000470543 CDK13Q14004 1512 aaKnown RBP21■□□□□ 0.95
HIGD1A-205ENST00000470543 SCAPERQ9BY12 1400 aa20.99■□□□□ 0.95
HIGD1A-205ENST00000470543 MYO5CQ9NQX4 1742 aa20.98■□□□□ 0.95
HIGD1A-205ENST00000470543 C9orf84Q5VXU9 1444 aa20.96■□□□□ 0.95
HIGD1A-205ENST00000470543 ARHGEF12Q9NZN5 1544 aa20.95■□□□□ 0.94
HIGD1A-205ENST00000470543 ATP10AO60312 1499 aa20.94■□□□□ 0.94
HIGD1A-205ENST00000470543 PLCH2O75038 1416 aa20.94■□□□□ 0.94
HIGD1A-205ENST00000470543 ATP1B4Q9UN42 357 aaPredicted RBP20.91■□□□□ 0.94
HIGD1A-205ENST00000470543 KIF14Q15058 1648 aa20.89■□□□□ 0.94
HIGD1A-205ENST00000470543 MYT1LQ9UL68 1186 aa20.89■□□□□ 0.93
HIGD1A-205ENST00000470543 UHRF1BP1Q6BDS2 1440 aa20.88■□□□□ 0.93
HIGD1A-205ENST00000470543 DISP3Q9P2K9 1392 aa20.88■□□□□ 0.93
HIGD1A-205ENST00000470543 EFCAB2Q5VUJ9 269 aa20.88■□□□□ 0.93
HIGD1A-205ENST00000470543 ZNF518AQ6AHZ1 1483 aa20.88■□□□□ 0.93
HIGD1A-205ENST00000470543 DMRT2Q9Y5R5 561 aa20.87■□□□□ 0.93
HIGD1A-205ENST00000470543 ARHGAP5Q13017 1502 aa20.87■□□□□ 0.93
HIGD1A-205ENST00000470543 CEBPAP49715 358 aaPredicted RBP20.85■□□□□ 0.93
HIGD1A-205ENST00000470543 CDK11AQ9UQ88 783 aaPredicted RBP20.85■□□□□ 0.93
HIGD1A-205ENST00000470543 FMN1Q68DA7 1419 aa20.85■□□□□ 0.93
HIGD1A-205ENST00000470543 STRCQ7RTU9 1775 aa20.85■□□□□ 0.93
HIGD1A-205ENST00000470543 KDM5CP41229 1560 aa20.82■□□□□ 0.92
HIGD1A-205ENST00000470543 CLIP1P30622 1438 aa20.82■□□□□ 0.92
HIGD1A-205ENST00000470543 SETD1BQ9UPS6 1966 aaKnown RBP20.82■□□□□ 0.92
HIGD1A-205ENST00000470543 DIP2CQ9Y2E4 1556 aa20.8■□□□□ 0.92
HIGD1A-205ENST00000470543 EHMT2Q96KQ7 1210 aa20.79■□□□□ 0.92
HIGD1A-205ENST00000470543 ESF1Q9H501 851 aaKnown RBP20.79■□□□□ 0.92
HIGD1A-205ENST00000470543 SPATA31D1Q6ZQQ2 1576 aa20.79■□□□□ 0.92
HIGD1A-205ENST00000470543 C3P01024 1663 aa20.78■□□□□ 0.92
HIGD1A-205ENST00000470543 ABCA6Q8N139 1617 aa20.78■□□□□ 0.92
HIGD1A-205ENST00000470543 UBTFP17480 764 aaKnown RBP20.77■□□□□ 0.92
HIGD1A-205ENST00000470543 TROQ12816 1431 aaPredicted RBP20.77■□□□□ 0.91
HIGD1A-205ENST00000470543 REREQ9P2R6 1566 aa20.76■□□□□ 0.91
HIGD1A-205ENST00000470543 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
HIGD1A-205ENST00000470543 AFAP1Q8N556 730 aa20.75■□□□□ 0.91
HIGD1A-205ENST00000470543 CDC42BPBQ9Y5S2 1711 aa20.73■□□□□ 0.91
HIGD1A-205ENST00000470543 PTPRTO14522 1441 aa20.72■□□□□ 0.91
HIGD1A-205ENST00000470543 SOCS7O14512 581 aa20.72■□□□□ 0.91
HIGD1A-205ENST00000470543 ILDR2Q71H61 639 aa20.72■□□□□ 0.91
HIGD1A-205ENST00000470543 ARHGAP35Q9NRY4 1499 aa20.72■□□□□ 0.91
HIGD1A-205ENST00000470543 PREX2Q70Z35 1606 aa20.71■□□□□ 0.91
HIGD1A-205ENST00000470543 ITSN2Q9NZM3 1697 aa20.71■□□□□ 0.91
HIGD1A-205ENST00000470543 LRRIQ1Q96JM4 1722 aa20.7■□□□□ 0.9
HIGD1A-205ENST00000470543 MLH3Q9UHC1 1453 aa20.69■□□□□ 0.9
HIGD1A-205ENST00000470543 ABCC1P33527 1531 aa20.69■□□□□ 0.9
HIGD1A-205ENST00000470543 AGLP35573 1532 aa20.68■□□□□ 0.9
HIGD1A-205ENST00000470543 CNTLNQ9NXG0 1405 aa20.67■□□□□ 0.9
HIGD1A-205ENST00000470543 TRAPPC8Q9Y2L5 1435 aa20.67■□□□□ 0.9
HIGD1A-205ENST00000470543 IQSEC2Q5JU85 1478 aa20.64■□□□□ 0.89
HIGD1A-205ENST00000470543 NCOA1Q15788 1441 aa20.63■□□□□ 0.89
HIGD1A-205ENST00000470543 KIDINS220Q9ULH0 1771 aa20.63■□□□□ 0.89
HIGD1A-205ENST00000470543 LTBP4Q8N2S1 1624 aa20.63■□□□□ 0.89
HIGD1A-205ENST00000470543 CCDC18Q5T9S5 1454 aa20.62■□□□□ 0.89
HIGD1A-205ENST00000470543 MROH2AA6NES4 1674 aa20.62■□□□□ 0.89
HIGD1A-205ENST00000470543 CAMSAP1Q5T5Y3 1602 aa20.61■□□□□ 0.89
HIGD1A-205ENST00000470543 CDC42BPAQ5VT25 1732 aa20.61■□□□□ 0.89
HIGD1A-205ENST00000470543 SUPT6HQ7KZ85 1726 aaKnown RBP20.6■□□□□ 0.89
HIGD1A-205ENST00000470543 NPATQ14207 1427 aa20.57■□□□□ 0.88
HIGD1A-205ENST00000470543 SAMD9LQ8IVG5 1584 aa20.55■□□□□ 0.88
HIGD1A-205ENST00000470543 SYCP2Q9BX26 1530 aa20.54■□□□□ 0.88
HIGD1A-205ENST00000470543 MYO3AQ8NEV4 1616 aa20.54■□□□□ 0.88
HIGD1A-205ENST00000470543 ZNF777Q9ULD5 760 aaPredicted RBP20.54■□□□□ 0.88
HIGD1A-205ENST00000470543 CLTCQ00610 1675 aaKnown RBP20.54■□□□□ 0.88
HIGD1A-205ENST00000470543 CASKIN1Q8WXD9 1431 aa20.53■□□□□ 0.88
HIGD1A-205ENST00000470543 ZNF142P52746 1687 aaPredicted RBP20.53■□□□□ 0.88
HIGD1A-205ENST00000470543 SPAG9O60271 1321 aaKnown RBP20.51■□□□□ 0.87
HIGD1A-205ENST00000470543 ATP7AQ04656 1500 aa20.5■□□□□ 0.87
HIGD1A-205ENST00000470543 UBAP1LF5GYI3 381 aa20.5■□□□□ 0.87
HIGD1A-205ENST00000470543 ZMYM3Q14202 1370 aa20.49■□□□□ 0.87
HIGD1A-205ENST00000470543 NCKAP5LQ9HCH0 1330 aa20.49■□□□□ 0.87
HIGD1A-205ENST00000470543 CEP170BQ9Y4F5 1589 aaPredicted RBP20.48■□□□□ 0.87
HIGD1A-205ENST00000470543 PHF23Q9BUL5 403 aaPredicted RBP20.48■□□□□ 0.87
HIGD1A-205ENST00000470543 FYCO1Q9BQS8 1478 aa20.48■□□□□ 0.87
HIGD1A-205ENST00000470543 ZNF335Q9H4Z2 1342 aaPredicted RBP20.48■□□□□ 0.87
HIGD1A-205ENST00000470543 PLA2R1Q13018 1463 aa20.47■□□□□ 0.87
HIGD1A-205ENST00000470543 INO80Q9ULG1 1556 aaPredicted RBP20.46■□□□□ 0.87
HIGD1A-205ENST00000470543 PLEKHH2Q8IVE3 1493 aa20.44■□□□□ 0.86
HIGD1A-205ENST00000470543 PLXNC1O60486 1568 aa20.44■□□□□ 0.86
HIGD1A-205ENST00000470543 PKD2Q13563 968 aa20.44■□□□□ 0.86
HIGD1A-205ENST00000470543 A2MP01023 1474 aa20.43■□□□□ 0.86
HIGD1A-205ENST00000470543 HNRNPMP52272 730 aaKnown RBP eCLIP20.42■□□□□ 0.86
HIGD1A-205ENST00000470543 ADGBQ8N7X0 1667 aa20.42■□□□□ 0.86
HIGD1A-205ENST00000470543 GGT6Q6P531 493 aa20.41■□□□□ 0.86
HIGD1A-205ENST00000470543 GPATCH8Q9UKJ3 1502 aaKnown RBP20.41■□□□□ 0.86
HIGD1A-205ENST00000470543 TCOF1Q13428 1488 aaKnown RBP20.4■□□□□ 0.86
HIGD1A-205ENST00000470543 PTPRKQ15262 1439 aa20.4■□□□□ 0.86
HIGD1A-205ENST00000470543 SCAF1Q9H7N4 1312 aaKnown RBP20.4■□□□□ 0.86
HIGD1A-205ENST00000470543 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
HIGD1A-205ENST00000470543 KIAA1107Q9UPP5 1409 aa20.38■□□□□ 0.85
HIGD1A-205ENST00000470543 CCNB3Q8WWL7 1395 aa20.38■□□□□ 0.85
HIGD1A-205ENST00000470543 CFDP1Q9UEE9 299 aaPredicted RBP20.38■□□□□ 0.85
HIGD1A-205ENST00000470543 POLR1AO95602 1720 aaPredicted RBP20.38■□□□□ 0.85
HIGD1A-205ENST00000470543 A2ML1A8K2U0 1454 aa20.35■□□□□ 0.85
HIGD1A-205ENST00000470543 DNMT1P26358 1616 aaKnown RBP20.33■□□□□ 0.84
HIGD1A-205ENST00000470543 MTUS2Q5JR59 1369 aa20.33■□□□□ 0.84
HIGD1A-205ENST00000470543 MED1Q15648 1581 aaPredicted RBP20.32■□□□□ 0.84
HIGD1A-205ENST00000470543 CPS1P31327 1500 aa20.31■□□□□ 0.84
HIGD1A-205ENST00000470543 PIP4K2BP78356 416 aa20.3■□□□□ 0.84
HIGD1A-205ENST00000470543 TOM1O60784 492 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms